RNA–Protein interactions for RNA: ENST00000453135.1

LINC01647-201, Transcript of long intergenic non-protein coding RNA 1647, humanhuman

TSL 1 (best) BASIC

Gene LINC01647, Length 1,285 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01647-201ENST00000453135 BCL9O00512 1426 aa11.54□□□□□ -0.56
LINC01647-201ENST00000453135 HSP90AB1P08238 724 aaKnown RBP11.54□□□□□ -0.56
LINC01647-201ENST00000453135 NKX1-1Q15270 411 aaPredicted RBP11.54□□□□□ -0.56
LINC01647-201ENST00000453135 AKAP4Q5JQC9 854 aa11.54□□□□□ -0.56
LINC01647-201ENST00000453135 PNISRQ8TF01 805 aaKnown RBP11.54□□□□□ -0.56
LINC01647-201ENST00000453135 FAM212AQ96EL1 285 aa11.54□□□□□ -0.56
LINC01647-201ENST00000453135 ACSBG1Q96GR2 724 aa11.54□□□□□ -0.56
LINC01647-201ENST00000453135 CCER2I3L3R5 266 aa11.53□□□□□ -0.56
LINC01647-201ENST00000453135 TRIM37O94972 964 aa11.53□□□□□ -0.56
LINC01647-201ENST00000453135 DCAF8Q5TAQ9 597 aa11.53□□□□□ -0.56
LINC01647-201ENST00000453135 CCDC125Q86Z20 511 aa11.53□□□□□ -0.56
LINC01647-201ENST00000453135 UPF1Q92900 1129 aaKnown RBP eCLIP11.53□□□□□ -0.56
LINC01647-201ENST00000453135 PLEKHF1Q96S99 279 aa11.53□□□□□ -0.56
LINC01647-201ENST00000453135 MAPK8IP3Q9UPT6 1336 aa11.53□□□□□ -0.56
LINC01647-201ENST00000453135 PKD1L3Q7Z443 1732 aa11.52□□□□□ -0.56
LINC01647-201ENST00000453135 SF3B2Q13435 895 aaKnown RBP11.52□□□□□ -0.57
LINC01647-201ENST00000453135 CCDC146Q8IYE0 955 aa11.52□□□□□ -0.57
LINC01647-201ENST00000453135 DCAF5Q96JK2 942 aa11.52□□□□□ -0.57
LINC01647-201ENST00000453135 TSPYL2Q9H2G4 693 aaPredicted RBP11.52□□□□□ -0.57
LINC01647-201ENST00000453135 SOCS7O14512 581 aa11.51□□□□□ -0.57
LINC01647-201ENST00000453135 KCNQ2O43526 872 aa11.51□□□□□ -0.57
LINC01647-201ENST00000453135 PRIM1P49642 420 aaKnown RBP11.51□□□□□ -0.57
LINC01647-201ENST00000453135 GSE1Q14687 1217 aa11.51□□□□□ -0.57
LINC01647-201ENST00000453135 MPRIPQ6WCQ1 1025 aa11.51□□□□□ -0.57
LINC01647-201ENST00000453135 SYTL4Q96C24 671 aaPredicted RBP11.51□□□□□ -0.57
LINC01647-201ENST00000453135 RUNDC1Q96C34 613 aa11.51□□□□□ -0.57
LINC01647-201ENST00000453135 BCL11BQ9C0K0 894 aaPredicted RBP11.51□□□□□ -0.57
LINC01647-201ENST00000453135 SHANK3Q9BYB0 1731 aa11.5□□□□□ -0.57
LINC01647-201ENST00000453135 GNAT3A8MTJ3 354 aa11.5□□□□□ -0.57
LINC01647-201ENST00000453135 ERVV-2B6SEH9 535 aa11.5□□□□□ -0.57
LINC01647-201ENST00000453135 NFE2L2Q16236 605 aa11.5□□□□□ -0.57
LINC01647-201ENST00000453135 FAM9BQ8IZU0 186 aa11.5□□□□□ -0.57
LINC01647-201ENST00000453135 KAT6BQ8WYB5 2073 aa11.49□□□□□ -0.57
LINC01647-201ENST00000453135 RNMTO43148 476 aaKnown RBP11.49□□□□□ -0.57
LINC01647-201ENST00000453135 ECM2O94769 699 aaPredicted RBP11.49□□□□□ -0.57
LINC01647-201ENST00000453135 APBA3O96018 575 aa11.49□□□□□ -0.57
LINC01647-201ENST00000453135 PTF1AQ7RTS3 328 aa11.49□□□□□ -0.57
LINC01647-201ENST00000453135 RTF1Q92541 710 aaKnown RBP11.49□□□□□ -0.57
LINC01647-201ENST00000453135 LGR6Q9HBX8 967 aa11.49□□□□□ -0.57
LINC01647-201ENST00000453135 MAP3K5Q99683 1374 aa11.49□□□□□ -0.57
LINC01647-201ENST00000453135 HTATSF1O43719 755 aaKnown RBP11.48□□□□□ -0.57
LINC01647-201ENST00000453135 BAG6P46379 1132 aa11.48□□□□□ -0.57
LINC01647-201ENST00000453135 CABP4P57796 275 aa11.48□□□□□ -0.57
LINC01647-201ENST00000453135 TMOD3Q9NYL9 352 aa11.48□□□□□ -0.57
LINC01647-201ENST00000453135 KDM6AO15550 1401 aaPredicted RBP11.47□□□□□ -0.57
LINC01647-201ENST00000453135 CD44P16070 742 aaKnown RBP11.47□□□□□ -0.57
LINC01647-201ENST00000453135 TMPOP42166 694 aaKnown RBP11.47□□□□□ -0.57
LINC01647-201ENST00000453135 RIPK4P57078 832 aa11.47□□□□□ -0.57
LINC01647-201ENST00000453135 C19orf67A6NJJ6 358 aa11.46□□□□□ -0.57
LINC01647-201ENST00000453135 APAF1O14727 1248 aa11.46□□□□□ -0.57
LINC01647-201ENST00000453135 NEUROD2Q15784 382 aa11.46□□□□□ -0.57
LINC01647-201ENST00000453135 POTEHQ6S545 545 aa11.46□□□□□ -0.57
LINC01647-201ENST00000453135 MCM10Q7L590 875 aa11.46□□□□□ -0.57
LINC01647-201ENST00000453135 DEFB132Q7Z7B7 95 aa11.46□□□□□ -0.57
LINC01647-201ENST00000453135 NFATC2IPQ8NCF5 419 aa11.46□□□□□ -0.57
LINC01647-201ENST00000453135 IL17REQ8NFR9 667 aa11.46□□□□□ -0.57
LINC01647-201ENST00000453135 PIGBQ92521 554 aa11.46□□□□□ -0.57
LINC01647-201ENST00000453135 SLC52A2Q9HAB3 445 aa11.46□□□□□ -0.57
LINC01647-201ENST00000453135 RRP7AQ9Y3A4 280 aaKnown RBP11.46□□□□□ -0.57
LINC01647-201ENST00000453135 SBF2Q86WG5 1849 aa11.45□□□□□ -0.58
LINC01647-201ENST00000453135 PLSCR1O15162 318 aa11.45□□□□□ -0.58
LINC01647-201ENST00000453135 EN1Q05925 392 aaPredicted RBP11.45□□□□□ -0.58
LINC01647-201ENST00000453135 LMOD3Q0VAK6 560 aa11.45□□□□□ -0.58
LINC01647-201ENST00000453135 TEFQ10587 303 aa11.45□□□□□ -0.58
LINC01647-201ENST00000453135 NHSQ6T4R5 1651 aa11.44□□□□□ -0.58
LINC01647-201ENST00000453135 DCTN1Q14203 1278 aa11.44□□□□□ -0.58
LINC01647-201ENST00000453135 SMARCC1Q92922 1105 aaPredicted RBP11.44□□□□□ -0.58
LINC01647-201ENST00000453135 CAMKK2Q96RR4 588 aa11.44□□□□□ -0.58
LINC01647-201ENST00000453135 DOT1LQ8TEK3 1739 aa11.43□□□□□ -0.58
LINC01647-201ENST00000453135 CEMIPQ8WUJ3 1361 aa11.43□□□□□ -0.58
LINC01647-201ENST00000453135 RGL2O15211 777 aa11.43□□□□□ -0.58
LINC01647-201ENST00000453135 PYGBP11216 843 aa11.43□□□□□ -0.58
LINC01647-201ENST00000453135 EZH2Q15910 746 aaKnown RBP11.43□□□□□ -0.58
LINC01647-201ENST00000453135 ATG3Q9NT62 314 aa11.42□□□□□ -0.58
LINC01647-201ENST00000453135 ASAP1Q9ULH1 1129 aa11.42□□□□□ -0.58
LINC01647-201ENST00000453135 TRIM35Q9UPQ4 493 aa11.42□□□□□ -0.58
LINC01647-201ENST00000453135 TOGARAM1Q9Y4F4 1720 aa11.42□□□□□ -0.58
LINC01647-201ENST00000453135 SENP3-EIF4A1A0A087X0R7 540 aa11.41□□□□□ -0.58
LINC01647-201ENST00000453135 BTBD11A6QL63 1104 aa11.41□□□□□ -0.58
LINC01647-201ENST00000453135 TAF7Q15545 349 aaPredicted RBP11.41□□□□□ -0.58
LINC01647-201ENST00000453135 TXNRD1Q16881 649 aa11.41□□□□□ -0.58
LINC01647-201ENST00000453135 RNF25Q96BH1 459 aaPredicted RBP11.41□□□□□ -0.58
LINC01647-201ENST00000453135 THUMPD2Q9BTF0 503 aaKnown RBP11.41□□□□□ -0.58
LINC01647-201ENST00000453135 SCN11AQ9UI33 1791 aa11.41□□□□□ -0.58
LINC01647-201ENST00000453135 PALLDQ8WX93 1383 aa11.41□□□□□ -0.58
LINC01647-201ENST00000453135 TNS1Q9HBL0 1735 aaKnown RBP11.4□□□□□ -0.58
LINC01647-201ENST00000453135 ADAMTS7Q9UKP4 1686 aa11.4□□□□□ -0.58
LINC01647-201ENST00000453135 MRC1P22897 1456 aa11.4□□□□□ -0.58
LINC01647-201ENST00000453135 EVX2Q03828 476 aa11.4□□□□□ -0.58
LINC01647-201ENST00000453135 SLC39A6Q13433 755 aa11.4□□□□□ -0.58
LINC01647-201ENST00000453135 BTAF1O14981 1849 aa11.39□□□□□ -0.59
LINC01647-201ENST00000453135 ITGB4P16144 1822 aa11.39□□□□□ -0.59
LINC01647-201ENST00000453135 CCDC27Q2M243 656 aa11.39□□□□□ -0.59
LINC01647-201ENST00000453135 SLC27A3Q5K4L6 730 aa11.39□□□□□ -0.59
LINC01647-201ENST00000453135 TTC5Q8N0Z6 440 aa11.39□□□□□ -0.59
LINC01647-201ENST00000453135 NGEFQ8N5V2 710 aa11.39□□□□□ -0.59
LINC01647-201ENST00000453135 CCNL1Q9UK58 526 aaPredicted RBP11.39□□□□□ -0.59
LINC01647-201ENST00000453135 SALL2Q9Y467 1007 aaPredicted RBP11.39□□□□□ -0.59
LINC01647-201ENST00000453135 LOC102724428A0A0B4J2F2 783 aa11.38□□□□□ -0.59
LINC01647-201ENST00000453135 PTCD1O75127 700 aaKnown RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms