RNA–Protein interactions for RNA: ENST00000454592.5

PHTF2-209, Transcript of putative homeodomain transcription factor 2, humanhuman

TSL 1 (best)

Gene PHTF2, Length 1,563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2-209ENST00000454592 RGPD5Q99666 1765 aa9.77□□□□□ -0.85
PHTF2-209ENST00000454592 BRWD3Q6RI45 1802 aa9.77□□□□□ -0.85
PHTF2-209ENST00000454592 EP400Q96L91 3159 aa9.77□□□□□ -0.85
PHTF2-209ENST00000454592 PEAK1Q9H792 1746 aa9.76□□□□□ -0.85
PHTF2-209ENST00000454592 PARP4Q9UKK3 1724 aaKnown RBP9.76□□□□□ -0.85
PHTF2-209ENST00000454592 ANKRD26Q9UPS8 1709 aa9.76□□□□□ -0.85
PHTF2-209ENST00000454592 BCL9O00512 1426 aa9.76□□□□□ -0.85
PHTF2-209ENST00000454592 A0A0G2JS52 829 aa9.76□□□□□ -0.85
PHTF2-209ENST00000454592 POTEFA5A3E0 1075 aa9.76□□□□□ -0.85
PHTF2-209ENST00000454592 PLCG2P16885 1265 aa9.76□□□□□ -0.85
PHTF2-209ENST00000454592 MYT1Q01538 1121 aa9.76□□□□□ -0.85
PHTF2-209ENST00000454592 HSP90AB2PQ58FF8 381 aa9.76□□□□□ -0.85
PHTF2-209ENST00000454592 NLRP2Q9NX02 1062 aa9.76□□□□□ -0.85
PHTF2-209ENST00000454592 NCAPD2Q15021 1401 aa9.76□□□□□ -0.85
PHTF2-209ENST00000454592 C7P10643 843 aa9.75□□□□□ -0.85
PHTF2-209ENST00000454592 MORC1Q86VD1 984 aa9.75□□□□□ -0.85
PHTF2-209ENST00000454592 METRNQ9UJH8 293 aa9.75□□□□□ -0.85
PHTF2-209ENST00000454592 FAM208AQ9UK61 1670 aaKnown RBP9.75□□□□□ -0.85
PHTF2-209ENST00000454592 SEC24BO95487 1268 aa9.75□□□□□ -0.85
PHTF2-209ENST00000454592 IL2RBP14784 551 aa9.75□□□□□ -0.85
PHTF2-209ENST00000454592 PDE3BQ13370 1112 aa9.75□□□□□ -0.85
PHTF2-209ENST00000454592 DDB1Q16531 1140 aa9.75□□□□□ -0.85
PHTF2-209ENST00000454592 NBPF6Q5VWK0 638 aa9.75□□□□□ -0.85
PHTF2-209ENST00000454592 FAM196AQ6ZSG2 479 aa9.75□□□□□ -0.85
PHTF2-209ENST00000454592 NBPF4Q96M43 638 aa9.75□□□□□ -0.85
PHTF2-209ENST00000454592 TNS2Q63HR2 1409 aa9.74□□□□□ -0.85
PHTF2-209ENST00000454592 LTV1Q96GA3 475 aaPredicted RBP9.74□□□□□ -0.85
PHTF2-209ENST00000454592 LRRC37A3O60309 1634 aa9.74□□□□□ -0.85
PHTF2-209ENST00000454592 EXOC5O00471 708 aa9.73□□□□□ -0.85
PHTF2-209ENST00000454592 TNNT2P45379 298 aaPredicted RBP9.73□□□□□ -0.85
PHTF2-209ENST00000454592 WNK3Q9BYP7 1800 aa9.73□□□□□ -0.85
PHTF2-209ENST00000454592 FAM182BQ5T319 152 aa9.72□□□□□ -0.85
PHTF2-209ENST00000454592 MARCH10Q8NA82 808 aaPredicted RBP9.72□□□□□ -0.85
PHTF2-209ENST00000454592 OVOS2A0A0G2JMS6 1433 aa9.72□□□□□ -0.85
PHTF2-209ENST00000454592 PPM1GO15355 546 aaPredicted RBP9.71□□□□□ -0.85
PHTF2-209ENST00000454592 EIF4A2Q14240 407 aaKnown RBP9.71□□□□□ -0.85
PHTF2-209ENST00000454592 CC2D1BQ5T0F9 858 aaKnown RBP9.71□□□□□ -0.85
PHTF2-209ENST00000454592 PLEKHG2Q9H7P9 1386 aa9.71□□□□□ -0.85
PHTF2-209ENST00000454592 MAP2P11137 1827 aaKnown RBP9.71□□□□□ -0.85
PHTF2-209ENST00000454592 EYA1Q99502 592 aa9.71□□□□□ -0.86
PHTF2-209ENST00000454592 MEGF6O75095 1541 aa9.71□□□□□ -0.86
PHTF2-209ENST00000454592 IGSF1Q8N6C5 1336 aa9.7□□□□□ -0.86
PHTF2-209ENST00000454592 IL13P35225 146 aa9.69□□□□□ -0.86
PHTF2-209ENST00000454592 MTHFSP49914 203 aa9.69□□□□□ -0.86
PHTF2-209ENST00000454592 LCE2DQ5TA82 110 aaPredicted RBP9.69□□□□□ -0.86
PHTF2-209ENST00000454592 MICALL2Q8IY33 904 aa9.69□□□□□ -0.86
PHTF2-209ENST00000454592 USHBP1Q8N6Y0 703 aa9.69□□□□□ -0.86
PHTF2-209ENST00000454592 RAPGEF4Q8WZA2 1011 aa9.69□□□□□ -0.86
PHTF2-209ENST00000454592 TRIM37O94972 964 aa9.68□□□□□ -0.86
PHTF2-209ENST00000454592 BAG6P46379 1132 aa9.68□□□□□ -0.86
PHTF2-209ENST00000454592 SF3B2Q13435 895 aaKnown RBP9.68□□□□□ -0.86
PHTF2-209ENST00000454592 ZCRB1Q8TBF4 217 aaKnown RBP9.68□□□□□ -0.86
PHTF2-209ENST00000454592 BOLA1Q9Y3E2 137 aa9.68□□□□□ -0.86
PHTF2-209ENST00000454592 RGPD2P0DJD1 1756 aa9.68□□□□□ -0.86
PHTF2-209ENST00000454592 KDRP35968 1356 aa9.68□□□□□ -0.86
PHTF2-209ENST00000454592 TATP17735 454 aaPredicted RBP9.67□□□□□ -0.86
PHTF2-209ENST00000454592 PARD3Q8TEW0 1356 aa9.67□□□□□ -0.86
PHTF2-209ENST00000454592 DEFB132Q7Z7B7 95 aa9.67□□□□□ -0.86
PHTF2-209ENST00000454592 CAMKK2Q96RR4 588 aa9.67□□□□□ -0.86
PHTF2-209ENST00000454592 SCUBE2Q9NQ36 999 aa9.67□□□□□ -0.86
PHTF2-209ENST00000454592 RGPD1P0DJD0 1748 aa9.66□□□□□ -0.86
PHTF2-209ENST00000454592 PLSCR1O15162 318 aa9.66□□□□□ -0.86
PHTF2-209ENST00000454592 TMEM121BQ9BXQ6 578 aaPredicted RBP9.66□□□□□ -0.86
PHTF2-209ENST00000454592 TNS1Q9HBL0 1735 aaKnown RBP9.66□□□□□ -0.86
PHTF2-209ENST00000454592 COL3A1P02461 1466 aaPredicted RBP9.66□□□□□ -0.86
PHTF2-209ENST00000454592 PCDH11XQ9BZA7 1347 aa9.65□□□□□ -0.86
PHTF2-209ENST00000454592 PCDH11YQ9BZA8 1340 aa9.65□□□□□ -0.86
PHTF2-209ENST00000454592 CYP27B1O15528 508 aa9.65□□□□□ -0.86
PHTF2-209ENST00000454592 PPP2R1AP30153 589 aa9.65□□□□□ -0.86
PHTF2-209ENST00000454592 DDX10Q13206 875 aaKnown RBP9.65□□□□□ -0.86
PHTF2-209ENST00000454592 L3MBTL3Q96JM7 780 aaPredicted RBP9.65□□□□□ -0.86
PHTF2-209ENST00000454592 G3V3G9 751 aa9.64□□□□□ -0.87
PHTF2-209ENST00000454592 DIAPH1O60610 1272 aaKnown RBP9.64□□□□□ -0.87
PHTF2-209ENST00000454592 APBA3O96018 575 aa9.64□□□□□ -0.87
PHTF2-209ENST00000454592 EN1Q05925 392 aaPredicted RBP9.64□□□□□ -0.87
PHTF2-209ENST00000454592 PTF1AQ7RTS3 328 aa9.64□□□□□ -0.87
PHTF2-209ENST00000454592 DDX54Q8TDD1 881 aaKnown RBP9.64□□□□□ -0.87
PHTF2-209ENST00000454592 SPG7Q9UQ90 795 aa9.64□□□□□ -0.87
PHTF2-209ENST00000454592 SHANK3Q9BYB0 1731 aa9.64□□□□□ -0.87
PHTF2-209ENST00000454592 SBF2Q86WG5 1849 aa9.64□□□□□ -0.87
PHTF2-209ENST00000454592 KCNQ2O43526 872 aa9.63□□□□□ -0.87
PHTF2-209ENST00000454592 PKD1L3Q7Z443 1732 aa9.63□□□□□ -0.87
PHTF2-209ENST00000454592 POTEJP0CG39 1038 aa9.63□□□□□ -0.87
PHTF2-209ENST00000454592 RALBP1Q15311 655 aa9.63□□□□□ -0.87
PHTF2-209ENST00000454592 EZH2Q15910 746 aaKnown RBP9.63□□□□□ -0.87
PHTF2-209ENST00000454592 AMOTQ4VCS5 1084 aa9.63□□□□□ -0.87
PHTF2-209ENST00000454592 SULT6B1Q6IMI4 303 aa9.63□□□□□ -0.87
PHTF2-209ENST00000454592 AEBP1Q8IUX7 1158 aa9.63□□□□□ -0.87
PHTF2-209ENST00000454592 CDAN1Q8IWY9 1227 aa9.63□□□□□ -0.87
PHTF2-209ENST00000454592 CRISPLD2Q9H0B8 497 aa9.63□□□□□ -0.87
PHTF2-209ENST00000454592 NHSQ6T4R5 1651 aa9.62□□□□□ -0.87
PHTF2-209ENST00000454592 LARP6Q9BRS8 491 aaKnown RBP9.62□□□□□ -0.87
PHTF2-209ENST00000454592 ZNF316A6NFI3 1004 aaPredicted RBP9.61□□□□□ -0.87
PHTF2-209ENST00000454592 PHKG2P15735 406 aa9.61□□□□□ -0.87
PHTF2-209ENST00000454592 PDE4AP27815 886 aa9.61□□□□□ -0.87
PHTF2-209ENST00000454592 CNGB1Q14028 1251 aaPredicted RBP9.61□□□□□ -0.87
PHTF2-209ENST00000454592 PLEKHO1Q53GL0 409 aaPredicted RBP9.61□□□□□ -0.87
PHTF2-209ENST00000454592 IFNL2Q8IZJ0 200 aa9.61□□□□□ -0.87
PHTF2-209ENST00000454592 ACSBG1Q96GR2 724 aa9.61□□□□□ -0.87
PHTF2-209ENST00000454592 CFAP53Q96M91 514 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms