RNA–Protein interactions for RNA: ENST00000454137.5

MSH6-205, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 725 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-205ENST00000454137 NUTM2GQ5VZR2 741 aa7.81□□□□□ -1.16
MSH6-205ENST00000454137 SULT6B1Q6IMI4 303 aa7.81□□□□□ -1.16
MSH6-205ENST00000454137 ERICH6Q7L0X2 663 aa7.81□□□□□ -1.16
MSH6-205ENST00000454137 GAS2L2Q8NHY3 880 aa7.81□□□□□ -1.16
MSH6-205ENST00000454137 LRRC59Q96AG4 307 aaKnown RBP7.81□□□□□ -1.16
MSH6-205ENST00000454137 PHACTR3Q96KR7 559 aa7.81□□□□□ -1.16
MSH6-205ENST00000454137 BABAM1Q9NWV8 329 aa7.81□□□□□ -1.16
MSH6-205ENST00000454137 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.81□□□□□ -1.16
MSH6-205ENST00000454137 ERBB3P21860 1342 aa7.8□□□□□ -1.16
MSH6-205ENST00000454137 OVOS2A0A0G2JMS6 1433 aa7.8□□□□□ -1.16
MSH6-205ENST00000454137 TOM1O60784 492 aa7.8□□□□□ -1.16
MSH6-205ENST00000454137 HMOX1P09601 288 aa7.8□□□□□ -1.16
MSH6-205ENST00000454137 ZNF853P0CG23 659 aa7.8□□□□□ -1.16
MSH6-205ENST00000454137 XPCQ01831 940 aaPredicted RBP7.8□□□□□ -1.16
MSH6-205ENST00000454137 NEUROD2Q15784 382 aa7.8□□□□□ -1.16
MSH6-205ENST00000454137 IFT57Q9NWB7 429 aa7.8□□□□□ -1.16
MSH6-205ENST00000454137 TRPC6Q9Y210 931 aa7.8□□□□□ -1.16
MSH6-205ENST00000454137 LRRC37A3O60309 1634 aa7.8□□□□□ -1.16
MSH6-205ENST00000454137 COL16A1Q07092 1604 aaPredicted RBP7.8□□□□□ -1.16
MSH6-205ENST00000454137 ADAMTS7Q9UKP4 1686 aa7.79□□□□□ -1.16
MSH6-205ENST00000454137 CACNA1FO60840 1977 aa7.79□□□□□ -1.16
MSH6-205ENST00000454137 PHLPP1O60346 1717 aa7.79□□□□□ -1.16
MSH6-205ENST00000454137 GNAI1P63096 354 aa7.79□□□□□ -1.16
MSH6-205ENST00000454137 CAMK2BQ13554 666 aa7.79□□□□□ -1.16
MSH6-205ENST00000454137 AMOTQ4VCS5 1084 aa7.79□□□□□ -1.16
MSH6-205ENST00000454137 CCDC136Q96JN2 1154 aa7.79□□□□□ -1.16
MSH6-205ENST00000454137 COL14A1Q05707 1796 aaKnown RBP7.79□□□□□ -1.16
MSH6-205ENST00000454137 VIRMAQ69YN4 1812 aaKnown RBP7.78□□□□□ -1.16
MSH6-205ENST00000454137 SEMA3EO15041 775 aa7.78□□□□□ -1.16
MSH6-205ENST00000454137 BRPF1P55201 1214 aaPredicted RBP7.78□□□□□ -1.16
MSH6-205ENST00000454137 NBPF6Q5VWK0 638 aa7.78□□□□□ -1.16
MSH6-205ENST00000454137 AEBP1Q8IUX7 1158 aa7.78□□□□□ -1.16
MSH6-205ENST00000454137 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.78□□□□□ -1.16
MSH6-205ENST00000454137 ANKRD24Q8TF21 1146 aa7.78□□□□□ -1.16
MSH6-205ENST00000454137 NBPF4Q96M43 638 aa7.78□□□□□ -1.16
MSH6-205ENST00000454137 PKD1L3Q7Z443 1732 aa7.78□□□□□ -1.16
MSH6-205ENST00000454137 SOS1Q07889 1333 aaPredicted RBP7.78□□□□□ -1.16
MSH6-205ENST00000454137 KIAA0232Q92628 1395 aa7.77□□□□□ -1.17
MSH6-205ENST00000454137 TMEM132AQ24JP5 1023 aa7.77□□□□□ -1.17
MSH6-205ENST00000454137 DDX17Q92841 729 aaKnown RBP7.77□□□□□ -1.17
MSH6-205ENST00000454137 BMP2KQ9NSY1 1161 aaPredicted RBP7.77□□□□□ -1.17
MSH6-205ENST00000454137 AXIN2Q9Y2T1 843 aa7.77□□□□□ -1.17
MSH6-205ENST00000454137 PARP4Q9UKK3 1724 aaKnown RBP7.77□□□□□ -1.17
MSH6-205ENST00000454137 CEMIPQ8WUJ3 1361 aa7.76□□□□□ -1.17
MSH6-205ENST00000454137 MAP3K5Q99683 1374 aa7.76□□□□□ -1.17
MSH6-205ENST00000454137 NWD2Q9ULI1 1742 aa7.76□□□□□ -1.17
MSH6-205ENST00000454137 GNAT3A8MTJ3 354 aa7.76□□□□□ -1.17
MSH6-205ENST00000454137 CHL1O00533 1208 aa7.76□□□□□ -1.17
MSH6-205ENST00000454137 MTHFSDQ2M296 383 aaKnown RBP7.76□□□□□ -1.17
MSH6-205ENST00000454137 PLEKHO1Q53GL0 409 aaPredicted RBP7.76□□□□□ -1.17
MSH6-205ENST00000454137 GPHNQ9NQX3 736 aaPredicted RBP7.76□□□□□ -1.17
MSH6-205ENST00000454137 CRB1P82279 1406 aa7.76□□□□□ -1.17
MSH6-205ENST00000454137 WDR17Q8IZU2 1322 aa7.76□□□□□ -1.17
MSH6-205ENST00000454137 COL5A2P05997 1499 aaPredicted RBP7.75□□□□□ -1.17
MSH6-205ENST00000454137 SIPA1L3O60292 1781 aaPredicted RBP7.75□□□□□ -1.17
MSH6-205ENST00000454137 SCN11AQ9UI33 1791 aa7.75□□□□□ -1.17
MSH6-205ENST00000454137 PLIN1O60240 522 aa7.75□□□□□ -1.17
MSH6-205ENST00000454137 ZC3H6P61129 1189 aaKnown RBP7.75□□□□□ -1.17
MSH6-205ENST00000454137 AAMPQ13685 434 aa7.75□□□□□ -1.17
MSH6-205ENST00000454137 ALDH1L2Q3SY69 923 aa7.75□□□□□ -1.17
MSH6-205ENST00000454137 AKAP4Q5JQC9 854 aa7.75□□□□□ -1.17
MSH6-205ENST00000454137 ZC3H15Q8WU90 426 aaKnown RBP7.75□□□□□ -1.17
MSH6-205ENST00000454137 PLCH1Q4KWH8 1693 aa7.75□□□□□ -1.17
MSH6-205ENST00000454137 MS4A1P11836 297 aa7.74□□□□□ -1.17
MSH6-205ENST00000454137 RARSP54136 660 aaKnown RBP7.74□□□□□ -1.17
MSH6-205ENST00000454137 PDE3AQ14432 1141 aa7.74□□□□□ -1.17
MSH6-205ENST00000454137 PPP1R15BQ5SWA1 713 aa7.74□□□□□ -1.17
MSH6-205ENST00000454137 EXOC6Q8TAG9 804 aa7.74□□□□□ -1.17
MSH6-205ENST00000454137 RTF1Q92541 710 aaKnown RBP7.74□□□□□ -1.17
MSH6-205ENST00000454137 CARD10Q9BWT7 1032 aa7.74□□□□□ -1.17
MSH6-205ENST00000454137 CHMP4AQ9BY43 222 aa7.74□□□□□ -1.17
MSH6-205ENST00000454137 PRDM11Q9NQV5 511 aa7.74□□□□□ -1.17
MSH6-205ENST00000454137 KDM3BQ7LBC6 1761 aa7.74□□□□□ -1.17
MSH6-205ENST00000454137 TCERG1O14776 1098 aaKnown RBP7.73□□□□□ -1.17
MSH6-205ENST00000454137 ANP32AP39687 249 aaKnown RBP7.73□□□□□ -1.17
MSH6-205ENST00000454137 CABLES1Q8TDN4 633 aa7.73□□□□□ -1.17
MSH6-205ENST00000454137 LTV1Q96GA3 475 aaPredicted RBP7.73□□□□□ -1.17
MSH6-205ENST00000454137 CRBNQ96SW2 442 aa7.73□□□□□ -1.17
MSH6-205ENST00000454137 NOP58Q9Y2X3 529 aaKnown RBP7.73□□□□□ -1.17
MSH6-205ENST00000454137 HAX1O00165 279 aa7.72□□□□□ -1.17
MSH6-205ENST00000454137 GALR2O43603 387 aaPredicted RBP7.72□□□□□ -1.17
MSH6-205ENST00000454137 BCAR3O75815 825 aa7.72□□□□□ -1.17
MSH6-205ENST00000454137 HSP90AB1P08238 724 aaKnown RBP7.72□□□□□ -1.17
MSH6-205ENST00000454137 TATP17735 454 aaPredicted RBP7.72□□□□□ -1.17
MSH6-205ENST00000454137 EXOSC9Q06265 439 aaKnown RBP7.72□□□□□ -1.17
MSH6-205ENST00000454137 IER5LQ5T953 404 aa7.72□□□□□ -1.17
MSH6-205ENST00000454137 C20orf194Q5TEA3 1177 aa7.72□□□□□ -1.17
MSH6-205ENST00000454137 CERKQ8TCT0 537 aa7.72□□□□□ -1.17
MSH6-205ENST00000454137 RAPGEF4Q8WZA2 1011 aa7.72□□□□□ -1.17
MSH6-205ENST00000454137 ARHGAP45Q92619 1136 aa7.72□□□□□ -1.17
MSH6-205ENST00000454137 TSR2Q969E8 191 aaKnown RBP7.72□□□□□ -1.17
MSH6-205ENST00000454137 MBIPQ9NS73 344 aa7.72□□□□□ -1.17
MSH6-205ENST00000454137 SPG7Q9UQ90 795 aa7.72□□□□□ -1.17
MSH6-205ENST00000454137 WNK3Q9BYP7 1800 aa7.72□□□□□ -1.17
MSH6-205ENST00000454137 NRAPQ86VF7 1730 aa7.72□□□□□ -1.17
MSH6-205ENST00000454137 MRC1P22897 1456 aa7.71□□□□□ -1.18
MSH6-205ENST00000454137 FAM83GA6ND36 823 aa7.71□□□□□ -1.18
MSH6-205ENST00000454137 SPDYE16A6NNV3 312 aaPredicted RBP7.71□□□□□ -1.18
MSH6-205ENST00000454137 G3V3G9 751 aa7.71□□□□□ -1.18
MSH6-205ENST00000454137 VAMP4O75379 141 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms