RNA–Protein interactions for RNA: ENST00000455076.1

TNRC18-208, Transcript of trinucleotide repeat containing 18, humanhuman

TSL 2

Gene TNRC18, Length 577 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18-208ENST00000455076 U2SURPO15042 1029 aaKnown RBP27.4■■□□□ 1.98
TNRC18-208ENST00000455076 ZEB1P37275 1124 aaPredicted RBP27.4■■□□□ 1.98
TNRC18-208ENST00000455076 MTHFSDQ2M296 383 aaKnown RBP27.4■■□□□ 1.98
TNRC18-208ENST00000455076 CABP4P57796 275 aa27.39■■□□□ 1.98
TNRC18-208ENST00000455076 NUDCQ9Y266 331 aa27.38■■□□□ 1.97
TNRC18-208ENST00000455076 COL5A3P25940 1745 aaPredicted RBP27.38■■□□□ 1.97
TNRC18-208ENST00000455076 RSPH6AQ9H0K4 717 aa27.37■■□□□ 1.97
TNRC18-208ENST00000455076 PPP1R1BQ9UD71 204 aaPredicted RBP27.36■■□□□ 1.97
TNRC18-208ENST00000455076 ATF5Q9Y2D1 282 aaPredicted RBP27.36■■□□□ 1.97
TNRC18-208ENST00000455076 ITPK1Q13572 414 aa27.35■■□□□ 1.97
TNRC18-208ENST00000455076 FLAD1Q8NFF5 587 aa27.35■■□□□ 1.97
TNRC18-208ENST00000455076 GAS2L2Q8NHY3 880 aa27.35■■□□□ 1.97
TNRC18-208ENST00000455076 RNMTO43148 476 aaKnown RBP27.34■■□□□ 1.97
TNRC18-208ENST00000455076 NFATC2IPQ8NCF5 419 aa27.34■■□□□ 1.97
TNRC18-208ENST00000455076 LINC00116Q8NCU8 138 aa27.34■■□□□ 1.97
TNRC18-208ENST00000455076 SLC52A2Q9HAB3 445 aa27.34■■□□□ 1.97
TNRC18-208ENST00000455076 ATP6V1AP38606 617 aa27.33■■□□□ 1.97
TNRC18-208ENST00000455076 COL23A1Q86Y22 540 aaPredicted RBP27.33■■□□□ 1.97
TNRC18-208ENST00000455076 SLC4A9Q96Q91 983 aa27.33■■□□□ 1.97
TNRC18-208ENST00000455076 MAP3K5Q99683 1374 aa27.33■■□□□ 1.97
TNRC18-208ENST00000455076 RALBP1Q15311 655 aa27.32■■□□□ 1.96
TNRC18-208ENST00000455076 AK7Q96M32 723 aa27.32■■□□□ 1.96
TNRC18-208ENST00000455076 LGR6Q9HBX8 967 aa27.32■■□□□ 1.96
TNRC18-208ENST00000455076 FCHSD2O94868 740 aa27.3■■□□□ 1.96
TNRC18-208ENST00000455076 SSFA2P28290 1259 aa27.3■■□□□ 1.96
TNRC18-208ENST00000455076 PRKAR2BP31323 418 aa27.3■■□□□ 1.96
TNRC18-208ENST00000455076 DDX10Q13206 875 aaKnown RBP27.3■■□□□ 1.96
TNRC18-208ENST00000455076 TJP1Q07157 1748 aa27.3■■□□□ 1.96
TNRC18-208ENST00000455076 SIPA1L3O60292 1781 aaPredicted RBP27.3■■□□□ 1.96
TNRC18-208ENST00000455076 UBR2Q8IWV8 1755 aa27.28■■□□□ 1.96
TNRC18-208ENST00000455076 CNTNAP4Q9C0A0 1308 aa27.28■■□□□ 1.96
TNRC18-208ENST00000455076 U2AF1L5P0DN76 240 aaPredicted RBP27.28■■□□□ 1.96
TNRC18-208ENST00000455076 U2AF1Q01081 240 aaKnown RBP eCLIP27.28■■□□□ 1.96
TNRC18-208ENST00000455076 AMIGO3Q86WK7 504 aa27.28■■□□□ 1.96
TNRC18-208ENST00000455076 CEMIPQ8WUJ3 1361 aa27.27■■□□□ 1.96
TNRC18-208ENST00000455076 GNAT3A8MTJ3 354 aa27.27■■□□□ 1.96
TNRC18-208ENST00000455076 PHACTR3Q96KR7 559 aa27.27■■□□□ 1.96
TNRC18-208ENST00000455076 KCPQ6ZWJ8 1503 aa27.26■■□□□ 1.96
TNRC18-208ENST00000455076 RC3H1Q5TC82 1133 aaKnown RBP27.26■■□□□ 1.95
TNRC18-208ENST00000455076 ARXQ96QS3 562 aa27.26■■□□□ 1.95
TNRC18-208ENST00000455076 RBM42Q9BTD8 480 aaKnown RBP27.26■■□□□ 1.95
TNRC18-208ENST00000455076 MYH14Q7Z406 1995 aaKnown RBP27.24■■□□□ 1.95
TNRC18-208ENST00000455076 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.24■■□□□ 1.95
TNRC18-208ENST00000455076 POLD1P28340 1107 aa27.24■■□□□ 1.95
TNRC18-208ENST00000455076 IL17REQ8NFR9 667 aa27.23■■□□□ 1.95
TNRC18-208ENST00000455076 GNPATO15228 680 aa27.22■■□□□ 1.95
TNRC18-208ENST00000455076 FHDC1Q9C0D6 1143 aaPredicted RBP27.22■■□□□ 1.95
TNRC18-208ENST00000455076 PTCD1O75127 700 aaKnown RBP27.21■■□□□ 1.95
TNRC18-208ENST00000455076 MYBBP1AQ9BQG0 1328 aaKnown RBP27.2■■□□□ 1.95
TNRC18-208ENST00000455076 ADRA2BP18089 450 aa27.2■■□□□ 1.94
TNRC18-208ENST00000455076 SYT17Q9BSW7 474 aa27.2■■□□□ 1.94
TNRC18-208ENST00000455076 MSH5O43196 834 aa27.19■■□□□ 1.94
TNRC18-208ENST00000455076 VSIG10Q8N0Z9 540 aa27.18■■□□□ 1.94
TNRC18-208ENST00000455076 RTCBQ9Y3I0 505 aaKnown RBP27.18■■□□□ 1.94
TNRC18-208ENST00000455076 C4AP0C0L4 1744 aa27.17■■□□□ 1.94
TNRC18-208ENST00000455076 RPS6KA4O75676 772 aa27.17■■□□□ 1.94
TNRC18-208ENST00000455076 PHF14O94880 888 aa27.17■■□□□ 1.94
TNRC18-208ENST00000455076 HTATSF1O43719 755 aaKnown RBP27.16■■□□□ 1.94
TNRC18-208ENST00000455076 TEFQ10587 303 aa27.16■■□□□ 1.94
TNRC18-208ENST00000455076 SLC39A6Q13433 755 aa27.16■■□□□ 1.94
TNRC18-208ENST00000455076 PLEKHF1Q96S99 279 aa27.16■■□□□ 1.94
TNRC18-208ENST00000455076 UTRNP46939 3433 aa27.14■■□□□ 1.94
TNRC18-208ENST00000455076 CRKLP46109 303 aaKnown RBP27.14■■□□□ 1.94
TNRC18-208ENST00000455076 SMIM5Q71RC9 77 aa27.14■■□□□ 1.94
TNRC18-208ENST00000455076 MSL1Q68DK7 614 aa27.13■■□□□ 1.93
TNRC18-208ENST00000455076 DLG5Q8TDM6 1919 aa27.13■■□□□ 1.93
TNRC18-208ENST00000455076 TRAPPC3LQ5T215 181 aa27.12■■□□□ 1.93
TNRC18-208ENST00000455076 ZNF790Q6PG37 636 aa27.12■■□□□ 1.93
TNRC18-208ENST00000455076 DNAJC10Q8IXB1 793 aa27.11■■□□□ 1.93
TNRC18-208ENST00000455076 PNNQ9H307 717 aaKnown RBP27.11■■□□□ 1.93
TNRC18-208ENST00000455076 PRKRIP1Q9H875 184 aaPredicted RBP27.11■■□□□ 1.93
TNRC18-208ENST00000455076 CYP19A1P11511 503 aaPredicted RBP27.1■■□□□ 1.93
TNRC18-208ENST00000455076 INTS5Q6P9B9 1019 aaKnown RBP27.1■■□□□ 1.93
TNRC18-208ENST00000455076 TTC5Q8N0Z6 440 aa27.1■■□□□ 1.93
TNRC18-208ENST00000455076 RTF1Q92541 710 aaKnown RBP27.1■■□□□ 1.93
TNRC18-208ENST00000455076 ARHGEF1Q92888 912 aaKnown RBP27.1■■□□□ 1.93
TNRC18-208ENST00000455076 NEFMP07197 916 aa27.09■■□□□ 1.93
TNRC18-208ENST00000455076 HEG1Q9ULI3 1381 aa27.09■■□□□ 1.93
TNRC18-208ENST00000455076 CCDC87Q9NVE4 849 aa27.08■■□□□ 1.93
TNRC18-208ENST00000455076 GOLGB1Q14789 3259 aaKnown RBP27.08■■□□□ 1.93
TNRC18-208ENST00000455076 ZNF496Q96IT1 587 aaPredicted RBP27.07■■□□□ 1.92
TNRC18-208ENST00000455076 MCM10Q7L590 875 aa27.06■■□□□ 1.92
TNRC18-208ENST00000455076 SOS1Q07889 1333 aaPredicted RBP27.06■■□□□ 1.92
TNRC18-208ENST00000455076 DCAF8L1A6NGE4 600 aa27.05■■□□□ 1.92
TNRC18-208ENST00000455076 BTBD11A6QL63 1104 aa27.05■■□□□ 1.92
TNRC18-208ENST00000455076 NFE2L2Q16236 605 aa27.05■■□□□ 1.92
TNRC18-208ENST00000455076 CD2APQ9Y5K6 639 aa27.05■■□□□ 1.92
TNRC18-208ENST00000455076 GYS1P13807 737 aa27.04■■□□□ 1.92
TNRC18-208ENST00000455076 RFC4P35249 363 aa27.04■■□□□ 1.92
TNRC18-208ENST00000455076 NLGN1Q8N2Q7 840 aa27.04■■□□□ 1.92
TNRC18-208ENST00000455076 FMNL2Q96PY5 1086 aa27.04■■□□□ 1.92
TNRC18-208ENST00000455076 USP42Q9H9J4 1324 aaKnown RBP27.04■■□□□ 1.92
TNRC18-208ENST00000455076 TEX13AQ9BXU3 409 aaPredicted RBP27.03■■□□□ 1.92
TNRC18-208ENST00000455076 KIF13BQ9NQT8 1826 aa27.03■■□□□ 1.92
TNRC18-208ENST00000455076 MAPK8IP3Q9UPT6 1336 aa27.03■■□□□ 1.92
TNRC18-208ENST00000455076 ZBTB1Q9Y2K1 713 aa27.02■■□□□ 1.92
TNRC18-208ENST00000455076 STARD3NLO95772 234 aa27.01■■□□□ 1.91
TNRC18-208ENST00000455076 DCTN1Q14203 1278 aa27.01■■□□□ 1.91
TNRC18-208ENST00000455076 NLGN2Q8NFZ4 835 aa27.01■■□□□ 1.91
TNRC18-208ENST00000455076 KDM3BQ7LBC6 1761 aa27.01■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms