RNA–Protein interactions for RNA: ENST00000455113.6

COPS7A-202, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-202ENST00000455113 ATP6V1AP38606 617 aa23.64■■□□□ 1.38
COPS7A-202ENST00000455113 PRKAR2BP31323 418 aa23.64■■□□□ 1.37
COPS7A-202ENST00000455113 MIER1Q8N108 512 aa23.64■■□□□ 1.37
COPS7A-202ENST00000455113 SCN11AQ9UI33 1791 aa23.64■■□□□ 1.37
COPS7A-202ENST00000455113 AK7Q96M32 723 aa23.63■■□□□ 1.37
COPS7A-202ENST00000455113 RBM42Q9BTD8 480 aaKnown RBP23.63■■□□□ 1.37
COPS7A-202ENST00000455113 PRKRIP1Q9H875 184 aaPredicted RBP23.63■■□□□ 1.37
COPS7A-202ENST00000455113 ATF5Q9Y2D1 282 aaPredicted RBP23.63■■□□□ 1.37
COPS7A-202ENST00000455113 QSER1Q2KHR3 1735 aa23.63■■□□□ 1.37
COPS7A-202ENST00000455113 TAF1LQ8IZX4 1826 aa23.62■■□□□ 1.37
COPS7A-202ENST00000455113 MSH5O43196 834 aa23.62■■□□□ 1.37
COPS7A-202ENST00000455113 FCHSD2O94868 740 aa23.62■■□□□ 1.37
COPS7A-202ENST00000455113 SLC16A10Q8TF71 515 aa23.62■■□□□ 1.37
COPS7A-202ENST00000455113 RNMTO43148 476 aaKnown RBP23.62■■□□□ 1.37
COPS7A-202ENST00000455113 RSPH6AQ9H0K4 717 aa23.62■■□□□ 1.37
COPS7A-202ENST00000455113 FLAD1Q8NFF5 587 aa23.61■■□□□ 1.37
COPS7A-202ENST00000455113 SLC52A2Q9HAB3 445 aa23.61■■□□□ 1.37
COPS7A-202ENST00000455113 PNPLA7Q6ZV29 1317 aa23.61■■□□□ 1.37
COPS7A-202ENST00000455113 GNAT3A8MTJ3 354 aa23.6■■□□□ 1.37
COPS7A-202ENST00000455113 LGR6Q9HBX8 967 aa23.6■■□□□ 1.37
COPS7A-202ENST00000455113 VIRMAQ69YN4 1812 aaKnown RBP23.59■■□□□ 1.37
COPS7A-202ENST00000455113 MAP3K5Q99683 1374 aa23.59■■□□□ 1.37
COPS7A-202ENST00000455113 C4BP0C0L5 1744 aa23.58■■□□□ 1.37
COPS7A-202ENST00000455113 PNNQ9H307 717 aaKnown RBP23.58■■□□□ 1.37
COPS7A-202ENST00000455113 TUBGCP6Q96RT7 1819 aa23.57■■□□□ 1.36
COPS7A-202ENST00000455113 MYBBP1AQ9BQG0 1328 aaKnown RBP23.57■■□□□ 1.36
COPS7A-202ENST00000455113 PTCD1O75127 700 aaKnown RBP23.56■■□□□ 1.36
COPS7A-202ENST00000455113 TEFQ10587 303 aa23.56■■□□□ 1.36
COPS7A-202ENST00000455113 POLD1P28340 1107 aa23.56■■□□□ 1.36
COPS7A-202ENST00000455113 PHACTR3Q96KR7 559 aa23.56■■□□□ 1.36
COPS7A-202ENST00000455113 LINC00116Q8NCU8 138 aa23.55■■□□□ 1.36
COPS7A-202ENST00000455113 RTF1Q92541 710 aaKnown RBP23.55■■□□□ 1.36
COPS7A-202ENST00000455113 ITPK1Q13572 414 aa23.54■■□□□ 1.36
COPS7A-202ENST00000455113 PTGER2P43116 358 aa23.53■■□□□ 1.36
COPS7A-202ENST00000455113 COL23A1Q86Y22 540 aaPredicted RBP23.53■■□□□ 1.36
COPS7A-202ENST00000455113 MRC1P22897 1456 aa23.53■■□□□ 1.36
COPS7A-202ENST00000455113 ZNF831Q5JPB2 1677 aa23.53■■□□□ 1.36
COPS7A-202ENST00000455113 PHF14O94880 888 aa23.53■■□□□ 1.36
COPS7A-202ENST00000455113 GNPATO15228 680 aa23.52■■□□□ 1.36
COPS7A-202ENST00000455113 SSFA2P28290 1259 aa23.52■■□□□ 1.36
COPS7A-202ENST00000455113 TTC5Q8N0Z6 440 aa23.52■■□□□ 1.36
COPS7A-202ENST00000455113 ADAMTS7Q9UKP4 1686 aa23.51■■□□□ 1.35
COPS7A-202ENST00000455113 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.5■■□□□ 1.35
COPS7A-202ENST00000455113 MAPK8IP3Q9UPT6 1336 aa23.5■■□□□ 1.35
COPS7A-202ENST00000455113 IL17REQ8NFR9 667 aa23.5■■□□□ 1.35
COPS7A-202ENST00000455113 ARXQ96QS3 562 aa23.5■■□□□ 1.35
COPS7A-202ENST00000455113 RTCBQ9Y3I0 505 aaKnown RBP23.5■■□□□ 1.35
COPS7A-202ENST00000455113 SLC39A6Q13433 755 aa23.49■■□□□ 1.35
COPS7A-202ENST00000455113 SLC4A9Q96Q91 983 aa23.49■■□□□ 1.35
COPS7A-202ENST00000455113 UBR3Q6ZT12 1888 aa23.49■■□□□ 1.35
COPS7A-202ENST00000455113 DCAF8L1A6NGE4 600 aa23.48■■□□□ 1.35
COPS7A-202ENST00000455113 RC3H1Q5TC82 1133 aaKnown RBP23.48■■□□□ 1.35
COPS7A-202ENST00000455113 SGIP1Q9BQI5 828 aa23.48■■□□□ 1.35
COPS7A-202ENST00000455113 CNTNAP4Q9C0A0 1308 aa23.47■■□□□ 1.35
COPS7A-202ENST00000455113 HTATSF1O43719 755 aaKnown RBP23.46■■□□□ 1.35
COPS7A-202ENST00000455113 TRAPPC3LQ5T215 181 aa23.46■■□□□ 1.35
COPS7A-202ENST00000455113 COL5A3P25940 1745 aaPredicted RBP23.45■■□□□ 1.35
COPS7A-202ENST00000455113 WDR43Q15061 677 aaKnown RBP eCLIP23.45■■□□□ 1.34
COPS7A-202ENST00000455113 CEMIPQ8WUJ3 1361 aa23.45■■□□□ 1.34
COPS7A-202ENST00000455113 CCER2I3L3R5 266 aa23.45■■□□□ 1.34
COPS7A-202ENST00000455113 BTBD11A6QL63 1104 aa23.44■■□□□ 1.34
COPS7A-202ENST00000455113 ADRA2BP18089 450 aa23.44■■□□□ 1.34
COPS7A-202ENST00000455113 MSL1Q68DK7 614 aa23.44■■□□□ 1.34
COPS7A-202ENST00000455113 VSIG10Q8N0Z9 540 aa23.44■■□□□ 1.34
COPS7A-202ENST00000455113 FHDC1Q9C0D6 1143 aaPredicted RBP23.44■■□□□ 1.34
COPS7A-202ENST00000455113 CRKLP46109 303 aaKnown RBP23.43■■□□□ 1.34
COPS7A-202ENST00000455113 ZNF790Q6PG37 636 aa23.43■■□□□ 1.34
COPS7A-202ENST00000455113 MCM10Q7L590 875 aa23.43■■□□□ 1.34
COPS7A-202ENST00000455113 KLHL34Q8N239 644 aa23.43■■□□□ 1.34
COPS7A-202ENST00000455113 PLEKHF1Q96S99 279 aa23.43■■□□□ 1.34
COPS7A-202ENST00000455113 RPS6KA4O75676 772 aa23.42■■□□□ 1.34
COPS7A-202ENST00000455113 RFC4P35249 363 aa23.42■■□□□ 1.34
COPS7A-202ENST00000455113 AMIGO3Q86WK7 504 aa23.42■■□□□ 1.34
COPS7A-202ENST00000455113 SMIM5Q71RC9 77 aa23.41■■□□□ 1.34
COPS7A-202ENST00000455113 DNAJC10Q8IXB1 793 aa23.41■■□□□ 1.34
COPS7A-202ENST00000455113 SYT17Q9BSW7 474 aa23.41■■□□□ 1.34
COPS7A-202ENST00000455113 CICQ96RK0 1608 aaPredicted RBP23.41■■□□□ 1.34
COPS7A-202ENST00000455113 COL24A1Q17RW2 1714 aa23.4■■□□□ 1.34
COPS7A-202ENST00000455113 NFE2L2Q16236 605 aa23.4■■□□□ 1.34
COPS7A-202ENST00000455113 CCDC184Q52MB2 194 aa23.4■■□□□ 1.34
COPS7A-202ENST00000455113 TJP1Q07157 1748 aa23.4■■□□□ 1.34
COPS7A-202ENST00000455113 SIPA1L3O60292 1781 aaPredicted RBP23.4■■□□□ 1.34
COPS7A-202ENST00000455113 FMNL2Q96PY5 1086 aa23.39■■□□□ 1.34
COPS7A-202ENST00000455113 TEX13AQ9BXU3 409 aaPredicted RBP23.39■■□□□ 1.34
COPS7A-202ENST00000455113 KCPQ6ZWJ8 1503 aa23.39■■□□□ 1.33
COPS7A-202ENST00000455113 STARD3NLO95772 234 aa23.39■■□□□ 1.33
COPS7A-202ENST00000455113 DCTN1Q14203 1278 aa23.39■■□□□ 1.33
COPS7A-202ENST00000455113 UBR2Q8IWV8 1755 aa23.38■■□□□ 1.33
COPS7A-202ENST00000455113 ARHGEF1Q92888 912 aaKnown RBP23.38■■□□□ 1.33
COPS7A-202ENST00000455113 CCDC87Q9NVE4 849 aa23.38■■□□□ 1.33
COPS7A-202ENST00000455113 DLG5Q8TDM6 1919 aa23.38■■□□□ 1.33
COPS7A-202ENST00000455113 MYH14Q7Z406 1995 aaKnown RBP23.38■■□□□ 1.33
COPS7A-202ENST00000455113 ZNF496Q96IT1 587 aaPredicted RBP23.37■■□□□ 1.33
COPS7A-202ENST00000455113 CYP19A1P11511 503 aaPredicted RBP23.36■■□□□ 1.33
COPS7A-202ENST00000455113 MRS2Q9HD23 443 aa23.36■■□□□ 1.33
COPS7A-202ENST00000455113 HEG1Q9ULI3 1381 aa23.36■■□□□ 1.33
COPS7A-202ENST00000455113 TAF7Q15545 349 aaPredicted RBP23.36■■□□□ 1.33
COPS7A-202ENST00000455113 NLGN1Q8N2Q7 840 aa23.35■■□□□ 1.33
COPS7A-202ENST00000455113 LMOD3Q0VAK6 560 aa23.34■■□□□ 1.33
COPS7A-202ENST00000455113 INTS5Q6P9B9 1019 aaKnown RBP23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms