RNA–Protein interactions for RNA: ENST00000454225.1

CITED1-210, Transcript of Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 1, humanhuman

TSL 5

Gene CITED1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CITED1-210ENST00000454225 SCN11AQ9UI33 1791 aa34.71■■■■□ 3.15
CITED1-210ENST00000454225 ATP6V1AP38606 617 aa34.7■■■■□ 3.15
CITED1-210ENST00000454225 LINC00116Q8NCU8 138 aa34.7■■■■□ 3.15
CITED1-210ENST00000454225 ITPK1Q13572 414 aa34.69■■■■□ 3.14
CITED1-210ENST00000454225 NFATC2IPQ8NCF5 419 aa34.69■■■■□ 3.14
CITED1-210ENST00000454225 RBM42Q9BTD8 480 aaKnown RBP34.68■■■■□ 3.14
CITED1-210ENST00000454225 LGR6Q9HBX8 967 aa34.66■■■■□ 3.14
CITED1-210ENST00000454225 NUDCQ9Y266 331 aa34.66■■■■□ 3.14
CITED1-210ENST00000454225 ARXQ96QS3 562 aa34.65■■■■□ 3.14
CITED1-210ENST00000454225 VIRMAQ69YN4 1812 aaKnown RBP34.63■■■■□ 3.13
CITED1-210ENST00000454225 RNMTO43148 476 aaKnown RBP34.63■■■■□ 3.13
CITED1-210ENST00000454225 AMIGO3Q86WK7 504 aa34.63■■■■□ 3.13
CITED1-210ENST00000454225 FLAD1Q8NFF5 587 aa34.63■■■■□ 3.13
CITED1-210ENST00000454225 SLC4A9Q96Q91 983 aa34.63■■■■□ 3.13
CITED1-210ENST00000454225 UBR3Q6ZT12 1888 aa34.63■■■■□ 3.13
CITED1-210ENST00000454225 PHF14O94880 888 aa34.62■■■■□ 3.13
CITED1-210ENST00000454225 POLD1P28340 1107 aa34.62■■■■□ 3.13
CITED1-210ENST00000454225 FHDC1Q9C0D6 1143 aaPredicted RBP34.62■■■■□ 3.13
CITED1-210ENST00000454225 COL24A1Q17RW2 1714 aa34.61■■■■□ 3.13
CITED1-210ENST00000454225 DDX10Q13206 875 aaKnown RBP34.61■■■■□ 3.13
CITED1-210ENST00000454225 SMIM5Q71RC9 77 aa34.61■■■■□ 3.13
CITED1-210ENST00000454225 SLC52A2Q9HAB3 445 aa34.61■■■■□ 3.13
CITED1-210ENST00000454225 U2AF1L5P0DN76 240 aaPredicted RBP34.6■■■■□ 3.13
CITED1-210ENST00000454225 PRKAR2BP31323 418 aa34.6■■■■□ 3.13
CITED1-210ENST00000454225 U2AF1Q01081 240 aaKnown RBP eCLIP34.6■■■■□ 3.13
CITED1-210ENST00000454225 RSPH6AQ9H0K4 717 aa34.6■■■■□ 3.13
CITED1-210ENST00000454225 MRC1P22897 1456 aa34.59■■■■□ 3.13
CITED1-210ENST00000454225 PTCD1O75127 700 aaKnown RBP34.59■■■■□ 3.13
CITED1-210ENST00000454225 MSL1Q68DK7 614 aa34.59■■■■□ 3.13
CITED1-210ENST00000454225 GAS2L2Q8NHY3 880 aa34.59■■■■□ 3.13
CITED1-210ENST00000454225 ZNF831Q5JPB2 1677 aa34.58■■■■□ 3.13
CITED1-210ENST00000454225 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP34.58■■■■□ 3.13
CITED1-210ENST00000454225 GNPATO15228 680 aa34.58■■■■□ 3.13
CITED1-210ENST00000454225 ADAMTS7Q9UKP4 1686 aa34.57■■■■□ 3.13
CITED1-210ENST00000454225 SYT17Q9BSW7 474 aa34.56■■■■□ 3.12
CITED1-210ENST00000454225 MAP3K5Q99683 1374 aa34.56■■■■□ 3.12
CITED1-210ENST00000454225 SSFA2P28290 1259 aa34.55■■■■□ 3.12
CITED1-210ENST00000454225 PHACTR3Q96KR7 559 aa34.55■■■■□ 3.12
CITED1-210ENST00000454225 COL5A3P25940 1745 aaPredicted RBP34.54■■■■□ 3.12
CITED1-210ENST00000454225 GNAT3A8MTJ3 354 aa34.52■■■■□ 3.12
CITED1-210ENST00000454225 KLHL34Q8N239 644 aa34.52■■■■□ 3.12
CITED1-210ENST00000454225 SLC39A6Q13433 755 aa34.51■■■■□ 3.12
CITED1-210ENST00000454225 CNTNAP4Q9C0A0 1308 aa34.5■■■■□ 3.11
CITED1-210ENST00000454225 FCHSD2O94868 740 aa34.49■■■■□ 3.11
CITED1-210ENST00000454225 DCAF8L1A6NGE4 600 aa34.48■■■■□ 3.11
CITED1-210ENST00000454225 ZEB1P37275 1124 aaPredicted RBP34.48■■■■□ 3.11
CITED1-210ENST00000454225 RC3H1Q5TC82 1133 aaKnown RBP34.48■■■■□ 3.11
CITED1-210ENST00000454225 IL17REQ8NFR9 667 aa34.48■■■■□ 3.11
CITED1-210ENST00000454225 RTCBQ9Y3I0 505 aaKnown RBP34.48■■■■□ 3.11
CITED1-210ENST00000454225 TJP1Q07157 1748 aa34.47■■■■□ 3.11
CITED1-210ENST00000454225 RALBP1Q15311 655 aa34.47■■■■□ 3.11
CITED1-210ENST00000454225 MYH14Q7Z406 1995 aaKnown RBP34.46■■■■□ 3.11
CITED1-210ENST00000454225 TEFQ10587 303 aa34.45■■■■□ 3.11
CITED1-210ENST00000454225 CICQ96RK0 1608 aaPredicted RBP34.44■■■■□ 3.1
CITED1-210ENST00000454225 CRKLP46109 303 aaKnown RBP34.43■■■■□ 3.1
CITED1-210ENST00000454225 TRAPPC3LQ5T215 181 aa34.43■■■■□ 3.1
CITED1-210ENST00000454225 KCPQ6ZWJ8 1503 aa34.43■■■■□ 3.1
CITED1-210ENST00000454225 RPS6KA4O75676 772 aa34.42■■■■□ 3.1
CITED1-210ENST00000454225 DNAJC10Q8IXB1 793 aa34.42■■■■□ 3.1
CITED1-210ENST00000454225 CEMIPQ8WUJ3 1361 aa34.39■■■■□ 3.1
CITED1-210ENST00000454225 ADRA2BP18089 450 aa34.39■■■■□ 3.1
CITED1-210ENST00000454225 SIPA1L3O60292 1781 aaPredicted RBP34.39■■■■□ 3.1
CITED1-210ENST00000454225 TTC5Q8N0Z6 440 aa34.38■■■■□ 3.09
CITED1-210ENST00000454225 ARHGEF1Q92888 912 aaKnown RBP34.38■■■■□ 3.09
CITED1-210ENST00000454225 UBR2Q8IWV8 1755 aa34.37■■■■□ 3.09
CITED1-210ENST00000454225 NLGN2Q8NFZ4 835 aa34.36■■■■□ 3.09
CITED1-210ENST00000454225 RTF1Q92541 710 aaKnown RBP34.36■■■■□ 3.09
CITED1-210ENST00000454225 RFC4P35249 363 aa34.35■■■■□ 3.09
CITED1-210ENST00000454225 INTS5Q6P9B9 1019 aaKnown RBP34.35■■■■□ 3.09
CITED1-210ENST00000454225 MYBBP1AQ9BQG0 1328 aaKnown RBP34.34■■■■□ 3.09
CITED1-210ENST00000454225 NEFMP07197 916 aa34.34■■■■□ 3.09
CITED1-210ENST00000454225 C4AP0C0L4 1744 aa34.33■■■■□ 3.09
CITED1-210ENST00000454225 ZNF790Q6PG37 636 aa34.33■■■■□ 3.09
CITED1-210ENST00000454225 MCM10Q7L590 875 aa34.33■■■■□ 3.09
CITED1-210ENST00000454225 CCDC87Q9NVE4 849 aa34.33■■■■□ 3.09
CITED1-210ENST00000454225 CYP19A1P11511 503 aaPredicted RBP34.32■■■■□ 3.08
CITED1-210ENST00000454225 VSIG10Q8N0Z9 540 aa34.32■■■■□ 3.08
CITED1-210ENST00000454225 ZNF496Q96IT1 587 aaPredicted RBP34.31■■■■□ 3.08
CITED1-210ENST00000454225 DCTN1Q14203 1278 aa34.3■■■■□ 3.08
CITED1-210ENST00000454225 PLEKHF1Q96S99 279 aa34.3■■■■□ 3.08
CITED1-210ENST00000454225 BTBD11A6QL63 1104 aa34.29■■■■□ 3.08
CITED1-210ENST00000454225 MMP10P09238 476 aa34.29■■■■□ 3.08
CITED1-210ENST00000454225 GYS1P13807 737 aa34.28■■■■□ 3.08
CITED1-210ENST00000454225 NLGN1Q8N2Q7 840 aa34.28■■■■□ 3.08
CITED1-210ENST00000454225 CD2APQ9Y5K6 639 aa34.28■■■■□ 3.08
CITED1-210ENST00000454225 HEG1Q9ULI3 1381 aa34.27■■■■□ 3.08
CITED1-210ENST00000454225 HTATSF1O43719 755 aaKnown RBP34.27■■■■□ 3.08
CITED1-210ENST00000454225 UTRNP46939 3433 aa34.26■■■■□ 3.08
CITED1-210ENST00000454225 KCNQ3O43525 872 aa34.26■■■■□ 3.08
CITED1-210ENST00000454225 GPR162Q16538 588 aa34.26■■■■□ 3.08
CITED1-210ENST00000454225 PELP1Q8IZL8 1130 aaKnown RBP34.26■■■■□ 3.08
CITED1-210ENST00000454225 PNNQ9H307 717 aaKnown RBP34.26■■■■□ 3.08
CITED1-210ENST00000454225 SRP68Q9UHB9 627 aaKnown RBP34.26■■■■□ 3.08
CITED1-210ENST00000454225 ZBTB1Q9Y2K1 713 aa34.26■■■■□ 3.08
CITED1-210ENST00000454225 SOS1Q07889 1333 aaPredicted RBP34.26■■■■□ 3.07
CITED1-210ENST00000454225 DLG5Q8TDM6 1919 aa34.25■■■■□ 3.07
CITED1-210ENST00000454225 MAPK8IP3Q9UPT6 1336 aa34.25■■■■□ 3.07
CITED1-210ENST00000454225 FMNL2Q96PY5 1086 aa34.24■■■■□ 3.07
CITED1-210ENST00000454225 USP42Q9H9J4 1324 aaKnown RBP34.24■■■■□ 3.07
CITED1-210ENST00000454225 STARD3NLO95772 234 aa34.23■■■■□ 3.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms