RNA–Protein interactions for RNA: ENST00000455359.5

HMGXB4-204, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 1,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-204ENST00000455359 NHSQ6T4R5 1651 aa18.73■□□□□ 0.59
HMGXB4-204ENST00000455359 ATG3Q9NT62 314 aa18.72■□□□□ 0.59
HMGXB4-204ENST00000455359 BTBD11A6QL63 1104 aa18.71■□□□□ 0.59
HMGXB4-204ENST00000455359 WDR63Q8IWG1 891 aa18.71■□□□□ 0.59
HMGXB4-204ENST00000455359 WWC1Q8IX03 1113 aa18.71■□□□□ 0.59
HMGXB4-204ENST00000455359 SLC27A3Q5K4L6 730 aa18.7■□□□□ 0.58
HMGXB4-204ENST00000455359 CAMKK2Q96RR4 588 aa18.7■□□□□ 0.58
HMGXB4-204ENST00000455359 THUMPD2Q9BTF0 503 aaKnown RBP18.7■□□□□ 0.58
HMGXB4-204ENST00000455359 ASAP1Q9ULH1 1129 aa18.7■□□□□ 0.58
HMGXB4-204ENST00000455359 IL16Q14005 1332 aa18.7■□□□□ 0.58
HMGXB4-204ENST00000455359 PALLDQ8WX93 1383 aa18.69■□□□□ 0.58
HMGXB4-204ENST00000455359 DOT1LQ8TEK3 1739 aa18.69■□□□□ 0.58
HMGXB4-204ENST00000455359 ZNF790Q6PG37 636 aa18.69■□□□□ 0.58
HMGXB4-204ENST00000455359 TTC5Q8N0Z6 440 aa18.69■□□□□ 0.58
HMGXB4-204ENST00000455359 CFAP44Q96MT7 982 aa18.69■□□□□ 0.58
HMGXB4-204ENST00000455359 TOGARAM1Q9Y4F4 1720 aa18.68■□□□□ 0.58
HMGXB4-204ENST00000455359 IFT57Q9NWB7 429 aa18.68■□□□□ 0.58
HMGXB4-204ENST00000455359 SCN11AQ9UI33 1791 aa18.67■□□□□ 0.58
HMGXB4-204ENST00000455359 CHL1O00533 1208 aa18.67■□□□□ 0.58
HMGXB4-204ENST00000455359 GNAI1P63096 354 aa18.67■□□□□ 0.58
HMGXB4-204ENST00000455359 EN1Q05925 392 aaPredicted RBP18.67■□□□□ 0.58
HMGXB4-204ENST00000455359 SBF2Q86WG5 1849 aa18.66■□□□□ 0.58
HMGXB4-204ENST00000455359 LOC102724428A0A0B4J2F2 783 aa18.66■□□□□ 0.58
HMGXB4-204ENST00000455359 ZNF853P0CG23 659 aa18.66■□□□□ 0.58
HMGXB4-204ENST00000455359 SIK1P57059 783 aa18.66■□□□□ 0.58
HMGXB4-204ENST00000455359 TXNRD1Q16881 649 aa18.66■□□□□ 0.58
HMGXB4-204ENST00000455359 DEFB132Q7Z7B7 95 aa18.66■□□□□ 0.58
HMGXB4-204ENST00000455359 VSIG10Q8N0Z9 540 aa18.66■□□□□ 0.58
HMGXB4-204ENST00000455359 ZNF521Q96K83 1311 aa18.66■□□□□ 0.58
HMGXB4-204ENST00000455359 FMNL2Q96PY5 1086 aa18.65■□□□□ 0.58
HMGXB4-204ENST00000455359 TSPYL4Q9UJ04 414 aa18.65■□□□□ 0.58
HMGXB4-204ENST00000455359 SLC39A6Q13433 755 aa18.64■□□□□ 0.57
HMGXB4-204ENST00000455359 PROM2Q8N271 834 aa18.64■□□□□ 0.57
HMGXB4-204ENST00000455359 CCNL1Q9UK58 526 aaPredicted RBP18.64■□□□□ 0.57
HMGXB4-204ENST00000455359 TNS1Q9HBL0 1735 aaKnown RBP18.63■□□□□ 0.57
HMGXB4-204ENST00000455359 EZH2Q15910 746 aaKnown RBP18.63■□□□□ 0.57
HMGXB4-204ENST00000455359 TEX13AQ9BXU3 409 aaPredicted RBP18.63■□□□□ 0.57
HMGXB4-204ENST00000455359 ZNF496Q96IT1 587 aaPredicted RBP18.62■□□□□ 0.57
HMGXB4-204ENST00000455359 RBM42Q9BTD8 480 aaKnown RBP18.62■□□□□ 0.57
HMGXB4-204ENST00000455359 SALL2Q9Y467 1007 aaPredicted RBP18.62■□□□□ 0.57
HMGXB4-204ENST00000455359 BTAF1O14981 1849 aa18.62■□□□□ 0.57
HMGXB4-204ENST00000455359 PTCD1O75127 700 aaKnown RBP18.61■□□□□ 0.57
HMGXB4-204ENST00000455359 ATP6V1AP38606 617 aa18.61■□□□□ 0.57
HMGXB4-204ENST00000455359 HNRNPUQ00839 825 aaKnown RBP eCLIP18.61■□□□□ 0.57
HMGXB4-204ENST00000455359 MIS18AQ9NYP9 233 aa18.61■□□□□ 0.57
HMGXB4-204ENST00000455359 KAT6BQ8WYB5 2073 aa18.61■□□□□ 0.57
HMGXB4-204ENST00000455359 ITGB4P16144 1822 aa18.6■□□□□ 0.57
HMGXB4-204ENST00000455359 EIF4A1P60842 406 aaKnown RBP18.6■□□□□ 0.57
HMGXB4-204ENST00000455359 GOLGA2Q08379 1002 aa18.6■□□□□ 0.57
HMGXB4-204ENST00000455359 MYH16Q9H6N6 1097 aa18.6■□□□□ 0.57
HMGXB4-204ENST00000455359 LAS1LQ9Y4W2 734 aaKnown RBP18.6■□□□□ 0.57
HMGXB4-204ENST00000455359 RGPD3A6NKT7 1758 aaPredicted RBP18.6■□□□□ 0.57
HMGXB4-204ENST00000455359 RGPD4Q7Z3J3 1758 aa18.6■□□□□ 0.57
HMGXB4-204ENST00000455359 HEG1Q9ULI3 1381 aa18.6■□□□□ 0.57
HMGXB4-204ENST00000455359 DLG5Q8TDM6 1919 aa18.59■□□□□ 0.57
HMGXB4-204ENST00000455359 SENP3-EIF4A1A0A087X0R7 540 aa18.59■□□□□ 0.57
HMGXB4-204ENST00000455359 KCNQ3O43525 872 aa18.59■□□□□ 0.57
HMGXB4-204ENST00000455359 SNRPA1P09661 255 aaKnown RBP18.59■□□□□ 0.57
HMGXB4-204ENST00000455359 MBIPQ9NS73 344 aa18.59■□□□□ 0.57
HMGXB4-204ENST00000455359 SOS1Q07889 1333 aaPredicted RBP18.58■□□□□ 0.57
HMGXB4-204ENST00000455359 E9PSI1 815 aa18.58■□□□□ 0.57
HMGXB4-204ENST00000455359 SLC4A9Q96Q91 983 aa18.58■□□□□ 0.57
HMGXB4-204ENST00000455359 LRRC4BQ9NT99 713 aa18.58■□□□□ 0.57
HMGXB4-204ENST00000455359 KCPQ6ZWJ8 1503 aa18.58■□□□□ 0.56
HMGXB4-204ENST00000455359 STARD3NLO95772 234 aa18.57■□□□□ 0.56
HMGXB4-204ENST00000455359 HOXB7P09629 217 aa18.57■□□□□ 0.56
HMGXB4-204ENST00000455359 NBPF14Q5TI25 921 aa18.57■□□□□ 0.56
HMGXB4-204ENST00000455359 CHMP4AQ9BY43 222 aa18.57■□□□□ 0.56
HMGXB4-204ENST00000455359 SIPA1L3O60292 1781 aaPredicted RBP18.57■□□□□ 0.56
HMGXB4-204ENST00000455359 PAPPAQ13219 1627 aa18.57■□□□□ 0.56
HMGXB4-204ENST00000455359 ZBED9Q6R2W3 1325 aa18.57■□□□□ 0.56
HMGXB4-204ENST00000455359 GIGYF1O75420 1035 aaPredicted RBP18.56■□□□□ 0.56
HMGXB4-204ENST00000455359 ITPK1Q13572 414 aa18.56■□□□□ 0.56
HMGXB4-204ENST00000455359 RC3H1Q5TC82 1133 aaKnown RBP18.56■□□□□ 0.56
HMGXB4-204ENST00000455359 CNTNAP4Q9C0A0 1308 aa18.55■□□□□ 0.56
HMGXB4-204ENST00000455359 DNAJC10Q8IXB1 793 aa18.54■□□□□ 0.56
HMGXB4-204ENST00000455359 ZNF831Q5JPB2 1677 aa18.54■□□□□ 0.56
HMGXB4-204ENST00000455359 CYP19A1P11511 503 aaPredicted RBP18.53■□□□□ 0.56
HMGXB4-204ENST00000455359 SLFN5Q08AF3 891 aa18.53■□□□□ 0.56
HMGXB4-204ENST00000455359 LINC00116Q8NCU8 138 aa18.53■□□□□ 0.56
HMGXB4-204ENST00000455359 STK32BQ9NY57 414 aa18.53■□□□□ 0.56
HMGXB4-204ENST00000455359 FANCIQ9NVI1 1328 aa18.53■□□□□ 0.56
HMGXB4-204ENST00000455359 AKT1S1Q96B36 256 aa18.52■□□□□ 0.56
HMGXB4-204ENST00000455359 SPINK5Q9NQ38 1064 aaPredicted RBP18.52■□□□□ 0.56
HMGXB4-204ENST00000455359 LY75O60449 1722 aa18.52■□□□□ 0.56
HMGXB4-204ENST00000455359 KCNQ4P56696 695 aa18.51■□□□□ 0.55
HMGXB4-204ENST00000455359 TRMT2AQ8IZ69 625 aaKnown RBP18.51■□□□□ 0.55
HMGXB4-204ENST00000455359 TSR2Q969E8 191 aaKnown RBP18.51■□□□□ 0.55
HMGXB4-204ENST00000455359 ERBB4Q15303 1308 aa18.51■□□□□ 0.55
HMGXB4-204ENST00000455359 CICQ96RK0 1608 aaPredicted RBP18.51■□□□□ 0.55
HMGXB4-204ENST00000455359 SLC15A2Q16348 729 aa18.5■□□□□ 0.55
HMGXB4-204ENST00000455359 FLAD1Q8NFF5 587 aa18.5■□□□□ 0.55
HMGXB4-204ENST00000455359 AK7Q96M32 723 aa18.5■□□□□ 0.55
HMGXB4-204ENST00000455359 CCDC87Q9NVE4 849 aa18.5■□□□□ 0.55
HMGXB4-204ENST00000455359 UBR2Q8IWV8 1755 aa18.5■□□□□ 0.55
HMGXB4-204ENST00000455359 CRKLP46109 303 aaKnown RBP18.49■□□□□ 0.55
HMGXB4-204ENST00000455359 DUSP27Q5VZP5 1158 aa18.49■□□□□ 0.55
HMGXB4-204ENST00000455359 USP16Q9Y5T5 823 aa18.49■□□□□ 0.55
HMGXB4-204ENST00000455359 KDM3BQ7LBC6 1761 aa18.49■□□□□ 0.55
HMGXB4-204ENST00000455359 VIRMAQ69YN4 1812 aaKnown RBP18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms