RNA–Protein interactions for RNA: ENST00000455228.1

LINC01940-201, Transcript of long intergenic non-protein coding RNA 1940, humanhuman

TSL 2 BASIC

Gene LINC01940, Length 3,489 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01940-201ENST00000455228 VWDEQ8N2E2 1590 aa11.63□□□□□ -0.55
LINC01940-201ENST00000455228 NASPP49321 788 aaPredicted RBP11.63□□□□□ -0.55
LINC01940-201ENST00000455228 ALDH1L2Q3SY69 923 aa11.63□□□□□ -0.55
LINC01940-201ENST00000455228 NRXN1Q9ULB1 1477 aa11.63□□□□□ -0.55
LINC01940-201ENST00000455228 REC8O95072 547 aa11.62□□□□□ -0.55
LINC01940-201ENST00000455228 TBC1D9Q6ZT07 1266 aa11.62□□□□□ -0.55
LINC01940-201ENST00000455228 CTNNA3Q9UI47 895 aa11.62□□□□□ -0.55
LINC01940-201ENST00000455228 RPGRIP1LQ68CZ1 1315 aa11.62□□□□□ -0.55
LINC01940-201ENST00000455228 SETBP1Q9Y6X0 1596 aa11.62□□□□□ -0.55
LINC01940-201ENST00000455228 CD109Q6YHK3 1445 aa11.62□□□□□ -0.55
LINC01940-201ENST00000455228 EFCAB6Q5THR3 1501 aa11.62□□□□□ -0.55
LINC01940-201ENST00000455228 RBM42Q9BTD8 480 aaKnown RBP11.62□□□□□ -0.55
LINC01940-201ENST00000455228 ELL2O00472 640 aaPredicted RBP11.62□□□□□ -0.55
LINC01940-201ENST00000455228 SSFA2P28290 1259 aa11.62□□□□□ -0.55
LINC01940-201ENST00000455228 NBPF3Q9H094 633 aa11.62□□□□□ -0.55
LINC01940-201ENST00000455228 CYP2C19P33261 490 aa11.61□□□□□ -0.55
LINC01940-201ENST00000455228 CD2BP2O95400 341 aaKnown RBP11.61□□□□□ -0.55
LINC01940-201ENST00000455228 TBC1D22AQ8WUA7 517 aa11.61□□□□□ -0.55
LINC01940-201ENST00000455228 MROH2AA6NES4 1674 aa11.61□□□□□ -0.55
LINC01940-201ENST00000455228 RAD51AP2Q09MP3 1159 aa11.61□□□□□ -0.55
LINC01940-201ENST00000455228 SUGP1Q8IWZ8 645 aaKnown RBP11.61□□□□□ -0.55
LINC01940-201ENST00000455228 BCL2L12Q9HB09 334 aa11.61□□□□□ -0.55
LINC01940-201ENST00000455228 A0A1W2PP64 1363 aa11.6□□□□□ -0.55
LINC01940-201ENST00000455228 PAXBP1Q9Y5B6 917 aa11.6□□□□□ -0.55
LINC01940-201ENST00000455228 ARAP3Q8WWN8 1544 aa11.6□□□□□ -0.55
LINC01940-201ENST00000455228 CDC45O75419 566 aa11.6□□□□□ -0.55
LINC01940-201ENST00000455228 INHBEP58166 350 aa11.6□□□□□ -0.55
LINC01940-201ENST00000455228 XPCQ01831 940 aaPredicted RBP11.6□□□□□ -0.55
LINC01940-201ENST00000455228 MINK1Q8N4C8 1332 aaPredicted RBP11.59□□□□□ -0.55
LINC01940-201ENST00000455228 FYB1O15117 783 aa11.59□□□□□ -0.55
LINC01940-201ENST00000455228 PRKAR2BP31323 418 aa11.59□□□□□ -0.55
LINC01940-201ENST00000455228 PLCB2Q00722 1185 aa11.59□□□□□ -0.55
LINC01940-201ENST00000455228 HDGFL2Q7Z4V5 671 aaPredicted RBP11.59□□□□□ -0.55
LINC01940-201ENST00000455228 GAS2L2Q8NHY3 880 aa11.59□□□□□ -0.55
LINC01940-201ENST00000455228 ZBTB9Q96C00 473 aa11.59□□□□□ -0.55
LINC01940-201ENST00000455228 INO80Q9ULG1 1556 aaPredicted RBP11.59□□□□□ -0.55
LINC01940-201ENST00000455228 ZNF428Q96B54 188 aa11.59□□□□□ -0.55
LINC01940-201ENST00000455228 KIF2CQ99661 725 aa11.59□□□□□ -0.55
LINC01940-201ENST00000455228 ZBTB7BO15156 539 aaPredicted RBP11.59□□□□□ -0.55
LINC01940-201ENST00000455228 UVSSAQ2YD98 709 aa11.59□□□□□ -0.55
LINC01940-201ENST00000455228 NFATC2IPQ8NCF5 419 aa11.59□□□□□ -0.55
LINC01940-201ENST00000455228 RASSF4Q9H2L5 321 aa11.59□□□□□ -0.55
LINC01940-201ENST00000455228 ADGRB2O60241 1585 aa11.59□□□□□ -0.55
LINC01940-201ENST00000455228 USP32Q8NFA0 1604 aa11.58□□□□□ -0.55
LINC01940-201ENST00000455228 FCHSD2O94868 740 aa11.58□□□□□ -0.56
LINC01940-201ENST00000455228 MCTP1Q6DN14 999 aa11.58□□□□□ -0.56
LINC01940-201ENST00000455228 ADGRB3O60242 1522 aa11.58□□□□□ -0.56
LINC01940-201ENST00000455228 IFT172Q9UG01 1749 aa11.58□□□□□ -0.56
LINC01940-201ENST00000455228 RSPH14Q9UHP6 348 aa11.58□□□□□ -0.56
LINC01940-201ENST00000455228 PPRC1Q5VV67 1664 aaKnown RBP11.58□□□□□ -0.56
LINC01940-201ENST00000455228 BAG4O95429 457 aaKnown RBP11.58□□□□□ -0.56
LINC01940-201ENST00000455228 CHAF1AQ13111 956 aaPredicted RBP11.58□□□□□ -0.56
LINC01940-201ENST00000455228 KLHL40Q2TBA0 621 aa11.58□□□□□ -0.56
LINC01940-201ENST00000455228 THUMPD2Q9BTF0 503 aaKnown RBP11.58□□□□□ -0.56
LINC01940-201ENST00000455228 FKBP5Q13451 457 aaPredicted RBP11.57□□□□□ -0.56
LINC01940-201ENST00000455228 CXorf56Q9H5V9 222 aa11.57□□□□□ -0.56
LINC01940-201ENST00000455228 CCDC39Q9UFE4 941 aa11.57□□□□□ -0.56
LINC01940-201ENST00000455228 NPATQ14207 1427 aa11.57□□□□□ -0.56
LINC01940-201ENST00000455228 ADGRB1O14514 1584 aa11.57□□□□□ -0.56
LINC01940-201ENST00000455228 CTAGE5O15320 804 aa11.57□□□□□ -0.56
LINC01940-201ENST00000455228 HMOX1P09601 288 aa11.57□□□□□ -0.56
LINC01940-201ENST00000455228 NEFHP12036 1026 aa11.57□□□□□ -0.56
LINC01940-201ENST00000455228 CASQ1P31415 396 aa11.57□□□□□ -0.56
LINC01940-201ENST00000455228 TSPAN18Q96SJ8 248 aa11.57□□□□□ -0.56
LINC01940-201ENST00000455228 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.57□□□□□ -0.56
LINC01940-201ENST00000455228 MROH1Q8NDA8 1641 aa11.57□□□□□ -0.56
LINC01940-201ENST00000455228 PPIP5K1Q6PFW1 1433 aa11.57□□□□□ -0.56
LINC01940-201ENST00000455228 CCDC196A0A1B0GTZ2 297 aa11.56□□□□□ -0.56
LINC01940-201ENST00000455228 ARID4AP29374 1257 aaPredicted RBP11.56□□□□□ -0.56
LINC01940-201ENST00000455228 NUCB2P80303 420 aa11.56□□□□□ -0.56
LINC01940-201ENST00000455228 CAVIN1Q6NZI2 390 aaKnown RBP11.56□□□□□ -0.56
LINC01940-201ENST00000455228 TACO1Q9BSH4 297 aaKnown RBP11.56□□□□□ -0.56
LINC01940-201ENST00000455228 RABEP1Q15276 862 aa11.56□□□□□ -0.56
LINC01940-201ENST00000455228 SUFUQ9UMX1 484 aa11.56□□□□□ -0.56
LINC01940-201ENST00000455228 GNAI1P63096 354 aa11.55□□□□□ -0.56
LINC01940-201ENST00000455228 ARHGAP45Q92619 1136 aa11.55□□□□□ -0.56
LINC01940-201ENST00000455228 TEX13AQ9BXU3 409 aaPredicted RBP11.55□□□□□ -0.56
LINC01940-201ENST00000455228 RPS6KL1Q9Y6S9 549 aa11.55□□□□□ -0.56
LINC01940-201ENST00000455228 TULP4Q9NRJ4 1543 aa11.55□□□□□ -0.56
LINC01940-201ENST00000455228 ATAD2Q6PL18 1390 aa11.55□□□□□ -0.56
LINC01940-201ENST00000455228 VAMP4O75379 141 aa11.55□□□□□ -0.56
LINC01940-201ENST00000455228 ATP2B1P20020 1258 aa11.55□□□□□ -0.56
LINC01940-201ENST00000455228 C1QTNF12Q5T7M4 302 aa11.55□□□□□ -0.56
LINC01940-201ENST00000455228 MRPL50Q8N5N7 158 aaKnown RBP11.55□□□□□ -0.56
LINC01940-201ENST00000455228 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.55□□□□□ -0.56
LINC01940-201ENST00000455228 TMTC2Q8N394 836 aa11.55□□□□□ -0.56
LINC01940-201ENST00000455228 TSPYL6Q8N831 410 aa11.55□□□□□ -0.56
LINC01940-201ENST00000455228 PIBF1Q8WXW3 757 aa11.55□□□□□ -0.56
LINC01940-201ENST00000455228 PRAM1Q96QH2 718 aa11.55□□□□□ -0.56
LINC01940-201ENST00000455228 ZC3H13Q5T200 1668 aaKnown RBP11.54□□□□□ -0.56
LINC01940-201ENST00000455228 APBB1O00213 710 aa11.54□□□□□ -0.56
LINC01940-201ENST00000455228 U2AF2P26368 475 aaKnown RBP eCLIP11.54□□□□□ -0.56
LINC01940-201ENST00000455228 MAP9Q49MG5 647 aa11.54□□□□□ -0.56
LINC01940-201ENST00000455228 TWISTNBQ3B726 338 aaPredicted RBP11.54□□□□□ -0.56
LINC01940-201ENST00000455228 API5Q9BZZ5 524 aaKnown RBP11.54□□□□□ -0.56
LINC01940-201ENST00000455228 ZNF446Q9NWS9 450 aa11.54□□□□□ -0.56
LINC01940-201ENST00000455228 GLI2P10070 1586 aa11.54□□□□□ -0.56
LINC01940-201ENST00000455228 NRDCO43847 1150 aa11.54□□□□□ -0.56
LINC01940-201ENST00000455228 CALRP27797 417 aaKnown RBP11.54□□□□□ -0.56
LINC01940-201ENST00000455228 NFE2L2Q16236 605 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms