RNA–Protein interactions for RNA: ENST00000456150.5

CSPG5-203, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 1 (best) BASIC

Gene CSPG5, Length 2,089 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-203ENST00000456150 N4BP2Q86UW6 1770 aaPredicted RBP24.82■■□□□ 1.56
CSPG5-203ENST00000456150 LTN1O94822 1766 aa24.82■■□□□ 1.56
CSPG5-203ENST00000456150 F6X3S4 739 aa24.81■■□□□ 1.56
CSPG5-203ENST00000456150 GNAI2P04899 355 aa24.81■■□□□ 1.56
CSPG5-203ENST00000456150 HSP90AA1P07900 732 aaKnown RBP24.81■■□□□ 1.56
CSPG5-203ENST00000456150 SMARCA5O60264 1052 aaPredicted RBP24.79■■□□□ 1.56
CSPG5-203ENST00000456150 FLIIQ13045 1269 aa24.79■■□□□ 1.56
CSPG5-203ENST00000456150 CADPS2Q86UW7 1296 aa24.79■■□□□ 1.56
CSPG5-203ENST00000456150 GNAI3P08754 354 aa24.79■■□□□ 1.56
CSPG5-203ENST00000456150 RABEP1Q15276 862 aa24.79■■□□□ 1.56
CSPG5-203ENST00000456150 OTUD7AQ8TE49 926 aaPredicted RBP24.79■■□□□ 1.56
CSPG5-203ENST00000456150 SDSP20132 328 aa24.78■■□□□ 1.56
CSPG5-203ENST00000456150 TAF7Q15545 349 aaPredicted RBP24.78■■□□□ 1.56
CSPG5-203ENST00000456150 DDX17Q92841 729 aaKnown RBP24.78■■□□□ 1.56
CSPG5-203ENST00000456150 PXDNLA1KZ92 1463 aa24.78■■□□□ 1.56
CSPG5-203ENST00000456150 APBB1O00213 710 aa24.77■■□□□ 1.56
CSPG5-203ENST00000456150 FKBP5Q13451 457 aaPredicted RBP24.77■■□□□ 1.56
CSPG5-203ENST00000456150 KIF1AQ12756 1690 aa24.77■■□□□ 1.56
CSPG5-203ENST00000456150 TRAK2O60296 914 aa24.77■■□□□ 1.56
CSPG5-203ENST00000456150 IL17REQ8NFR9 667 aa24.77■■□□□ 1.56
CSPG5-203ENST00000456150 OSBPL3Q9H4L5 887 aa24.77■■□□□ 1.56
CSPG5-203ENST00000456150 CD2BP2O95400 341 aaKnown RBP24.76■■□□□ 1.55
CSPG5-203ENST00000456150 LTV1Q96GA3 475 aaPredicted RBP24.76■■□□□ 1.55
CSPG5-203ENST00000456150 GBP4Q96PP9 640 aa24.76■■□□□ 1.55
CSPG5-203ENST00000456150 USP26Q9BXU7 913 aa24.76■■□□□ 1.55
CSPG5-203ENST00000456150 RAB3GAP1Q15042 981 aa24.76■■□□□ 1.55
CSPG5-203ENST00000456150 KRT28Q7Z3Y7 464 aa24.75■■□□□ 1.55
CSPG5-203ENST00000456150 RBM42Q9BTD8 480 aaKnown RBP24.75■■□□□ 1.55
CSPG5-203ENST00000456150 PTMSP20962 102 aa24.74■■□□□ 1.55
CSPG5-203ENST00000456150 IP6K1Q92551 441 aa24.74■■□□□ 1.55
CSPG5-203ENST00000456150 TNPO1Q92973 898 aaKnown RBP24.74■■□□□ 1.55
CSPG5-203ENST00000456150 NFAT5O94916 1531 aa24.74■■□□□ 1.55
CSPG5-203ENST00000456150 TRPM3Q9HCF6 1732 aaPredicted RBP24.73■■□□□ 1.55
CSPG5-203ENST00000456150 REC8O95072 547 aa24.73■■□□□ 1.55
CSPG5-203ENST00000456150 PLEKHG5O94827 1062 aa24.71■■□□□ 1.55
CSPG5-203ENST00000456150 PDE1AP54750 535 aa24.71■■□□□ 1.55
CSPG5-203ENST00000456150 PHRF1Q9P1Y6 1649 aaKnown RBP24.71■■□□□ 1.55
CSPG5-203ENST00000456150 GOLGA6L3A6NEY3 463 aa24.71■■□□□ 1.55
CSPG5-203ENST00000456150 ATP8B2P98198 1209 aa24.7■■□□□ 1.54
CSPG5-203ENST00000456150 LMOD2Q6P5Q4 547 aa24.7■■□□□ 1.54
CSPG5-203ENST00000456150 LRRCC1Q9C099 1032 aa24.7■■□□□ 1.54
CSPG5-203ENST00000456150 RTN4Q9NQC3 1192 aaKnown RBP24.7■■□□□ 1.54
CSPG5-203ENST00000456150 CEMIPQ8WUJ3 1361 aa24.69■■□□□ 1.54
CSPG5-203ENST00000456150 MED1Q15648 1581 aaPredicted RBP24.69■■□□□ 1.54
CSPG5-203ENST00000456150 KCNH5Q8NCM2 988 aa24.69■■□□□ 1.54
CSPG5-203ENST00000456150 NECTIN2Q92692 538 aa24.69■■□□□ 1.54
CSPG5-203ENST00000456150 CHMP4AQ9BY43 222 aa24.69■■□□□ 1.54
CSPG5-203ENST00000456150 FSD2A1L4K1 749 aa24.68■■□□□ 1.54
CSPG5-203ENST00000456150 ERC2O15083 957 aa24.68■■□□□ 1.54
CSPG5-203ENST00000456150 USHBP1Q8N6Y0 703 aa24.68■■□□□ 1.54
CSPG5-203ENST00000456150 TUBGCP6Q96RT7 1819 aa24.68■■□□□ 1.54
CSPG5-203ENST00000456150 HDGFL1Q5TGJ6 251 aa24.68■■□□□ 1.54
CSPG5-203ENST00000456150 EXOC6BQ9Y2D4 811 aa24.68■■□□□ 1.54
CSPG5-203ENST00000456150 GZF1Q9H116 711 aaPredicted RBP24.67■■□□□ 1.54
CSPG5-203ENST00000456150 IBTKQ9P2D0 1353 aaPredicted RBP24.67■■□□□ 1.54
CSPG5-203ENST00000456150 BRINP3Q76B58 766 aa24.66■■□□□ 1.54
CSPG5-203ENST00000456150 FOXD4L1Q9NU39 408 aa24.66■■□□□ 1.54
CSPG5-203ENST00000456150 KDM3BQ7LBC6 1761 aa24.66■■□□□ 1.54
CSPG5-203ENST00000456150 SALL3Q9BXA9 1300 aa24.66■■□□□ 1.54
CSPG5-203ENST00000456150 SKOR2Q2VWA4 1001 aaPredicted RBP24.66■■□□□ 1.54
CSPG5-203ENST00000456150 LMO7Q8WWI1 1683 aa24.65■■□□□ 1.54
CSPG5-203ENST00000456150 ST18O60284 1047 aa24.65■■□□□ 1.54
CSPG5-203ENST00000456150 HOXB7P09629 217 aa24.65■■□□□ 1.54
CSPG5-203ENST00000456150 SLAIN2Q9P270 581 aa24.65■■□□□ 1.54
CSPG5-203ENST00000456150 PNMA6EA0A0J9YXQ4 647 aa24.64■■□□□ 1.53
CSPG5-203ENST00000456150 UBTFL1P0CB47 393 aaPredicted RBP24.64■■□□□ 1.53
CSPG5-203ENST00000456150 ISY1Q9ULR0 285 aaKnown RBP24.64■■□□□ 1.53
CSPG5-203ENST00000456150 NBPF6Q5VWK0 638 aa24.63■■□□□ 1.53
CSPG5-203ENST00000456150 NBPF4Q96M43 638 aa24.63■■□□□ 1.53
CSPG5-203ENST00000456150 SRCIN1Q9C0H9 1055 aa24.63■■□□□ 1.53
CSPG5-203ENST00000456150 LRRFIP2Q9Y608 721 aaKnown RBP24.63■■□□□ 1.53
CSPG5-203ENST00000456150 ALS2Q96Q42 1657 aa24.63■■□□□ 1.53
CSPG5-203ENST00000456150 MX1P20591 662 aa24.63■■□□□ 1.53
CSPG5-203ENST00000456150 CLEC17AQ6ZS10 378 aa24.63■■□□□ 1.53
CSPG5-203ENST00000456150 NPHP3Q7Z494 1330 aa24.63■■□□□ 1.53
CSPG5-203ENST00000456150 USP44Q9H0E7 712 aa24.62■■□□□ 1.53
CSPG5-203ENST00000456150 RGPD2P0DJD1 1756 aa24.62■■□□□ 1.53
CSPG5-203ENST00000456150 PXDNQ92626 1479 aa24.61■■□□□ 1.53
CSPG5-203ENST00000456150 GOLGA6L22H0YM25 854 aa24.61■■□□□ 1.53
CSPG5-203ENST00000456150 GCP02774 474 aa24.6■■□□□ 1.53
CSPG5-203ENST00000456150 EIF4A1P60842 406 aaKnown RBP24.6■■□□□ 1.53
CSPG5-203ENST00000456150 STAP2Q9UGK3 403 aa24.6■■□□□ 1.53
CSPG5-203ENST00000456150 SLIT3O75094 1523 aa24.6■■□□□ 1.53
CSPG5-203ENST00000456150 AOX1Q06278 1338 aa24.6■■□□□ 1.53
CSPG5-203ENST00000456150 AKAP4Q5JQC9 854 aa24.6■■□□□ 1.53
CSPG5-203ENST00000456150 ZBTB7CA1YPR0 619 aa24.59■■□□□ 1.53
CSPG5-203ENST00000456150 NUCB2P80303 420 aa24.59■■□□□ 1.53
CSPG5-203ENST00000456150 CWC22Q9HCG8 908 aaKnown RBP24.59■■□□□ 1.53
CSPG5-203ENST00000456150 SSFA2P28290 1259 aa24.58■■□□□ 1.53
CSPG5-203ENST00000456150 MRE11P49959 708 aa24.58■■□□□ 1.53
CSPG5-203ENST00000456150 PLEKHO1Q53GL0 409 aaPredicted RBP24.58■■□□□ 1.53
CSPG5-203ENST00000456150 FAM43AQ8N2R8 423 aa24.58■■□□□ 1.53
CSPG5-203ENST00000456150 PHAXQ9H814 394 aaKnown RBP24.58■■□□□ 1.53
CSPG5-203ENST00000456150 XRCC6P12956 609 aaKnown RBP eCLIP24.58■■□□□ 1.53
CSPG5-203ENST00000456150 SSH3Q8TE77 659 aa24.58■■□□□ 1.53
CSPG5-203ENST00000456150 NCAPD2Q15021 1401 aa24.58■■□□□ 1.52
CSPG5-203ENST00000456150 TEFQ10587 303 aa24.57■■□□□ 1.52
CSPG5-203ENST00000456150 AMOTQ4VCS5 1084 aa24.57■■□□□ 1.52
CSPG5-203ENST00000456150 RAB11FIP3O75154 756 aa24.57■■□□□ 1.52
CSPG5-203ENST00000456150 ESYT1Q9BSJ8 1104 aa24.57■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms