RNA–Protein interactions for RNA: ENST00000454561.2

TRBV5-4-201, Transcript of T cell receptor beta variable 5-4, humanhuman

APPRIS P1 BASIC

Gene TRBV5-4, Length 544 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4-201ENST00000454561 PAPPAQ13219 1627 aa9.96□□□□□ -0.81
TRBV5-4-201ENST00000454561 CASZ1Q86V15 1759 aa9.96□□□□□ -0.81
TRBV5-4-201ENST00000454561 DLG5Q8TDM6 1919 aa9.96□□□□□ -0.81
TRBV5-4-201ENST00000454561 RNMTO43148 476 aaKnown RBP9.96□□□□□ -0.82
TRBV5-4-201ENST00000454561 ZBTB7AO95365 584 aa9.96□□□□□ -0.82
TRBV5-4-201ENST00000454561 PRKAR2BP31323 418 aa9.96□□□□□ -0.82
TRBV5-4-201ENST00000454561 ATP6V1AP38606 617 aa9.96□□□□□ -0.82
TRBV5-4-201ENST00000454561 GAS2L2Q8NHY3 880 aa9.96□□□□□ -0.82
TRBV5-4-201ENST00000454561 RSPH6AQ9H0K4 717 aa9.96□□□□□ -0.82
TRBV5-4-201ENST00000454561 KDM6AO15550 1401 aaPredicted RBP9.96□□□□□ -0.82
TRBV5-4-201ENST00000454561 ZNF316A6NFI3 1004 aaPredicted RBP9.95□□□□□ -0.82
TRBV5-4-201ENST00000454561 GNAT3A8MTJ3 354 aa9.95□□□□□ -0.82
TRBV5-4-201ENST00000454561 FLAD1Q8NFF5 587 aa9.95□□□□□ -0.82
TRBV5-4-201ENST00000454561 SLC16A10Q8TF71 515 aa9.95□□□□□ -0.82
TRBV5-4-201ENST00000454561 PHACTR3Q96KR7 559 aa9.95□□□□□ -0.82
TRBV5-4-201ENST00000454561 RBM42Q9BTD8 480 aaKnown RBP9.95□□□□□ -0.82
TRBV5-4-201ENST00000454561 MTFR1LQ9H019 292 aa9.95□□□□□ -0.82
TRBV5-4-201ENST00000454561 ATF5Q9Y2D1 282 aaPredicted RBP9.95□□□□□ -0.82
TRBV5-4-201ENST00000454561 UBR3Q6ZT12 1888 aa9.95□□□□□ -0.82
TRBV5-4-201ENST00000454561 NEFMP07197 916 aa9.94□□□□□ -0.82
TRBV5-4-201ENST00000454561 PNNQ9H307 717 aaKnown RBP9.94□□□□□ -0.82
TRBV5-4-201ENST00000454561 SLC52A2Q9HAB3 445 aa9.94□□□□□ -0.82
TRBV5-4-201ENST00000454561 PPP1R1BQ9UD71 204 aaPredicted RBP9.94□□□□□ -0.82
TRBV5-4-201ENST00000454561 PNPLA7Q6ZV29 1317 aa9.93□□□□□ -0.82
TRBV5-4-201ENST00000454561 MYBBP1AQ9BQG0 1328 aaKnown RBP9.93□□□□□ -0.82
TRBV5-4-201ENST00000454561 PTCD1O75127 700 aaKnown RBP9.93□□□□□ -0.82
TRBV5-4-201ENST00000454561 IL17REQ8NFR9 667 aa9.93□□□□□ -0.82
TRBV5-4-201ENST00000454561 AK7Q96M32 723 aa9.93□□□□□ -0.82
TRBV5-4-201ENST00000454561 C4BP0C0L5 1744 aa9.93□□□□□ -0.82
TRBV5-4-201ENST00000454561 ZNF831Q5JPB2 1677 aa9.93□□□□□ -0.82
TRBV5-4-201ENST00000454561 MAP3K5Q99683 1374 aa9.92□□□□□ -0.82
TRBV5-4-201ENST00000454561 TEFQ10587 303 aa9.92□□□□□ -0.82
TRBV5-4-201ENST00000454561 ITPK1Q13572 414 aa9.92□□□□□ -0.82
TRBV5-4-201ENST00000454561 COL23A1Q86Y22 540 aaPredicted RBP9.92□□□□□ -0.82
TRBV5-4-201ENST00000454561 LINC00116Q8NCU8 138 aa9.92□□□□□ -0.82
TRBV5-4-201ENST00000454561 SLC4A9Q96Q91 983 aa9.92□□□□□ -0.82
TRBV5-4-201ENST00000454561 PRKRIP1Q9H875 184 aaPredicted RBP9.92□□□□□ -0.82
TRBV5-4-201ENST00000454561 ADAMTS7Q9UKP4 1686 aa9.92□□□□□ -0.82
TRBV5-4-201ENST00000454561 SIPA1L3O60292 1781 aaPredicted RBP9.91□□□□□ -0.82
TRBV5-4-201ENST00000454561 HTATSF1O43719 755 aaKnown RBP9.91□□□□□ -0.82
TRBV5-4-201ENST00000454561 PTGER2P43116 358 aa9.91□□□□□ -0.82
TRBV5-4-201ENST00000454561 RC3H1Q5TC82 1133 aaKnown RBP9.91□□□□□ -0.82
TRBV5-4-201ENST00000454561 RTF1Q92541 710 aaKnown RBP9.91□□□□□ -0.82
TRBV5-4-201ENST00000454561 SLC39A6Q13433 755 aa9.9□□□□□ -0.82
TRBV5-4-201ENST00000454561 COL5A3P25940 1745 aaPredicted RBP9.9□□□□□ -0.83
TRBV5-4-201ENST00000454561 COL24A1Q17RW2 1714 aa9.9□□□□□ -0.83
TRBV5-4-201ENST00000454561 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.89□□□□□ -0.83
TRBV5-4-201ENST00000454561 GNPATO15228 680 aa9.89□□□□□ -0.83
TRBV5-4-201ENST00000454561 SSFA2P28290 1259 aa9.89□□□□□ -0.83
TRBV5-4-201ENST00000454561 POLD1P28340 1107 aa9.89□□□□□ -0.83
TRBV5-4-201ENST00000454561 TRAPPC3LQ5T215 181 aa9.89□□□□□ -0.83
TRBV5-4-201ENST00000454561 TTC5Q8N0Z6 440 aa9.89□□□□□ -0.83
TRBV5-4-201ENST00000454561 ARXQ96QS3 562 aa9.89□□□□□ -0.83
TRBV5-4-201ENST00000454561 PLEKHF1Q96S99 279 aa9.89□□□□□ -0.83
TRBV5-4-201ENST00000454561 SGIP1Q9BQI5 828 aa9.89□□□□□ -0.83
TRBV5-4-201ENST00000454561 RTCBQ9Y3I0 505 aaKnown RBP9.89□□□□□ -0.83
TRBV5-4-201ENST00000454561 MAPK8IP3Q9UPT6 1336 aa9.88□□□□□ -0.83
TRBV5-4-201ENST00000454561 MRC1P22897 1456 aa9.88□□□□□ -0.83
TRBV5-4-201ENST00000454561 RPS6KA4O75676 772 aa9.88□□□□□ -0.83
TRBV5-4-201ENST00000454561 PHF14O94880 888 aa9.88□□□□□ -0.83
TRBV5-4-201ENST00000454561 UBR2Q8IWV8 1755 aa9.88□□□□□ -0.83
TRBV5-4-201ENST00000454561 CEMIPQ8WUJ3 1361 aa9.88□□□□□ -0.83
TRBV5-4-201ENST00000454561 CNTNAP4Q9C0A0 1308 aa9.87□□□□□ -0.83
TRBV5-4-201ENST00000454561 BTBD11A6QL63 1104 aa9.87□□□□□ -0.83
TRBV5-4-201ENST00000454561 CRKLP46109 303 aaKnown RBP9.87□□□□□ -0.83
TRBV5-4-201ENST00000454561 WDR43Q15061 677 aaKnown RBP eCLIP9.87□□□□□ -0.83
TRBV5-4-201ENST00000454561 TAF7Q15545 349 aaPredicted RBP9.87□□□□□ -0.83
TRBV5-4-201ENST00000454561 NFE2L2Q16236 605 aa9.87□□□□□ -0.83
TRBV5-4-201ENST00000454561 ZNF790Q6PG37 636 aa9.87□□□□□ -0.83
TRBV5-4-201ENST00000454561 SMIM5Q71RC9 77 aa9.87□□□□□ -0.83
TRBV5-4-201ENST00000454561 MCM10Q7L590 875 aa9.87□□□□□ -0.83
TRBV5-4-201ENST00000454561 AMIGO3Q86WK7 504 aa9.87□□□□□ -0.83
TRBV5-4-201ENST00000454561 DNAJC10Q8IXB1 793 aa9.87□□□□□ -0.83
TRBV5-4-201ENST00000454561 VSIG10Q8N0Z9 540 aa9.87□□□□□ -0.83
TRBV5-4-201ENST00000454561 TEX13AQ9BXU3 409 aaPredicted RBP9.87□□□□□ -0.83
TRBV5-4-201ENST00000454561 TJP1Q07157 1748 aa9.87□□□□□ -0.83
TRBV5-4-201ENST00000454561 DCAF8L1A6NGE4 600 aa9.86□□□□□ -0.83
TRBV5-4-201ENST00000454561 CYP19A1P11511 503 aaPredicted RBP9.86□□□□□ -0.83
TRBV5-4-201ENST00000454561 DCTN1Q14203 1278 aa9.86□□□□□ -0.83
TRBV5-4-201ENST00000454561 MSL1Q68DK7 614 aa9.86□□□□□ -0.83
TRBV5-4-201ENST00000454561 ARHGEF1Q92888 912 aaKnown RBP9.86□□□□□ -0.83
TRBV5-4-201ENST00000454561 SYT17Q9BSW7 474 aa9.86□□□□□ -0.83
TRBV5-4-201ENST00000454561 STARD3NLO95772 234 aa9.85□□□□□ -0.83
TRBV5-4-201ENST00000454561 RFC4P35249 363 aa9.85□□□□□ -0.83
TRBV5-4-201ENST00000454561 RIPK4P57078 832 aa9.85□□□□□ -0.83
TRBV5-4-201ENST00000454561 INTS5Q6P9B9 1019 aaKnown RBP9.85□□□□□ -0.83
TRBV5-4-201ENST00000454561 ZNF496Q96IT1 587 aaPredicted RBP9.85□□□□□ -0.83
TRBV5-4-201ENST00000454561 FMNL2Q96PY5 1086 aa9.85□□□□□ -0.83
TRBV5-4-201ENST00000454561 FHDC1Q9C0D6 1143 aaPredicted RBP9.85□□□□□ -0.83
TRBV5-4-201ENST00000454561 CCDC87Q9NVE4 849 aa9.85□□□□□ -0.83
TRBV5-4-201ENST00000454561 ADAMTS8Q9UP79 889 aa9.85□□□□□ -0.83
TRBV5-4-201ENST00000454561 CHD4Q14839 1912 aa9.85□□□□□ -0.83
TRBV5-4-201ENST00000454561 CICQ96RK0 1608 aaPredicted RBP9.85□□□□□ -0.83
TRBV5-4-201ENST00000454561 KCPQ6ZWJ8 1503 aa9.84□□□□□ -0.83
TRBV5-4-201ENST00000454561 ANP32CO43423 234 aa9.84□□□□□ -0.83
TRBV5-4-201ENST00000454561 KCNQ3O43525 872 aa9.84□□□□□ -0.83
TRBV5-4-201ENST00000454561 TMPOP42166 694 aaKnown RBP9.84□□□□□ -0.83
TRBV5-4-201ENST00000454561 NLGN1Q8N2Q7 840 aa9.84□□□□□ -0.83
TRBV5-4-201ENST00000454561 PNISRQ8TF01 805 aaKnown RBP9.84□□□□□ -0.83
TRBV5-4-201ENST00000454561 RUNDC1Q96C34 613 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms