RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 PLEKHO1Q53GL0 409 aaPredicted RBP14.68□□□□□ -0.06
SMPD4-213ENST00000454468 MCTP1Q6DN14 999 aa14.68□□□□□ -0.06
SMPD4-213ENST00000454468 K7ELQ4 463 aaPredicted RBP14.68□□□□□ -0.06
SMPD4-213ENST00000454468 ATF3P18847 181 aa14.68□□□□□ -0.06
SMPD4-213ENST00000454468 DDX49Q9Y6V7 483 aaKnown RBP14.68□□□□□ -0.06
SMPD4-213ENST00000454468 REC8O95072 547 aa14.67□□□□□ -0.06
SMPD4-213ENST00000454468 SSFA2P28290 1259 aa14.67□□□□□ -0.06
SMPD4-213ENST00000454468 MAP2P11137 1827 aaKnown RBP14.67□□□□□ -0.06
SMPD4-213ENST00000454468 PTPRCP08575 1304 aa14.67□□□□□ -0.06
SMPD4-213ENST00000454468 SIRT1Q96EB6 747 aa14.67□□□□□ -0.06
SMPD4-213ENST00000454468 MCCP23508 829 aa14.66□□□□□ -0.06
SMPD4-213ENST00000454468 TNPO1Q92973 898 aaKnown RBP14.66□□□□□ -0.06
SMPD4-213ENST00000454468 PLEKHG1Q9ULL1 1385 aa14.66□□□□□ -0.06
SMPD4-213ENST00000454468 KIAA1211Q6ZU35 1233 aa14.66□□□□□ -0.06
SMPD4-213ENST00000454468 GCP02774 474 aa14.65□□□□□ -0.06
SMPD4-213ENST00000454468 PPP1R42Q7Z4L9 355 aa14.65□□□□□ -0.06
SMPD4-213ENST00000454468 RIC3Q7Z5B4 369 aa14.65□□□□□ -0.06
SMPD4-213ENST00000454468 SBNO1A3KN83 1393 aa14.65□□□□□ -0.06
SMPD4-213ENST00000454468 KRT28Q7Z3Y7 464 aa14.65□□□□□ -0.06
SMPD4-213ENST00000454468 ANKRD24Q8TF21 1146 aa14.65□□□□□ -0.06
SMPD4-213ENST00000454468 ADAMTS13Q76LX8 1427 aa14.65□□□□□ -0.06
SMPD4-213ENST00000454468 PIK3R4Q99570 1358 aa14.65□□□□□ -0.06
SMPD4-213ENST00000454468 MX1P20591 662 aa14.64□□□□□ -0.07
SMPD4-213ENST00000454468 CDK12Q9NYV4 1490 aaPredicted RBP14.64□□□□□ -0.07
SMPD4-213ENST00000454468 PTPRUQ92729 1446 aa14.64□□□□□ -0.07
SMPD4-213ENST00000454468 ERC2O15083 957 aa14.64□□□□□ -0.07
SMPD4-213ENST00000454468 HSPA2P54652 639 aa14.64□□□□□ -0.07
SMPD4-213ENST00000454468 PDE1AP54750 535 aa14.64□□□□□ -0.07
SMPD4-213ENST00000454468 ANP32BQ92688 251 aaKnown RBP14.64□□□□□ -0.07
SMPD4-213ENST00000454468 PRAMEF22A3QJZ6 481 aa14.63□□□□□ -0.07
SMPD4-213ENST00000454468 L1TD1Q5T7N2 865 aaKnown RBP14.63□□□□□ -0.07
SMPD4-213ENST00000454468 TRIM44Q96DX7 344 aaPredicted RBP14.63□□□□□ -0.07
SMPD4-213ENST00000454468 CWF19L2Q2TBE0 894 aaKnown RBP14.63□□□□□ -0.07
SMPD4-213ENST00000454468 NBPF7P0C2Y1 421 aaPredicted RBP14.63□□□□□ -0.07
SMPD4-213ENST00000454468 CHAMP1Q96JM3 812 aa14.63□□□□□ -0.07
SMPD4-213ENST00000454468 RTL1A6NKG5 1358 aa14.62□□□□□ -0.07
SMPD4-213ENST00000454468 DDX11L8A8MPP1 907 aa14.62□□□□□ -0.07
SMPD4-213ENST00000454468 CWC27Q6UX04 472 aaKnown RBP14.62□□□□□ -0.07
SMPD4-213ENST00000454468 PA2G4Q9UQ80 394 aaKnown RBP14.62□□□□□ -0.07
SMPD4-213ENST00000454468 MED14O60244 1454 aa14.62□□□□□ -0.07
SMPD4-213ENST00000454468 IFIT2P09913 472 aaKnown RBP14.62□□□□□ -0.07
SMPD4-213ENST00000454468 TTC5Q8N0Z6 440 aa14.62□□□□□ -0.07
SMPD4-213ENST00000454468 PANK2Q9BZ23 570 aa14.62□□□□□ -0.07
SMPD4-213ENST00000454468 NAP1L2Q9ULW6 460 aaPredicted RBP14.62□□□□□ -0.07
SMPD4-213ENST00000454468 DNAAF4Q8WXU2 420 aa14.61□□□□□ -0.07
SMPD4-213ENST00000454468 STRN4Q9NRL3 753 aa14.61□□□□□ -0.07
SMPD4-213ENST00000454468 A0A0U1RQG5 324 aaPredicted RBP14.61□□□□□ -0.07
SMPD4-213ENST00000454468 RABEP1Q15276 862 aa14.61□□□□□ -0.07
SMPD4-213ENST00000454468 KCNH5Q8NCM2 988 aa14.61□□□□□ -0.07
SMPD4-213ENST00000454468 MAP3K2Q9Y2U5 619 aa14.61□□□□□ -0.07
SMPD4-213ENST00000454468 ZGPATQ8N5A5 531 aaKnown RBP14.6□□□□□ -0.07
SMPD4-213ENST00000454468 IP6K1Q92551 441 aa14.6□□□□□ -0.07
SMPD4-213ENST00000454468 ANTXR1Q9H6X2 564 aa14.6□□□□□ -0.07
SMPD4-213ENST00000454468 MAP3K5Q99683 1374 aa14.6□□□□□ -0.07
SMPD4-213ENST00000454468 DIAPH3Q9NSV4 1193 aa14.6□□□□□ -0.07
SMPD4-213ENST00000454468 PLCB2Q00722 1185 aa14.6□□□□□ -0.07
SMPD4-213ENST00000454468 SPG7Q9UQ90 795 aa14.6□□□□□ -0.07
SMPD4-213ENST00000454468 IGSF1Q8N6C5 1336 aa14.6□□□□□ -0.07
SMPD4-213ENST00000454468 PRPF40AO75400 957 aaKnown RBP14.59□□□□□ -0.07
SMPD4-213ENST00000454468 PTCD1O75127 700 aaKnown RBP14.59□□□□□ -0.07
SMPD4-213ENST00000454468 RBM25P49756 843 aaKnown RBP14.59□□□□□ -0.07
SMPD4-213ENST00000454468 CCDC8Q9H0W5 538 aaPredicted RBP14.59□□□□□ -0.07
SMPD4-213ENST00000454468 BRPF1P55201 1214 aaPredicted RBP14.58□□□□□ -0.07
SMPD4-213ENST00000454468 CAVIN1Q6NZI2 390 aaKnown RBP14.58□□□□□ -0.07
SMPD4-213ENST00000454468 USP44Q9H0E7 712 aa14.58□□□□□ -0.07
SMPD4-213ENST00000454468 SPATA31D1Q6ZQQ2 1576 aa14.58□□□□□ -0.08
SMPD4-213ENST00000454468 CLASRPQ8N2M8 674 aaKnown RBP14.58□□□□□ -0.08
SMPD4-213ENST00000454468 ATP8B2P98198 1209 aa14.58□□□□□ -0.08
SMPD4-213ENST00000454468 G3BP1Q13283 466 aaKnown RBP eCLIP14.58□□□□□ -0.084e-7■□□□□ 10.4
SMPD4-213ENST00000454468 NFATC2IPQ8NCF5 419 aa14.58□□□□□ -0.08
SMPD4-213ENST00000454468 KLHDC4Q8TBB5 520 aa14.58□□□□□ -0.08
SMPD4-213ENST00000454468 USP26Q9BXU7 913 aa14.58□□□□□ -0.08
SMPD4-213ENST00000454468 AGLP35573 1532 aa14.57□□□□□ -0.08
SMPD4-213ENST00000454468 NEXNQ0ZGT2 675 aa14.57□□□□□ -0.08
SMPD4-213ENST00000454468 PROSER3Q2NL68 480 aa14.57□□□□□ -0.08
SMPD4-213ENST00000454468 CCDC85AQ96PX6 553 aaPredicted RBP14.57□□□□□ -0.08
SMPD4-213ENST00000454468 ATP5J2-PTCD1G3V325 749 aa14.57□□□□□ -0.08
SMPD4-213ENST00000454468 PKP1Q13835 747 aa14.57□□□□□ -0.08
SMPD4-213ENST00000454468 KAT6BQ8WYB5 2073 aa14.57□□□□□ -0.08
SMPD4-213ENST00000454468 AACSQ86V21 672 aa14.57□□□□□ -0.08
SMPD4-213ENST00000454468 UNC5CLQ8IV45 518 aa14.57□□□□□ -0.08
SMPD4-213ENST00000454468 TATP17735 454 aaPredicted RBP14.56□□□□□ -0.08
SMPD4-213ENST00000454468 FGD1P98174 961 aa14.56□□□□□ -0.08
SMPD4-213ENST00000454468 PTCH1Q13635 1447 aa14.56□□□□□ -0.08
SMPD4-213ENST00000454468 RHPN1Q8TCX5 695 aa14.56□□□□□ -0.08
SMPD4-213ENST00000454468 ARHGEF10O15013 1369 aa14.56□□□□□ -0.08
SMPD4-213ENST00000454468 AXIN2Q9Y2T1 843 aa14.55□□□□□ -0.08
SMPD4-213ENST00000454468 DBF4Q9UBU7 674 aaPredicted RBP14.55□□□□□ -0.08
SMPD4-213ENST00000454468 ADGRB2O60241 1585 aa14.55□□□□□ -0.08
SMPD4-213ENST00000454468 DDX58O95786 925 aaKnown RBP14.55□□□□□ -0.08
SMPD4-213ENST00000454468 SYTL4Q96C24 671 aaPredicted RBP14.55□□□□□ -0.08
SMPD4-213ENST00000454468 GDPD2Q9HCC8 539 aa14.55□□□□□ -0.08
SMPD4-213ENST00000454468 CDC42BPGQ6DT37 1551 aa14.55□□□□□ -0.08
SMPD4-213ENST00000454468 DLC1Q96QB1 1528 aa14.55□□□□□ -0.08
SMPD4-213ENST00000454468 KIAA0232Q92628 1395 aa14.54□□□□□ -0.08
SMPD4-213ENST00000454468 CPA1P15085 419 aa14.54□□□□□ -0.08
SMPD4-213ENST00000454468 EVA1CP58658 441 aa14.54□□□□□ -0.08
SMPD4-213ENST00000454468 EIF4A1P60842 406 aaKnown RBP14.54□□□□□ -0.08
SMPD4-213ENST00000454468 MYD88Q99836 296 aa14.54□□□□□ -0.08
SMPD4-213ENST00000454468 USP32Q8NFA0 1604 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms