RNA–Protein interactions for RNA: ENST00000454968.5

LINC00963-208, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best) BASIC

Gene LINC00963, Length 1,403 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-208ENST00000454968 DDX54Q8TDD1 881 aaKnown RBP21.64■■□□□ 1.06
LINC00963-208ENST00000454968 RGS17Q9UGC6 210 aaPredicted RBP21.64■■□□□ 1.06
LINC00963-208ENST00000454968 TEFQ10587 303 aa21.63■■□□□ 1.05
LINC00963-208ENST00000454968 MARCH10Q8NA82 808 aaPredicted RBP21.63■■□□□ 1.05
LINC00963-208ENST00000454968 BRWD3Q6RI45 1802 aa21.63■■□□□ 1.05
LINC00963-208ENST00000454968 HEG1Q9ULI3 1381 aa21.62■■□□□ 1.05
LINC00963-208ENST00000454968 RBM6P78332 1123 aaKnown RBP21.62■■□□□ 1.05
LINC00963-208ENST00000454968 TSPYL4Q9UJ04 414 aa21.61■■□□□ 1.05
LINC00963-208ENST00000454968 EXOSC9Q06265 439 aaKnown RBP21.6■■□□□ 1.05
LINC00963-208ENST00000454968 SBF2Q86WG5 1849 aa21.6■■□□□ 1.05
LINC00963-208ENST00000454968 SOS1Q07889 1333 aaPredicted RBP21.59■■□□□ 1.05
LINC00963-208ENST00000454968 RNF123Q5XPI4 1314 aa21.59■■□□□ 1.05
LINC00963-208ENST00000454968 NFATC2IPQ8NCF5 419 aa21.59■■□□□ 1.05
LINC00963-208ENST00000454968 LAS1LQ9Y4W2 734 aaKnown RBP21.59■■□□□ 1.05
LINC00963-208ENST00000454968 ZNF428Q96B54 188 aa21.58■■□□□ 1.05
LINC00963-208ENST00000454968 MIS18AQ9NYP9 233 aa21.58■■□□□ 1.05
LINC00963-208ENST00000454968 BTBD11A6QL63 1104 aa21.57■■□□□ 1.04
LINC00963-208ENST00000454968 ILDR1Q86SU0 546 aaPredicted RBP21.57■■□□□ 1.04
LINC00963-208ENST00000454968 SEPT12Q8IYM1 358 aa21.57■■□□□ 1.04
LINC00963-208ENST00000454968 CACNA1FO60840 1977 aa21.57■■□□□ 1.04
LINC00963-208ENST00000454968 CABP4P57796 275 aa21.56■■□□□ 1.04
LINC00963-208ENST00000454968 C8orf58Q8NAV2 365 aa21.56■■□□□ 1.04
LINC00963-208ENST00000454968 RCAN3Q9UKA8 241 aa21.56■■□□□ 1.04
LINC00963-208ENST00000454968 NHSQ6T4R5 1651 aa21.56■■□□□ 1.04
LINC00963-208ENST00000454968 VAMP4O75379 141 aa21.55■■□□□ 1.04
LINC00963-208ENST00000454968 EIF4A1P60842 406 aaKnown RBP21.55■■□□□ 1.04
LINC00963-208ENST00000454968 KCPQ6ZWJ8 1503 aa21.55■■□□□ 1.04
LINC00963-208ENST00000454968 KAT6BQ8WYB5 2073 aa21.55■■□□□ 1.04
LINC00963-208ENST00000454968 ZNF790Q6PG37 636 aa21.55■■□□□ 1.04
LINC00963-208ENST00000454968 TSPYL6Q8N831 410 aa21.55■■□□□ 1.04
LINC00963-208ENST00000454968 CICQ96RK0 1608 aaPredicted RBP21.53■■□□□ 1.04
LINC00963-208ENST00000454968 KCNQ3O43525 872 aa21.53■■□□□ 1.04
LINC00963-208ENST00000454968 HOXB7P09629 217 aa21.53■■□□□ 1.04
LINC00963-208ENST00000454968 EP400Q96L91 3159 aa21.53■■□□□ 1.04
LINC00963-208ENST00000454968 C5P01031 1676 aa21.52■■□□□ 1.04
LINC00963-208ENST00000454968 RARSP54136 660 aaKnown RBP21.52■■□□□ 1.04
LINC00963-208ENST00000454968 BRPF1P55201 1214 aaPredicted RBP21.52■■□□□ 1.04
LINC00963-208ENST00000454968 KRT24Q2M2I5 525 aa21.52■■□□□ 1.04
LINC00963-208ENST00000454968 TWISTNBQ3B726 338 aaPredicted RBP21.52■■□□□ 1.04
LINC00963-208ENST00000454968 POTEAQ6S8J7 498 aa21.52■■□□□ 1.04
LINC00963-208ENST00000454968 PIGBQ92521 554 aa21.52■■□□□ 1.04
LINC00963-208ENST00000454968 TMOD3Q9NYL9 352 aa21.52■■□□□ 1.04
LINC00963-208ENST00000454968 LAMB4A4D0S4 1761 aa21.51■■□□□ 1.03
LINC00963-208ENST00000454968 RXRBP28702 533 aa21.51■■□□□ 1.03
LINC00963-208ENST00000454968 ZNF831Q5JPB2 1677 aa21.51■■□□□ 1.03
LINC00963-208ENST00000454968 RGS12O14924 1447 aa21.5■■□□□ 1.03
LINC00963-208ENST00000454968 ALDH1L2Q3SY69 923 aa21.5■■□□□ 1.03
LINC00963-208ENST00000454968 BTAF1O14981 1849 aa21.48■■□□□ 1.03
LINC00963-208ENST00000454968 GIGYF1O75420 1035 aaPredicted RBP21.48■■□□□ 1.03
LINC00963-208ENST00000454968 PRIM1P49642 420 aaKnown RBP21.48■■□□□ 1.03
LINC00963-208ENST00000454968 SLC39A6Q13433 755 aa21.48■■□□□ 1.03
LINC00963-208ENST00000454968 A0A0G2JS52 829 aa21.47■■□□□ 1.03
LINC00963-208ENST00000454968 MYT1Q01538 1121 aa21.47■■□□□ 1.03
LINC00963-208ENST00000454968 ZNF496Q96IT1 587 aaPredicted RBP21.47■■□□□ 1.03
LINC00963-208ENST00000454968 ATG3Q9NT62 314 aa21.47■■□□□ 1.03
LINC00963-208ENST00000454968 KRT27Q7Z3Y8 459 aa21.46■■□□□ 1.03
LINC00963-208ENST00000454968 SUPT16HQ9Y5B9 1047 aaKnown RBP21.46■■□□□ 1.03
LINC00963-208ENST00000454968 SSH1Q8WYL5 1049 aa21.46■■□□□ 1.03
LINC00963-208ENST00000454968 TTC5Q8N0Z6 440 aa21.45■■□□□ 1.02
LINC00963-208ENST00000454968 FMNL2Q96PY5 1086 aa21.45■■□□□ 1.02
LINC00963-208ENST00000454968 ELL2O00472 640 aaPredicted RBP21.44■■□□□ 1.02
LINC00963-208ENST00000454968 BCAR3O75815 825 aa21.44■■□□□ 1.02
LINC00963-208ENST00000454968 ASAP1Q9ULH1 1129 aa21.44■■□□□ 1.02
LINC00963-208ENST00000454968 LY75O60449 1722 aa21.43■■□□□ 1.02
LINC00963-208ENST00000454968 TJP1Q07157 1748 aa21.43■■□□□ 1.02
LINC00963-208ENST00000454968 KCNQ2O43526 872 aa21.43■■□□□ 1.02
LINC00963-208ENST00000454968 VSIG10Q8N0Z9 540 aa21.43■■□□□ 1.02
LINC00963-208ENST00000454968 CHMP4AQ9BY43 222 aa21.43■■□□□ 1.02
LINC00963-208ENST00000454968 RRP1P56182 461 aaKnown RBP21.42■■□□□ 1.02
LINC00963-208ENST00000454968 FAM196AQ6ZSG2 479 aa21.42■■□□□ 1.02
LINC00963-208ENST00000454968 ACSBG1Q96GR2 724 aa21.42■■□□□ 1.02
LINC00963-208ENST00000454968 SNRPA1P09661 255 aaKnown RBP21.41■■□□□ 1.02
LINC00963-208ENST00000454968 MRPL50Q8N5N7 158 aaKnown RBP21.41■■□□□ 1.02
LINC00963-208ENST00000454968 FAM182BQ5T319 152 aa21.39■■□□□ 1.02
LINC00963-208ENST00000454968 CCDC30Q5VVM6 783 aa21.39■■□□□ 1.02
LINC00963-208ENST00000454968 SYTL4Q96C24 671 aaPredicted RBP21.39■■□□□ 1.02
LINC00963-208ENST00000454968 COL5A3P25940 1745 aaPredicted RBP21.39■■□□□ 1.01
LINC00963-208ENST00000454968 RREB1Q92766 1687 aa21.39■■□□□ 1.01
LINC00963-208ENST00000454968 PRAMEF22A3QJZ6 481 aa21.38■■□□□ 1.01
LINC00963-208ENST00000454968 SLC4A9Q96Q91 983 aa21.38■■□□□ 1.01
LINC00963-208ENST00000454968 SMC4Q9NTJ3 1288 aa21.38■■□□□ 1.01
LINC00963-208ENST00000454968 KIF16BQ96L93 1317 aa21.38■■□□□ 1.01
LINC00963-208ENST00000454968 HDGFL1Q5TGJ6 251 aa21.38■■□□□ 1.01
LINC00963-208ENST00000454968 PTF1AQ7RTS3 328 aa21.38■■□□□ 1.01
LINC00963-208ENST00000454968 SMARCC1Q92922 1105 aaPredicted RBP21.38■■□□□ 1.01
LINC00963-208ENST00000454968 BCL11BQ9C0K0 894 aaPredicted RBP21.38■■□□□ 1.01
LINC00963-208ENST00000454968 ARHGAP45Q92619 1136 aa21.37■■□□□ 1.01
LINC00963-208ENST00000454968 BCL2L13Q9BXK5 485 aa21.37■■□□□ 1.01
LINC00963-208ENST00000454968 PALLDQ8WX93 1383 aa21.36■■□□□ 1.01
LINC00963-208ENST00000454968 ERBB4Q15303 1308 aa21.36■■□□□ 1.01
LINC00963-208ENST00000454968 PDIA6Q15084 440 aa21.35■■□□□ 1.01
LINC00963-208ENST00000454968 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.35■■□□□ 1.01
LINC00963-208ENST00000454968 TEX13AQ9BXU3 409 aaPredicted RBP21.35■■□□□ 1.01
LINC00963-208ENST00000454968 USP16Q9Y5T5 823 aa21.35■■□□□ 1.01
LINC00963-208ENST00000454968 TNS1Q9HBL0 1735 aaKnown RBP21.35■■□□□ 1.01
LINC00963-208ENST00000454968 PTCD1O75127 700 aaKnown RBP21.34■■□□□ 1.01
LINC00963-208ENST00000454968 LRP10Q7Z4F1 713 aa21.34■■□□□ 1.01
LINC00963-208ENST00000454968 RGPD3A6NKT7 1758 aaPredicted RBP21.34■■□□□ 1.01
LINC00963-208ENST00000454968 RGPD4Q7Z3J3 1758 aa21.34■■□□□ 1.01
LINC00963-208ENST00000454968 N4BP2Q86UW6 1770 aaPredicted RBP21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms