RNA–Protein interactions for RNA: ENST00000455069.1

HDAC9-217, Transcript of histone deacetylase 9, humanhuman

TSL 4

Gene HDAC9, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-217ENST00000455069 CCNL1Q9UK58 526 aaPredicted RBP15.16■□□□□ 0.02
HDAC9-217ENST00000455069 ASAP1Q9ULH1 1129 aa15.16■□□□□ 0.02
HDAC9-217ENST00000455069 CICQ96RK0 1608 aaPredicted RBP15.16■□□□□ 0.02
HDAC9-217ENST00000455069 TJP1Q07157 1748 aa15.15■□□□□ 0.02
HDAC9-217ENST00000455069 U2AF1L5P0DN76 240 aaPredicted RBP15.15■□□□□ 0.02
HDAC9-217ENST00000455069 U2AF1Q01081 240 aaKnown RBP eCLIP15.15■□□□□ 0.02
HDAC9-217ENST00000455069 PHACTR3Q96KR7 559 aa15.15■□□□□ 0.02
HDAC9-217ENST00000455069 LGR6Q9HBX8 967 aa15.15■□□□□ 0.02
HDAC9-217ENST00000455069 ATG3Q9NT62 314 aa15.15■□□□□ 0.02
HDAC9-217ENST00000455069 STK32BQ9NY57 414 aa15.15■□□□□ 0.02
HDAC9-217ENST00000455069 NUDCQ9Y266 331 aa15.15■□□□□ 0.02
HDAC9-217ENST00000455069 UBR2Q8IWV8 1755 aa15.15■□□□□ 0.02
HDAC9-217ENST00000455069 MYBBP1AQ9BQG0 1328 aaKnown RBP15.15■□□□□ 0.02
HDAC9-217ENST00000455069 PRKRIP1Q9H875 184 aaPredicted RBP15.14■□□□□ 0.01
HDAC9-217ENST00000455069 PPP1R1BQ9UD71 204 aaPredicted RBP15.14■□□□□ 0.01
HDAC9-217ENST00000455069 COL24A1Q17RW2 1714 aa15.14■□□□□ 0.01
HDAC9-217ENST00000455069 MAP3K5Q99683 1374 aa15.13■□□□□ 0.01
HDAC9-217ENST00000455069 RNMTO43148 476 aaKnown RBP15.13■□□□□ 0.01
HDAC9-217ENST00000455069 SMARCC1Q92922 1105 aaPredicted RBP15.13■□□□□ 0.01
HDAC9-217ENST00000455069 LOC102724428A0A0B4J2F2 783 aa15.12■□□□□ 0.01
HDAC9-217ENST00000455069 SIK1P57059 783 aa15.12■□□□□ 0.01
HDAC9-217ENST00000455069 CABP4P57796 275 aa15.12■□□□□ 0.01
HDAC9-217ENST00000455069 SLC4A9Q96Q91 983 aa15.12■□□□□ 0.01
HDAC9-217ENST00000455069 MYH14Q7Z406 1995 aaKnown RBP15.12■□□□□ 0.01
HDAC9-217ENST00000455069 KCPQ6ZWJ8 1503 aa15.12■□□□□ 0.01
HDAC9-217ENST00000455069 FCHSD2O94868 740 aa15.11■□□□□ 0.01
HDAC9-217ENST00000455069 ZBTB7AO95365 584 aa15.11■□□□□ 0.01
HDAC9-217ENST00000455069 PTGER2P43116 358 aa15.11■□□□□ 0.01
HDAC9-217ENST00000455069 NFATC2IPQ8NCF5 419 aa15.11■□□□□ 0.01
HDAC9-217ENST00000455069 GAS2L2Q8NHY3 880 aa15.11■□□□□ 0.01
HDAC9-217ENST00000455069 SLC52A2Q9HAB3 445 aa15.11■□□□□ 0.01
HDAC9-217ENST00000455069 PNPLA7Q6ZV29 1317 aa15.11■□□□□ 0.01
HDAC9-217ENST00000455069 ITPK1Q13572 414 aa15.1■□□□□ 0.01
HDAC9-217ENST00000455069 AMIGO3Q86WK7 504 aa15.1■□□□□ 0.01
HDAC9-217ENST00000455069 CNKSR2Q8WXI2 1034 aa15.1■□□□□ 0.01
HDAC9-217ENST00000455069 CEMIPQ8WUJ3 1361 aa15.1■□□□□ 0.01
HDAC9-217ENST00000455069 LINC00116Q8NCU8 138 aa15.09■□□□□ 0.01
HDAC9-217ENST00000455069 IL17REQ8NFR9 667 aa15.09■□□□□ 0.01
HDAC9-217ENST00000455069 PLEKHF1Q96S99 279 aa15.09■□□□□ 0.01
HDAC9-217ENST00000455069 GNAT3A8MTJ3 354 aa15.08■□□□□ 0
HDAC9-217ENST00000455069 ATF5Q9Y2D1 282 aaPredicted RBP15.08■□□□□ 0
HDAC9-217ENST00000455069 C4AP0C0L4 1744 aa15.08■□□□□ 0
HDAC9-217ENST00000455069 UTRNP46939 3433 aa15.07■□□□□ 0
HDAC9-217ENST00000455069 SGIP1Q9BQI5 828 aa15.07■□□□□ 0
HDAC9-217ENST00000455069 MTFR1LQ9H019 292 aa15.07■□□□□ 0
HDAC9-217ENST00000455069 ATP6V1AP38606 617 aa15.06■□□□□ 0
HDAC9-217ENST00000455069 SLC39A6Q13433 755 aa15.06■□□□□ 0
HDAC9-217ENST00000455069 SMIM5Q71RC9 77 aa15.06■□□□□ 0
HDAC9-217ENST00000455069 RBM42Q9BTD8 480 aaKnown RBP15.06■□□□□ 0
HDAC9-217ENST00000455069 TFCP2L1Q9NZI6 479 aa15.06■□□□□ 0
HDAC9-217ENST00000455069 PTCD1O75127 700 aaKnown RBP15.05■□□□□ -0
HDAC9-217ENST00000455069 KDM3BQ7LBC6 1761 aa15.05■□□□□ -0
HDAC9-217ENST00000455069 YY1P25490 414 aa15.04■□□□□ -0
HDAC9-217ENST00000455069 COL23A1Q86Y22 540 aaPredicted RBP15.04■□□□□ -0
HDAC9-217ENST00000455069 DCAF8L1A6NGE4 600 aa15.03■□□□□ -0
HDAC9-217ENST00000455069 DCTN1Q14203 1278 aa15.03■□□□□ -0
HDAC9-217ENST00000455069 CCDC184Q52MB2 194 aa15.03■□□□□ -0
HDAC9-217ENST00000455069 MCM10Q7L590 875 aa15.03■□□□□ -0
HDAC9-217ENST00000455069 AK7Q96M32 723 aa15.02■□□□□ -0
HDAC9-217ENST00000455069 SYT17Q9BSW7 474 aa15.02■□□□□ -0
HDAC9-217ENST00000455069 FHDC1Q9C0D6 1143 aaPredicted RBP15.02■□□□□ -0
HDAC9-217ENST00000455069 CNTNAP4Q9C0A0 1308 aa15.01□□□□□ -0.01
HDAC9-217ENST00000455069 TEFQ10587 303 aa15.01□□□□□ -0.01
HDAC9-217ENST00000455069 GNPATO15228 680 aa15□□□□□ -0.01
HDAC9-217ENST00000455069 HTATSF1O43719 755 aaKnown RBP15□□□□□ -0.01
HDAC9-217ENST00000455069 PHF14O94880 888 aa15□□□□□ -0.01
HDAC9-217ENST00000455069 NFE2L2Q16236 605 aa15□□□□□ -0.01
HDAC9-217ENST00000455069 SLC16A10Q8TF71 515 aa15□□□□□ -0.01
HDAC9-217ENST00000455069 ADAMTS8Q9UP79 889 aa15□□□□□ -0.01
HDAC9-217ENST00000455069 MAPK8IP3Q9UPT6 1336 aa14.99□□□□□ -0.01
HDAC9-217ENST00000455069 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.99□□□□□ -0.01
HDAC9-217ENST00000455069 KCNQ3O43525 872 aa14.99□□□□□ -0.01
HDAC9-217ENST00000455069 SSFA2P28290 1259 aa14.99□□□□□ -0.01
HDAC9-217ENST00000455069 ZNF790Q6PG37 636 aa14.99□□□□□ -0.01
HDAC9-217ENST00000455069 DNAJC10Q8IXB1 793 aa14.99□□□□□ -0.01
HDAC9-217ENST00000455069 CCDC146Q8IYE0 955 aa14.99□□□□□ -0.01
HDAC9-217ENST00000455069 ARXQ96QS3 562 aa14.99□□□□□ -0.01
HDAC9-217ENST00000455069 LAMB4A4D0S4 1761 aa14.98□□□□□ -0.01
HDAC9-217ENST00000455069 HMGB2P26583 209 aaKnown RBP14.98□□□□□ -0.01
HDAC9-217ENST00000455069 CRKLP46109 303 aaKnown RBP14.98□□□□□ -0.01
HDAC9-217ENST00000455069 WDR43Q15061 677 aaKnown RBP eCLIP14.98□□□□□ -0.01
HDAC9-217ENST00000455069 RC3H1Q5TC82 1133 aaKnown RBP14.98□□□□□ -0.01
HDAC9-217ENST00000455069 RTF1Q92541 710 aaKnown RBP14.98□□□□□ -0.01
HDAC9-217ENST00000455069 ZNF496Q96IT1 587 aaPredicted RBP14.98□□□□□ -0.01
HDAC9-217ENST00000455069 THUMPD2Q9BTF0 503 aaKnown RBP14.98□□□□□ -0.01
HDAC9-217ENST00000455069 NEFMP07197 916 aa14.97□□□□□ -0.01
HDAC9-217ENST00000455069 MSL1Q68DK7 614 aa14.97□□□□□ -0.01
HDAC9-217ENST00000455069 PNNQ9H307 717 aaKnown RBP14.97□□□□□ -0.01
HDAC9-217ENST00000455069 HEG1Q9ULI3 1381 aa14.97□□□□□ -0.01
HDAC9-217ENST00000455069 CHD4Q14839 1912 aa14.96□□□□□ -0.01
HDAC9-217ENST00000455069 BTBD11A6QL63 1104 aa14.96□□□□□ -0.01
HDAC9-217ENST00000455069 RPS6KA4O75676 772 aa14.96□□□□□ -0.01
HDAC9-217ENST00000455069 CYP19A1P11511 503 aaPredicted RBP14.96□□□□□ -0.01
HDAC9-217ENST00000455069 TMPOP42166 694 aaKnown RBP14.96□□□□□ -0.01
HDAC9-217ENST00000455069 NCBP3Q53F19 620 aaKnown RBP14.96□□□□□ -0.01
HDAC9-217ENST00000455069 INTS5Q6P9B9 1019 aaKnown RBP14.96□□□□□ -0.01
HDAC9-217ENST00000455069 TTC5Q8N0Z6 440 aa14.96□□□□□ -0.01
HDAC9-217ENST00000455069 VSIG10Q8N0Z9 540 aa14.96□□□□□ -0.01
HDAC9-217ENST00000455069 FLAD1Q8NFF5 587 aa14.96□□□□□ -0.01
HDAC9-217ENST00000455069 RUNDC1Q96C34 613 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms