RNA–Protein interactions for RNA: ENST00000455954.2

CHCHD4P3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4 pseudogene 3, humanhuman

BASIC

Gene CHCHD4P3, Length 410 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4P3-201ENST00000455954 OVOS2A0A0G2JMS6 1433 aa12.59□□□□□ -0.39
CHCHD4P3-201ENST00000455954 WNK3Q9BYP7 1800 aa12.58□□□□□ -0.4
CHCHD4P3-201ENST00000455954 APBA3O96018 575 aa12.58□□□□□ -0.4
CHCHD4P3-201ENST00000455954 MRE11P49959 708 aa12.58□□□□□ -0.4
CHCHD4P3-201ENST00000455954 MARCH10Q8NA82 808 aaPredicted RBP12.58□□□□□ -0.4
CHCHD4P3-201ENST00000455954 PANK1Q8TE04 598 aa12.58□□□□□ -0.4
CHCHD4P3-201ENST00000455954 CFAP53Q96M91 514 aa12.58□□□□□ -0.4
CHCHD4P3-201ENST00000455954 KIF24Q5T7B8 1368 aa12.57□□□□□ -0.4
CHCHD4P3-201ENST00000455954 MVPQ14764 893 aaKnown RBP12.57□□□□□ -0.4
CHCHD4P3-201ENST00000455954 TNS1Q9HBL0 1735 aaKnown RBP12.57□□□□□ -0.4
CHCHD4P3-201ENST00000455954 BCL9O00512 1426 aa12.56□□□□□ -0.4
CHCHD4P3-201ENST00000455954 EIF5BO60841 1220 aaKnown RBP12.56□□□□□ -0.4
CHCHD4P3-201ENST00000455954 GLIPR1L2Q4G1C9 344 aa12.56□□□□□ -0.4
CHCHD4P3-201ENST00000455954 ZKSCAN2Q63HK3 967 aa12.56□□□□□ -0.4
CHCHD4P3-201ENST00000455954 SNX21Q969T3 373 aa12.56□□□□□ -0.4
CHCHD4P3-201ENST00000455954 RRAGDQ9NQL2 400 aaPredicted RBP12.56□□□□□ -0.4
CHCHD4P3-201ENST00000455954 PCDHB15Q9Y5E8 787 aa12.56□□□□□ -0.4
CHCHD4P3-201ENST00000455954 FAM208AQ9UK61 1670 aaKnown RBP12.56□□□□□ -0.4
CHCHD4P3-201ENST00000455954 PEAK1Q9H792 1746 aa12.56□□□□□ -0.4
CHCHD4P3-201ENST00000455954 IL16Q14005 1332 aa12.56□□□□□ -0.4
CHCHD4P3-201ENST00000455954 FLT4P35916 1363 aa12.56□□□□□ -0.4
CHCHD4P3-201ENST00000455954 TNS2Q63HR2 1409 aa12.55□□□□□ -0.4
CHCHD4P3-201ENST00000455954 EZH2Q15910 746 aaKnown RBP12.55□□□□□ -0.4
CHCHD4P3-201ENST00000455954 HSP90AB2PQ58FF8 381 aa12.55□□□□□ -0.4
CHCHD4P3-201ENST00000455954 MORC1Q86VD1 984 aa12.55□□□□□ -0.4
CHCHD4P3-201ENST00000455954 CAMKK2Q96RR4 588 aa12.55□□□□□ -0.4
CHCHD4P3-201ENST00000455954 SLKQ9H2G2 1235 aaPredicted RBP12.55□□□□□ -0.4
CHCHD4P3-201ENST00000455954 KIF16BQ96L93 1317 aa12.55□□□□□ -0.4
CHCHD4P3-201ENST00000455954 XRCC6P12956 609 aaKnown RBP eCLIP12.54□□□□□ -0.4
CHCHD4P3-201ENST00000455954 C22orf23Q9BZE7 217 aa12.54□□□□□ -0.4
CHCHD4P3-201ENST00000455954 BCL11BQ9C0K0 894 aaPredicted RBP12.54□□□□□ -0.4
CHCHD4P3-201ENST00000455954 EMILIN1Q9Y6C2 1016 aa12.54□□□□□ -0.4
CHCHD4P3-201ENST00000455954 SKOR2Q2VWA4 1001 aaPredicted RBP12.53□□□□□ -0.4
CHCHD4P3-201ENST00000455954 NBPF6Q5VWK0 638 aa12.53□□□□□ -0.4
CHCHD4P3-201ENST00000455954 HSCBQ8IWL3 235 aa12.53□□□□□ -0.4
CHCHD4P3-201ENST00000455954 SMC5Q8IY18 1101 aa12.53□□□□□ -0.4
CHCHD4P3-201ENST00000455954 NBPF4Q96M43 638 aa12.53□□□□□ -0.4
CHCHD4P3-201ENST00000455954 PNNQ9H307 717 aaKnown RBP12.53□□□□□ -0.4
CHCHD4P3-201ENST00000455954 DDX19BQ9UMR2 479 aa12.53□□□□□ -0.4
CHCHD4P3-201ENST00000455954 EP400Q96L91 3159 aa12.53□□□□□ -0.4
CHCHD4P3-201ENST00000455954 TRAK2O60296 914 aa12.52□□□□□ -0.41
CHCHD4P3-201ENST00000455954 DDIT3P35638 169 aa12.52□□□□□ -0.41
CHCHD4P3-201ENST00000455954 RBM25P49756 843 aaKnown RBP12.52□□□□□ -0.41
CHCHD4P3-201ENST00000455954 DZIP1LQ8IYY4 767 aaKnown RBP12.52□□□□□ -0.41
CHCHD4P3-201ENST00000455954 PLSCR1O15162 318 aa12.51□□□□□ -0.41
CHCHD4P3-201ENST00000455954 RLBP1P12271 317 aa12.51□□□□□ -0.41
CHCHD4P3-201ENST00000455954 TNNT2P45379 298 aaPredicted RBP12.51□□□□□ -0.41
CHCHD4P3-201ENST00000455954 POLKQ9UBT6 870 aa12.51□□□□□ -0.41
CHCHD4P3-201ENST00000455954 COL3A1P02461 1466 aaPredicted RBP12.51□□□□□ -0.41
CHCHD4P3-201ENST00000455954 SBF2Q86WG5 1849 aa12.51□□□□□ -0.41
CHCHD4P3-201ENST00000455954 RRP9O43818 475 aaKnown RBP12.5□□□□□ -0.41
CHCHD4P3-201ENST00000455954 PTF1AQ7RTS3 328 aa12.5□□□□□ -0.41
CHCHD4P3-201ENST00000455954 DDX54Q8TDD1 881 aaKnown RBP12.5□□□□□ -0.41
CHCHD4P3-201ENST00000455954 RAPGEF4Q8WZA2 1011 aa12.5□□□□□ -0.41
CHCHD4P3-201ENST00000455954 CHMP4BQ9H444 224 aaKnown RBP12.5□□□□□ -0.41
CHCHD4P3-201ENST00000455954 IBTKQ9P2D0 1353 aaPredicted RBP12.5□□□□□ -0.41
CHCHD4P3-201ENST00000455954 RGPD2P0DJD1 1756 aa12.49□□□□□ -0.41
CHCHD4P3-201ENST00000455954 FTSJ3Q8IY81 847 aaKnown RBP12.49□□□□□ -0.41
CHCHD4P3-201ENST00000455954 USHBP1Q8N6Y0 703 aa12.49□□□□□ -0.41
CHCHD4P3-201ENST00000455954 ZCRB1Q8TBF4 217 aaKnown RBP12.49□□□□□ -0.41
CHCHD4P3-201ENST00000455954 ZNF428Q96B54 188 aa12.49□□□□□ -0.41
CHCHD4P3-201ENST00000455954 CFAP44Q96MT7 982 aa12.49□□□□□ -0.41
CHCHD4P3-201ENST00000455954 GBP4Q96PP9 640 aa12.49□□□□□ -0.41
CHCHD4P3-201ENST00000455954 PSDA5PKW4 1024 aaPredicted RBP12.48□□□□□ -0.41
CHCHD4P3-201ENST00000455954 KCNQ2O43526 872 aa12.48□□□□□ -0.41
CHCHD4P3-201ENST00000455954 TATP17735 454 aaPredicted RBP12.48□□□□□ -0.41
CHCHD4P3-201ENST00000455954 NBPF14Q5TI25 921 aa12.48□□□□□ -0.41
CHCHD4P3-201ENST00000455954 ACSBG1Q96GR2 724 aa12.48□□□□□ -0.41
CHCHD4P3-201ENST00000455954 GRPEL1Q9HAV7 217 aa12.48□□□□□ -0.41
CHCHD4P3-201ENST00000455954 MAP2P11137 1827 aaKnown RBP12.48□□□□□ -0.41
CHCHD4P3-201ENST00000455954 MEGF6O75095 1541 aa12.47□□□□□ -0.41
CHCHD4P3-201ENST00000455954 IPO8O15397 1037 aaKnown RBP12.47□□□□□ -0.41
CHCHD4P3-201ENST00000455954 BRPF1P55201 1214 aaPredicted RBP12.47□□□□□ -0.41
CHCHD4P3-201ENST00000455954 R3HDM1Q15032 1099 aaKnown RBP12.47□□□□□ -0.41
CHCHD4P3-201ENST00000455954 RREB1Q92766 1687 aa12.46□□□□□ -0.41
CHCHD4P3-201ENST00000455954 TPM2P07951 284 aa12.46□□□□□ -0.41
CHCHD4P3-201ENST00000455954 ALDH1L2Q3SY69 923 aa12.46□□□□□ -0.41
CHCHD4P3-201ENST00000455954 CLEC17AQ6ZS10 378 aa12.46□□□□□ -0.41
CHCHD4P3-201ENST00000455954 RGPD3A6NKT7 1758 aaPredicted RBP12.46□□□□□ -0.42
CHCHD4P3-201ENST00000455954 RGPD4Q7Z3J3 1758 aa12.46□□□□□ -0.42
CHCHD4P3-201ENST00000455954 NHSQ6T4R5 1651 aa12.45□□□□□ -0.42
CHCHD4P3-201ENST00000455954 HSP90AA1P07900 732 aaKnown RBP12.45□□□□□ -0.42
CHCHD4P3-201ENST00000455954 RAB3GAP1Q15042 981 aa12.45□□□□□ -0.42
CHCHD4P3-201ENST00000455954 ATF7IPQ6VMQ6 1270 aa12.45□□□□□ -0.42
CHCHD4P3-201ENST00000455954 EYA1Q99502 592 aa12.45□□□□□ -0.42
CHCHD4P3-201ENST00000455954 NCAPD2Q15021 1401 aa12.45□□□□□ -0.42
CHCHD4P3-201ENST00000455954 ESPNB1AK53 854 aa12.44□□□□□ -0.42
CHCHD4P3-201ENST00000455954 MTHFSP49914 203 aa12.44□□□□□ -0.42
CHCHD4P3-201ENST00000455954 MFAP1P55081 439 aaKnown RBP12.44□□□□□ -0.42
CHCHD4P3-201ENST00000455954 EIF4A2Q14240 407 aaKnown RBP12.44□□□□□ -0.42
CHCHD4P3-201ENST00000455954 TXNRD1Q16881 649 aa12.44□□□□□ -0.42
CHCHD4P3-201ENST00000455954 BMP2KLQ5H9B9 411 aa12.44□□□□□ -0.42
CHCHD4P3-201ENST00000455954 PROM2Q8N271 834 aa12.44□□□□□ -0.42
CHCHD4P3-201ENST00000455954 SMC4Q9NTJ3 1288 aa12.44□□□□□ -0.42
CHCHD4P3-201ENST00000455954 NUP188Q5SRE5 1749 aa12.44□□□□□ -0.42
CHCHD4P3-201ENST00000455954 PCDH11XQ9BZA7 1347 aa12.43□□□□□ -0.42
CHCHD4P3-201ENST00000455954 PCDH11YQ9BZA8 1340 aa12.43□□□□□ -0.42
CHCHD4P3-201ENST00000455954 PRIM1P49642 420 aaKnown RBP12.43□□□□□ -0.42
CHCHD4P3-201ENST00000455954 TERF1P54274 439 aa12.43□□□□□ -0.42
CHCHD4P3-201ENST00000455954 NUCB1Q02818 461 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms