RNA–Protein interactions for RNA: ENST00000453259.2

LYSMD3-202, Transcript of LysM domain containing 3, humanhuman

TSL 3

Gene LYSMD3, Length 553 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-202ENST00000453259 NLGN1Q8N2Q7 840 aa19.78■□□□□ 0.76
LYSMD3-202ENST00000453259 KDRP35968 1356 aa19.78■□□□□ 0.76
LYSMD3-202ENST00000453259 HSP90AB1P08238 724 aaKnown RBP19.77■□□□□ 0.76
LYSMD3-202ENST00000453259 ITPK1Q13572 414 aa19.77■□□□□ 0.76
LYSMD3-202ENST00000453259 ASAP1Q9ULH1 1129 aa19.77■□□□□ 0.76
LYSMD3-202ENST00000453259 PXDNLA1KZ92 1463 aa19.76■□□□□ 0.75
LYSMD3-202ENST00000453259 ERVV-2B6SEH9 535 aa19.76■□□□□ 0.75
LYSMD3-202ENST00000453259 MMP10P09238 476 aa19.76■□□□□ 0.75
LYSMD3-202ENST00000453259 RC3H1Q5TC82 1133 aaKnown RBP19.76■□□□□ 0.75
LYSMD3-202ENST00000453259 RTCBQ9Y3I0 505 aaKnown RBP19.76■□□□□ 0.75
LYSMD3-202ENST00000453259 ATG3Q9NT62 314 aa19.75■□□□□ 0.75
LYSMD3-202ENST00000453259 POLKQ9UBT6 870 aa19.75■□□□□ 0.75
LYSMD3-202ENST00000453259 C10orf71Q711Q0 1435 aa19.75■□□□□ 0.75
LYSMD3-202ENST00000453259 TRAPPC3LQ5T215 181 aa19.74■□□□□ 0.75
LYSMD3-202ENST00000453259 ZNF526Q8TF50 670 aaPredicted RBP19.74■□□□□ 0.75
LYSMD3-202ENST00000453259 DCAF5Q96JK2 942 aa19.74■□□□□ 0.75
LYSMD3-202ENST00000453259 CNTNAP4Q9C0A0 1308 aa19.74■□□□□ 0.75
LYSMD3-202ENST00000453259 KIF3CO14782 793 aa19.73■□□□□ 0.75
LYSMD3-202ENST00000453259 KIAA1551Q9HCM1 1747 aa19.72■□□□□ 0.75
LYSMD3-202ENST00000453259 CCDC87Q9NVE4 849 aa19.72■□□□□ 0.75
LYSMD3-202ENST00000453259 COL5A3P25940 1745 aaPredicted RBP19.71■□□□□ 0.75
LYSMD3-202ENST00000453259 APLP1P51693 650 aa19.71■□□□□ 0.75
LYSMD3-202ENST00000453259 EIF4A2Q14240 407 aaKnown RBP19.71■□□□□ 0.75
LYSMD3-202ENST00000453259 TOMM70O94826 608 aa19.7■□□□□ 0.74
LYSMD3-202ENST00000453259 AMOTQ4VCS5 1084 aa19.7■□□□□ 0.74
LYSMD3-202ENST00000453259 C4AP0C0L4 1744 aa19.7■□□□□ 0.74
LYSMD3-202ENST00000453259 RPS6KA4O75676 772 aa19.69■□□□□ 0.74
LYSMD3-202ENST00000453259 PLEKHO1Q53GL0 409 aaPredicted RBP19.69■□□□□ 0.74
LYSMD3-202ENST00000453259 SMIM5Q71RC9 77 aa19.69■□□□□ 0.74
LYSMD3-202ENST00000453259 RFC4P35249 363 aa19.68■□□□□ 0.74
LYSMD3-202ENST00000453259 GYS1P13807 737 aa19.67■□□□□ 0.74
LYSMD3-202ENST00000453259 ARHGEF1Q92888 912 aaKnown RBP19.67■□□□□ 0.74
LYSMD3-202ENST00000453259 BCS1LQ9Y276 419 aa19.67■□□□□ 0.74
LYSMD3-202ENST00000453259 PARP3Q9Y6F1 533 aa19.67■□□□□ 0.74
LYSMD3-202ENST00000453259 RBM42Q9BTD8 480 aaKnown RBP19.66■□□□□ 0.74
LYSMD3-202ENST00000453259 WWC3Q9ULE0 1092 aa19.66■□□□□ 0.74
LYSMD3-202ENST00000453259 CLSPNQ9HAW4 1339 aa19.66■□□□□ 0.74
LYSMD3-202ENST00000453259 BRCA1P38398 1863 aaKnown RBP19.66■□□□□ 0.74
LYSMD3-202ENST00000453259 SLC4A9Q96Q91 983 aa19.65■□□□□ 0.74
LYSMD3-202ENST00000453259 N4BP2Q86UW6 1770 aaPredicted RBP19.65■□□□□ 0.74
LYSMD3-202ENST00000453259 A0A0G2JLW4 131 aa19.64■□□□□ 0.73
LYSMD3-202ENST00000453259 CABP4P57796 275 aa19.64■□□□□ 0.73
LYSMD3-202ENST00000453259 KDM6AO15550 1401 aaPredicted RBP19.64■□□□□ 0.73
LYSMD3-202ENST00000453259 ARFGEF1Q9Y6D6 1849 aa19.64■□□□□ 0.73
LYSMD3-202ENST00000453259 ARHGAP27Q6ZUM4 889 aa19.63■□□□□ 0.73
LYSMD3-202ENST00000453259 FCHSD2O94868 740 aa19.62■□□□□ 0.73
LYSMD3-202ENST00000453259 DPEP1P16444 411 aa19.62■□□□□ 0.73
LYSMD3-202ENST00000453259 C1orf141Q5JVX7 400 aa19.62■□□□□ 0.73
LYSMD3-202ENST00000453259 ZNF530Q6P9A1 599 aaPredicted RBP19.62■□□□□ 0.73
LYSMD3-202ENST00000453259 RBM46Q8TBY0 533 aaKnown RBP19.62■□□□□ 0.73
LYSMD3-202ENST00000453259 PIM2Q9P1W9 311 aa19.62■□□□□ 0.73
LYSMD3-202ENST00000453259 USP42Q9H9J4 1324 aaKnown RBP19.6■□□□□ 0.73
LYSMD3-202ENST00000453259 MTHFSP49914 203 aa19.6■□□□□ 0.73
LYSMD3-202ENST00000453259 TRIM26Q12899 539 aaPredicted RBP19.6■□□□□ 0.73
LYSMD3-202ENST00000453259 KDM2BQ8NHM5 1336 aa19.59■□□□□ 0.73
LYSMD3-202ENST00000453259 ZC3H4Q9UPT8 1303 aaKnown RBP19.59■□□□□ 0.73
LYSMD3-202ENST00000453259 TNNT2P45379 298 aaPredicted RBP19.59■□□□□ 0.73
LYSMD3-202ENST00000453259 FSTL1Q12841 308 aa19.59■□□□□ 0.73
LYSMD3-202ENST00000453259 MYH14Q7Z406 1995 aaKnown RBP19.58■□□□□ 0.73
LYSMD3-202ENST00000453259 KCNA3P22001 575 aa19.58■□□□□ 0.72
LYSMD3-202ENST00000453259 CRKLP46109 303 aaKnown RBP19.58■□□□□ 0.72
LYSMD3-202ENST00000453259 DALRD3Q5D0E6 543 aaKnown RBP19.58■□□□□ 0.72
LYSMD3-202ENST00000453259 C16orf71Q8IYS4 520 aaPredicted RBP19.58■□□□□ 0.72
LYSMD3-202ENST00000453259 DNAJC5GQ8N7S2 189 aa19.58■□□□□ 0.72
LYSMD3-202ENST00000453259 C9orf131Q5VYM1 1079 aa19.57■□□□□ 0.72
LYSMD3-202ENST00000453259 NMRK2Q9NPI5 230 aa19.56■□□□□ 0.72
LYSMD3-202ENST00000453259 PTCD1O75127 700 aaKnown RBP19.55■□□□□ 0.72
LYSMD3-202ENST00000453259 TJP1Q07157 1748 aa19.55■□□□□ 0.72
LYSMD3-202ENST00000453259 NFATC2IPQ8NCF5 419 aa19.55■□□□□ 0.72
LYSMD3-202ENST00000453259 WDR90Q96KV7 1748 aa19.55■□□□□ 0.72
LYSMD3-202ENST00000453259 TNRC6CQ9HCJ0 1690 aaKnown RBP19.55■□□□□ 0.72
LYSMD3-202ENST00000453259 EIF4G2P78344 907 aaKnown RBP eCLIP19.54■□□□□ 0.72
LYSMD3-202ENST00000453259 SCN11AQ9UI33 1791 aa19.53■□□□□ 0.72
LYSMD3-202ENST00000453259 FKBP8Q14318 412 aa19.53■□□□□ 0.72
LYSMD3-202ENST00000453259 PANK3Q9H999 370 aa19.53■□□□□ 0.72
LYSMD3-202ENST00000453259 ZPR1O75312 459 aa19.52■□□□□ 0.72
LYSMD3-202ENST00000453259 DDR1Q08345 913 aa19.52■□□□□ 0.72
LYSMD3-202ENST00000453259 AKAP4Q5JQC9 854 aa19.52■□□□□ 0.72
LYSMD3-202ENST00000453259 MORC1Q86VD1 984 aa19.52■□□□□ 0.72
LYSMD3-202ENST00000453259 POLR3GLQ9BT43 218 aa19.52■□□□□ 0.72
LYSMD3-202ENST00000453259 MRC1P22897 1456 aa19.52■□□□□ 0.72
LYSMD3-202ENST00000453259 ADAMTS7Q9UKP4 1686 aa19.52■□□□□ 0.71
LYSMD3-202ENST00000453259 POLRMTO00411 1230 aaKnown RBP19.51■□□□□ 0.71
LYSMD3-202ENST00000453259 TM4SF1P30408 202 aa19.51■□□□□ 0.71
LYSMD3-202ENST00000453259 SULT6B1Q6IMI4 303 aa19.51■□□□□ 0.71
LYSMD3-202ENST00000453259 AEBP1Q8IUX7 1158 aa19.51■□□□□ 0.71
LYSMD3-202ENST00000453259 INTS5Q6P9B9 1019 aaKnown RBP19.5■□□□□ 0.71
LYSMD3-202ENST00000453259 JMYQ8N9B5 988 aa19.5■□□□□ 0.71
LYSMD3-202ENST00000453259 KLRG1Q96E93 195 aa19.5■□□□□ 0.71
LYSMD3-202ENST00000453259 RNF181Q9P0P0 153 aa19.5■□□□□ 0.71
LYSMD3-202ENST00000453259 SRP68Q9UHB9 627 aaKnown RBP19.5■□□□□ 0.71
LYSMD3-202ENST00000453259 SLC52A2Q9HAB3 445 aa19.49■□□□□ 0.71
LYSMD3-202ENST00000453259 KCPQ6ZWJ8 1503 aa19.49■□□□□ 0.71
LYSMD3-202ENST00000453259 SOS1Q07889 1333 aaPredicted RBP19.49■□□□□ 0.71
LYSMD3-202ENST00000453259 IL13P35225 146 aa19.48■□□□□ 0.71
LYSMD3-202ENST00000453259 VSIG10Q8N0Z9 540 aa19.48■□□□□ 0.71
LYSMD3-202ENST00000453259 SMC1BQ8NDV3 1235 aa19.48■□□□□ 0.71
LYSMD3-202ENST00000453259 KNSTRNQ9Y448 316 aa19.48■□□□□ 0.71
LYSMD3-202ENST00000453259 NARFQ9UHQ1 456 aa19.47■□□□□ 0.71
LYSMD3-202ENST00000453259 NRXN2Q9P2S2 1712 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms