RNA–Protein interactions for RNA: ENST00000454555.2

LINC00343-203, long intergenic non-protein coding RNA 343, humanhuman

TSL 2 BASIC

Gene LINC00343, Length 1,765 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-203ENST00000454555 ZKSCAN2Q63HK3 967 aa16.74■□□□□ 0.27
LINC00343-203ENST00000454555 OVOS2A0A0G2JMS6 1433 aa16.74■□□□□ 0.27
LINC00343-203ENST00000454555 PHACTR3Q96KR7 559 aa16.73■□□□□ 0.27
LINC00343-203ENST00000454555 PLEKHO1Q53GL0 409 aaPredicted RBP16.72■□□□□ 0.27
LINC00343-203ENST00000454555 FAM98CQ17RN3 349 aaKnown RBP16.72■□□□□ 0.27
LINC00343-203ENST00000454555 HDAC1Q13547 482 aaPredicted RBP16.71■□□□□ 0.27
LINC00343-203ENST00000454555 L1TD1Q5T7N2 865 aaKnown RBP16.71■□□□□ 0.27
LINC00343-203ENST00000454555 PDZRN3Q9UPQ7 1066 aa16.71■□□□□ 0.27
LINC00343-203ENST00000454555 SPG7Q9UQ90 795 aa16.71■□□□□ 0.27
LINC00343-203ENST00000454555 PCDHB15Q9Y5E8 787 aa16.71■□□□□ 0.27
LINC00343-203ENST00000454555 PARP4Q9UKK3 1724 aaKnown RBP16.7■□□□□ 0.26
LINC00343-203ENST00000454555 EXOC5O00471 708 aa16.7■□□□□ 0.26
LINC00343-203ENST00000454555 MTHFSDQ2M296 383 aaKnown RBP16.7■□□□□ 0.26
LINC00343-203ENST00000454555 POTEAQ6S8J7 498 aa16.7■□□□□ 0.26
LINC00343-203ENST00000454555 DZIP1LQ8IYY4 767 aaKnown RBP16.7■□□□□ 0.26
LINC00343-203ENST00000454555 GAS2L2Q8NHY3 880 aa16.7■□□□□ 0.26
LINC00343-203ENST00000454555 ZCRB1Q8TBF4 217 aaKnown RBP16.7■□□□□ 0.26
LINC00343-203ENST00000454555 RXRBP28702 533 aa16.69■□□□□ 0.26
LINC00343-203ENST00000454555 DDX19BQ9UMR2 479 aa16.69■□□□□ 0.26
LINC00343-203ENST00000454555 WNK3Q9BYP7 1800 aa16.69■□□□□ 0.26
LINC00343-203ENST00000454555 FTSJ3Q8IY81 847 aaKnown RBP16.69■□□□□ 0.26
LINC00343-203ENST00000454555 ANTXR1Q9H6X2 564 aa16.69■□□□□ 0.26
LINC00343-203ENST00000454555 RLBP1P12271 317 aa16.68■□□□□ 0.26
LINC00343-203ENST00000454555 NEUROD2Q15784 382 aa16.68■□□□□ 0.26
LINC00343-203ENST00000454555 NFE2L2Q16236 605 aa16.68■□□□□ 0.26
LINC00343-203ENST00000454555 DDB1Q16531 1140 aa16.68■□□□□ 0.26
LINC00343-203ENST00000454555 THSD7AQ9UPZ6 1657 aa16.68■□□□□ 0.26
LINC00343-203ENST00000454555 TMPOP42166 694 aaKnown RBP16.67■□□□□ 0.26
LINC00343-203ENST00000454555 FAM43AQ8N2R8 423 aa16.67■□□□□ 0.26
LINC00343-203ENST00000454555 ZNF428Q96B54 188 aa16.67■□□□□ 0.26
LINC00343-203ENST00000454555 PKD1L3Q7Z443 1732 aa16.67■□□□□ 0.26
LINC00343-203ENST00000454555 TNS2Q63HR2 1409 aa16.67■□□□□ 0.26
LINC00343-203ENST00000454555 KIF16BQ96L93 1317 aa16.66■□□□□ 0.26
LINC00343-203ENST00000454555 PCDH11XQ9BZA7 1347 aa16.66■□□□□ 0.26
LINC00343-203ENST00000454555 PCDH11YQ9BZA8 1340 aa16.66■□□□□ 0.26
LINC00343-203ENST00000454555 SEC24BO95487 1268 aa16.66■□□□□ 0.26
LINC00343-203ENST00000454555 SEPT12Q8IYM1 358 aa16.66■□□□□ 0.26
LINC00343-203ENST00000454555 BRPF3Q9ULD4 1205 aa16.66■□□□□ 0.26
LINC00343-203ENST00000454555 RRP7AQ9Y3A4 280 aaKnown RBP16.66■□□□□ 0.26
LINC00343-203ENST00000454555 ZNF530Q6P9A1 599 aaPredicted RBP16.66■□□□□ 0.26
LINC00343-203ENST00000454555 IFNL2Q8IZJ0 200 aa16.66■□□□□ 0.26
LINC00343-203ENST00000454555 CHMP4BQ9H444 224 aaKnown RBP16.66■□□□□ 0.26
LINC00343-203ENST00000454555 CYP27B1O15528 508 aa16.65■□□□□ 0.26
LINC00343-203ENST00000454555 AKAP4Q5JQC9 854 aa16.65■□□□□ 0.26
LINC00343-203ENST00000454555 IPO8O15397 1037 aaKnown RBP16.64■□□□□ 0.25
LINC00343-203ENST00000454555 PHKG2P15735 406 aa16.64■□□□□ 0.25
LINC00343-203ENST00000454555 RIPK4P57078 832 aa16.64■□□□□ 0.25
LINC00343-203ENST00000454555 LRRC37A3O60309 1634 aa16.64■□□□□ 0.25
LINC00343-203ENST00000454555 A0A0G2JS52 829 aa16.64■□□□□ 0.25
LINC00343-203ENST00000454555 HTATSF1O43719 755 aaKnown RBP16.64■□□□□ 0.25
LINC00343-203ENST00000454555 C1orf141Q5JVX7 400 aa16.64■□□□□ 0.25
LINC00343-203ENST00000454555 GNAT3A8MTJ3 354 aa16.63■□□□□ 0.25
LINC00343-203ENST00000454555 NKX1-1Q15270 411 aaPredicted RBP16.63■□□□□ 0.25
LINC00343-203ENST00000454555 TBC1D2Q9BYX2 928 aa16.63■□□□□ 0.25
LINC00343-203ENST00000454555 HSP90AB1P08238 724 aaKnown RBP16.62■□□□□ 0.25
LINC00343-203ENST00000454555 BRPF1P55201 1214 aaPredicted RBP16.62■□□□□ 0.25
LINC00343-203ENST00000454555 ALDH1L2Q3SY69 923 aa16.62■□□□□ 0.25
LINC00343-203ENST00000454555 ATF7IPQ6VMQ6 1270 aa16.62■□□□□ 0.25
LINC00343-203ENST00000454555 SMC5Q8IY18 1101 aa16.62■□□□□ 0.25
LINC00343-203ENST00000454555 DDX54Q8TDD1 881 aaKnown RBP16.62■□□□□ 0.25
LINC00343-203ENST00000454555 SMC4Q9NTJ3 1288 aa16.62■□□□□ 0.25
LINC00343-203ENST00000454555 MAP3K5Q99683 1374 aa16.62■□□□□ 0.25
LINC00343-203ENST00000454555 LMOD3Q0VAK6 560 aa16.61■□□□□ 0.25
LINC00343-203ENST00000454555 MARCH10Q8NA82 808 aaPredicted RBP16.61■□□□□ 0.25
LINC00343-203ENST00000454555 SHANK3Q9BYB0 1731 aa16.61■□□□□ 0.25
LINC00343-203ENST00000454555 EIF5BO60841 1220 aaKnown RBP16.61■□□□□ 0.25
LINC00343-203ENST00000454555 TRIM35Q9UPQ4 493 aa16.61■□□□□ 0.25
LINC00343-203ENST00000454555 DCAF5Q96JK2 942 aa16.6■□□□□ 0.25
LINC00343-203ENST00000454555 C22orf23Q9BZE7 217 aa16.6■□□□□ 0.25
LINC00343-203ENST00000454555 CHMP5Q9NZZ3 219 aa16.6■□□□□ 0.25
LINC00343-203ENST00000454555 RGS12O14924 1447 aa16.59■□□□□ 0.25
LINC00343-203ENST00000454555 RTF1Q92541 710 aaKnown RBP16.59■□□□□ 0.25
LINC00343-203ENST00000454555 BCL2L13Q9BXK5 485 aa16.59■□□□□ 0.25
LINC00343-203ENST00000454555 ISY1Q9ULR0 285 aaKnown RBP16.59■□□□□ 0.25
LINC00343-203ENST00000454555 TRIM27P14373 513 aa16.59■□□□□ 0.25
LINC00343-203ENST00000454555 KRT27Q7Z3Y8 459 aa16.59■□□□□ 0.25
LINC00343-203ENST00000454555 IL17REQ8NFR9 667 aa16.59■□□□□ 0.25
LINC00343-203ENST00000454555 SLKQ9H2G2 1235 aaPredicted RBP16.59■□□□□ 0.25
LINC00343-203ENST00000454555 RTN4Q9NQC3 1192 aaKnown RBP16.59■□□□□ 0.25
LINC00343-203ENST00000454555 MPRIPQ6WCQ1 1025 aa16.58■□□□□ 0.24
LINC00343-203ENST00000454555 BCL9O00512 1426 aa16.58■□□□□ 0.24
LINC00343-203ENST00000454555 CEMIPQ8WUJ3 1361 aa16.57■□□□□ 0.24
LINC00343-203ENST00000454555 RNMTO43148 476 aaKnown RBP16.57■□□□□ 0.24
LINC00343-203ENST00000454555 CALD1Q05682 793 aaKnown RBP16.57■□□□□ 0.24
LINC00343-203ENST00000454555 EXOSC9Q06265 439 aaKnown RBP16.57■□□□□ 0.24
LINC00343-203ENST00000454555 TNNQ9UQP3 1299 aa16.57■□□□□ 0.24
LINC00343-203ENST00000454555 LGR6Q9HBX8 967 aa16.56■□□□□ 0.24
LINC00343-203ENST00000454555 KDM6AO15550 1401 aaPredicted RBP16.56■□□□□ 0.24
LINC00343-203ENST00000454555 ADAMTS7Q9UKP4 1686 aa16.56■□□□□ 0.24
LINC00343-203ENST00000454555 PTMSP20962 102 aa16.56■□□□□ 0.24
LINC00343-203ENST00000454555 DCTN1Q14203 1278 aa16.56■□□□□ 0.24
LINC00343-203ENST00000454555 MCM10Q7L590 875 aa16.56■□□□□ 0.24
LINC00343-203ENST00000454555 SSH1Q8WYL5 1049 aa16.56■□□□□ 0.24
LINC00343-203ENST00000454555 ZBTB40Q9NUA8 1239 aa16.56■□□□□ 0.24
LINC00343-203ENST00000454555 DLG5Q8TDM6 1919 aa16.56■□□□□ 0.24
LINC00343-203ENST00000454555 ERVV-2B6SEH9 535 aa16.55■□□□□ 0.24
LINC00343-203ENST00000454555 MCM4P33991 863 aa16.55■□□□□ 0.24
LINC00343-203ENST00000454555 RBM25P49756 843 aaKnown RBP16.55■□□□□ 0.24
LINC00343-203ENST00000454555 ITPRIPQ8IWB1 547 aa16.55■□□□□ 0.24
LINC00343-203ENST00000454555 HSCBQ8IWL3 235 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms