RNA–Protein interactions for RNA: ENST00000453727.6

LMO3-210, Transcript of LIM domain only 3, humanhuman

TSL 5

Gene LMO3, Length 2,403 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-210ENST00000453727 C8orf58Q8NAV2 365 aa10.79□□□□□ -0.68
LMO3-210ENST00000453727 SMC4Q9NTJ3 1288 aa10.79□□□□□ -0.68
LMO3-210ENST00000453727 SPATA31A6Q5VVP1 1343 aa10.79□□□□□ -0.68
LMO3-210ENST00000453727 AKAP4Q5JQC9 854 aa10.78□□□□□ -0.68
LMO3-210ENST00000453727 C1orf141Q5JVX7 400 aa10.78□□□□□ -0.68
LMO3-210ENST00000453727 PLCH1Q4KWH8 1693 aa10.78□□□□□ -0.68
LMO3-210ENST00000453727 MS4A1P11836 297 aa10.78□□□□□ -0.68
LMO3-210ENST00000453727 TWISTNBQ3B726 338 aaPredicted RBP10.78□□□□□ -0.68
LMO3-210ENST00000453727 LGR6Q9HBX8 967 aa10.78□□□□□ -0.68
LMO3-210ENST00000453727 CEMIPQ8WUJ3 1361 aa10.77□□□□□ -0.68
LMO3-210ENST00000453727 IL2RBP14784 551 aa10.77□□□□□ -0.68
LMO3-210ENST00000453727 KRT24Q2M2I5 525 aa10.77□□□□□ -0.68
LMO3-210ENST00000453727 C8orf37Q96NL8 207 aa10.77□□□□□ -0.68
LMO3-210ENST00000453727 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.77□□□□□ -0.68
LMO3-210ENST00000453727 TSPYL4Q9UJ04 414 aa10.77□□□□□ -0.68
LMO3-210ENST00000453727 SPG7Q9UQ90 795 aa10.77□□□□□ -0.68
LMO3-210ENST00000453727 TNNQ9UQP3 1299 aa10.77□□□□□ -0.68
LMO3-210ENST00000453727 ALDH1L2Q3SY69 923 aa10.77□□□□□ -0.69
LMO3-210ENST00000453727 MPRIPQ6WCQ1 1025 aa10.77□□□□□ -0.69
LMO3-210ENST00000453727 NGLY1Q96IV0 654 aa10.77□□□□□ -0.69
LMO3-210ENST00000453727 PLEKHG2Q9H7P9 1386 aa10.76□□□□□ -0.69
LMO3-210ENST00000453727 PDE3AQ14432 1141 aa10.76□□□□□ -0.69
LMO3-210ENST00000453727 L1TD1Q5T7N2 865 aaKnown RBP10.76□□□□□ -0.69
LMO3-210ENST00000453727 PANK1Q8TE04 598 aa10.76□□□□□ -0.69
LMO3-210ENST00000453727 ZNF428Q96B54 188 aa10.76□□□□□ -0.69
LMO3-210ENST00000453727 LRP6O75581 1613 aa10.76□□□□□ -0.69
LMO3-210ENST00000453727 OVOS2A0A0G2JMS6 1433 aa10.76□□□□□ -0.69
LMO3-210ENST00000453727 PKD1L3Q7Z443 1732 aa10.76□□□□□ -0.69
LMO3-210ENST00000453727 SLIT2O94813 1529 aa10.76□□□□□ -0.69
LMO3-210ENST00000453727 RLBP1P12271 317 aa10.75□□□□□ -0.69
LMO3-210ENST00000453727 TAF7Q15545 349 aaPredicted RBP10.75□□□□□ -0.69
LMO3-210ENST00000453727 IFNL2Q8IZJ0 200 aa10.75□□□□□ -0.69
LMO3-210ENST00000453727 PARP4Q9UKK3 1724 aaKnown RBP10.75□□□□□ -0.69
LMO3-210ENST00000453727 CYP27B1O15528 508 aa10.75□□□□□ -0.69
LMO3-210ENST00000453727 RNMTO43148 476 aaKnown RBP10.75□□□□□ -0.69
LMO3-210ENST00000453727 PHKG2P15735 406 aa10.75□□□□□ -0.69
LMO3-210ENST00000453727 ZKSCAN2Q63HK3 967 aa10.75□□□□□ -0.69
LMO3-210ENST00000453727 ZCRB1Q8TBF4 217 aaKnown RBP10.75□□□□□ -0.69
LMO3-210ENST00000453727 CLUAP1Q96AJ1 413 aa10.75□□□□□ -0.69
LMO3-210ENST00000453727 NOB1Q9ULX3 412 aaKnown RBP10.75□□□□□ -0.69
LMO3-210ENST00000453727 ADAMTS7Q9UKP4 1686 aa10.75□□□□□ -0.69
LMO3-210ENST00000453727 NRAPQ86VF7 1730 aa10.75□□□□□ -0.69
LMO3-210ENST00000453727 NWD2Q9ULI1 1742 aa10.75□□□□□ -0.69
LMO3-210ENST00000453727 MRPL50Q8N5N7 158 aaKnown RBP10.74□□□□□ -0.69
LMO3-210ENST00000453727 COG6Q9Y2V7 657 aa10.74□□□□□ -0.69
LMO3-210ENST00000453727 KDM3BQ7LBC6 1761 aa10.74□□□□□ -0.69
LMO3-210ENST00000453727 BRPF1P55201 1214 aaPredicted RBP10.74□□□□□ -0.69
LMO3-210ENST00000453727 TEFQ10587 303 aa10.74□□□□□ -0.69
LMO3-210ENST00000453727 UNC5CLQ8IV45 518 aa10.74□□□□□ -0.69
LMO3-210ENST00000453727 BABAM1Q9NWV8 329 aa10.74□□□□□ -0.69
LMO3-210ENST00000453727 CCDC9Q9Y3X0 531 aaKnown RBP10.74□□□□□ -0.69
LMO3-210ENST00000453727 FRAT2O75474 233 aaPredicted RBP10.73□□□□□ -0.69
LMO3-210ENST00000453727 TRIM27P14373 513 aa10.73□□□□□ -0.69
LMO3-210ENST00000453727 CLCN1P35523 988 aa10.73□□□□□ -0.69
LMO3-210ENST00000453727 MEX3CQ5U5Q3 659 aaKnown RBP10.73□□□□□ -0.69
LMO3-210ENST00000453727 FNBP4Q8N3X1 1017 aaPredicted RBP10.73□□□□□ -0.69
LMO3-210ENST00000453727 SPATA31A1Q5TZJ5 1347 aa10.73□□□□□ -0.69
LMO3-210ENST00000453727 KIF16BQ96L93 1317 aa10.73□□□□□ -0.69
LMO3-210ENST00000453727 PCDH11XQ9BZA7 1347 aa10.73□□□□□ -0.69
LMO3-210ENST00000453727 PCDH11YQ9BZA8 1340 aa10.73□□□□□ -0.69
LMO3-210ENST00000453727 SIPA1L3O60292 1781 aaPredicted RBP10.73□□□□□ -0.69
LMO3-210ENST00000453727 SCN11AQ9UI33 1791 aa10.73□□□□□ -0.69
LMO3-210ENST00000453727 PDIA4P13667 645 aaKnown RBP10.73□□□□□ -0.69
LMO3-210ENST00000453727 ATF7IPQ6VMQ6 1270 aa10.73□□□□□ -0.69
LMO3-210ENST00000453727 BCL9LQ86UU0 1499 aa10.73□□□□□ -0.69
LMO3-210ENST00000453727 DDX54Q8TDD1 881 aaKnown RBP10.73□□□□□ -0.69
LMO3-210ENST00000453727 PDCL3Q9H2J4 239 aa10.73□□□□□ -0.69
LMO3-210ENST00000453727 DZIP1LQ8IYY4 767 aaKnown RBP10.72□□□□□ -0.69
LMO3-210ENST00000453727 KDM6AO15550 1401 aaPredicted RBP10.72□□□□□ -0.69
LMO3-210ENST00000453727 SPATA31A5Q5VU36 1347 aa10.72□□□□□ -0.69
LMO3-210ENST00000453727 SPATA31A7Q8IWB4 1347 aa10.72□□□□□ -0.69
LMO3-210ENST00000453727 SLC4A3P48751 1232 aa10.72□□□□□ -0.69
LMO3-210ENST00000453727 DCAF5Q96JK2 942 aa10.72□□□□□ -0.69
LMO3-210ENST00000453727 USP21Q9UK80 565 aa10.72□□□□□ -0.69
LMO3-210ENST00000453727 THRAP3Q9Y2W1 955 aaKnown RBP10.72□□□□□ -0.69
LMO3-210ENST00000453727 DISP2A7MBM2 1401 aa10.71□□□□□ -0.69
LMO3-210ENST00000453727 IPO8O15397 1037 aaKnown RBP10.71□□□□□ -0.69
LMO3-210ENST00000453727 HSP90AB1P08238 724 aaKnown RBP10.71□□□□□ -0.69
LMO3-210ENST00000453727 FTSJ3Q8IY81 847 aaKnown RBP10.71□□□□□ -0.69
LMO3-210ENST00000453727 SHANK3Q9BYB0 1731 aa10.71□□□□□ -0.7
LMO3-210ENST00000453727 BTBD11A6QL63 1104 aa10.7□□□□□ -0.7
LMO3-210ENST00000453727 KCNQ3O43525 872 aa10.7□□□□□ -0.7
LMO3-210ENST00000453727 EXOC5O00471 708 aa10.69□□□□□ -0.7
LMO3-210ENST00000453727 MVPQ14764 893 aaKnown RBP10.69□□□□□ -0.7
LMO3-210ENST00000453727 VPS72Q15906 364 aa10.69□□□□□ -0.7
LMO3-210ENST00000453727 NFATC2IPQ8NCF5 419 aa10.69□□□□□ -0.7
LMO3-210ENST00000453727 CDCA7Q9BWT1 371 aaPredicted RBP10.69□□□□□ -0.7
LMO3-210ENST00000453727 EIF4A1P60842 406 aaKnown RBP10.69□□□□□ -0.7
LMO3-210ENST00000453727 ARHGAP45Q92619 1136 aa10.69□□□□□ -0.7
LMO3-210ENST00000453727 SLC52A2Q9HAB3 445 aa10.69□□□□□ -0.7
LMO3-210ENST00000453727 AFF2P51816 1311 aa10.69□□□□□ -0.7
LMO3-210ENST00000453727 TMEM57Q8N5G2 664 aa10.68□□□□□ -0.7
LMO3-210ENST00000453727 NKX1-1Q15270 411 aaPredicted RBP10.68□□□□□ -0.7
LMO3-210ENST00000453727 DDB1Q16531 1140 aa10.68□□□□□ -0.7
LMO3-210ENST00000453727 BARGINQ6ZT62 677 aa10.68□□□□□ -0.7
LMO3-210ENST00000453727 PRDM4Q9UKN5 801 aa10.68□□□□□ -0.7
LMO3-210ENST00000453727 WNK3Q9BYP7 1800 aa10.68□□□□□ -0.7
LMO3-210ENST00000453727 MRC1P22897 1456 aa10.68□□□□□ -0.7
LMO3-210ENST00000453727 SLC4A2P04920 1241 aa10.67□□□□□ -0.7
LMO3-210ENST00000453727 CABP4P57796 275 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms