RNA–Protein interactions for RNA: ENST00000453030.5

GARNL3-210, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-210ENST00000453030 HSPA5P11021 654 aaKnown RBP16.07■□□□□ 0.16
GARNL3-210ENST00000453030 SSFA2P28290 1259 aa16.07■□□□□ 0.16
GARNL3-210ENST00000453030 ITPK1Q13572 414 aa16.07■□□□□ 0.16
GARNL3-210ENST00000453030 IGSF1Q8N6C5 1336 aa16.07■□□□□ 0.16
GARNL3-210ENST00000453030 N4BP2Q86UW6 1770 aaPredicted RBP16.07■□□□□ 0.16
GARNL3-210ENST00000453030 KIF13BQ9NQT8 1826 aa16.07■□□□□ 0.16
GARNL3-210ENST00000453030 MYH14Q7Z406 1995 aaKnown RBP16.06■□□□□ 0.16
GARNL3-210ENST00000453030 ATP10DQ9P241 1426 aa16.06■□□□□ 0.16
GARNL3-210ENST00000453030 KDRP35968 1356 aa16.06■□□□□ 0.16
GARNL3-210ENST00000453030 ATP6V1AP38606 617 aa16.06■□□□□ 0.16
GARNL3-210ENST00000453030 EIF4G2P78344 907 aaKnown RBP eCLIP16.06■□□□□ 0.16
GARNL3-210ENST00000453030 KIAA1551Q9HCM1 1747 aa16.05■□□□□ 0.16
GARNL3-210ENST00000453030 PLEKHG2Q9H7P9 1386 aa16.05■□□□□ 0.16
GARNL3-210ENST00000453030 PANK3Q9H999 370 aa16.05■□□□□ 0.16
GARNL3-210ENST00000453030 ATG3Q9NT62 314 aa16.05■□□□□ 0.16
GARNL3-210ENST00000453030 SCN11AQ9UI33 1791 aa16.05■□□□□ 0.16
GARNL3-210ENST00000453030 CICQ96RK0 1608 aaPredicted RBP16.05■□□□□ 0.16
GARNL3-210ENST00000453030 KDM6AO15550 1401 aaPredicted RBP16.04■□□□□ 0.16
GARNL3-210ENST00000453030 TJP1Q07157 1748 aa16.02■□□□□ 0.16
GARNL3-210ENST00000453030 ZNF530Q6P9A1 599 aaPredicted RBP16.02■□□□□ 0.16
GARNL3-210ENST00000453030 RBM42Q9BTD8 480 aaKnown RBP16.02■□□□□ 0.16
GARNL3-210ENST00000453030 BRCA1P38398 1863 aaKnown RBP16.01■□□□□ 0.15
GARNL3-210ENST00000453030 AEBP1Q8IUX7 1158 aa16.01■□□□□ 0.15
GARNL3-210ENST00000453030 ADCY9O60503 1353 aa16■□□□□ 0.15
GARNL3-210ENST00000453030 HSP90AB1P08238 724 aaKnown RBP16■□□□□ 0.15
GARNL3-210ENST00000453030 MMP10P09238 476 aa16■□□□□ 0.15
GARNL3-210ENST00000453030 PLEKHO1Q53GL0 409 aaPredicted RBP16■□□□□ 0.15
GARNL3-210ENST00000453030 MORC1Q86VD1 984 aa16■□□□□ 0.15
GARNL3-210ENST00000453030 DCAF5Q96JK2 942 aa16■□□□□ 0.15
GARNL3-210ENST00000453030 SLC4A9Q96Q91 983 aa16■□□□□ 0.15
GARNL3-210ENST00000453030 PXDNLA1KZ92 1463 aa15.99■□□□□ 0.15
GARNL3-210ENST00000453030 ERVV-2B6SEH9 535 aa15.99■□□□□ 0.15
GARNL3-210ENST00000453030 ZNF526Q8TF50 670 aaPredicted RBP15.99■□□□□ 0.15
GARNL3-210ENST00000453030 RTCBQ9Y3I0 505 aaKnown RBP15.99■□□□□ 0.15
GARNL3-210ENST00000453030 CABP4P57796 275 aa15.98■□□□□ 0.15
GARNL3-210ENST00000453030 CCER1Q8TC90 406 aaPredicted RBP15.98■□□□□ 0.15
GARNL3-210ENST00000453030 CNTNAP4Q9C0A0 1308 aa15.97■□□□□ 0.15
GARNL3-210ENST00000453030 C10orf71Q711Q0 1435 aa15.97■□□□□ 0.15
GARNL3-210ENST00000453030 AMOTQ4VCS5 1084 aa15.97■□□□□ 0.15
GARNL3-210ENST00000453030 C1orf141Q5JVX7 400 aa15.97■□□□□ 0.15
GARNL3-210ENST00000453030 GPBP1L1Q9HC44 474 aaPredicted RBP15.97■□□□□ 0.15
GARNL3-210ENST00000453030 MTHFSP49914 203 aa15.96■□□□□ 0.15
GARNL3-210ENST00000453030 TRAPPC3LQ5T215 181 aa15.96■□□□□ 0.15
GARNL3-210ENST00000453030 SULT6B1Q6IMI4 303 aa15.96■□□□□ 0.15
GARNL3-210ENST00000453030 KNSTRNQ9Y448 316 aa15.96■□□□□ 0.15
GARNL3-210ENST00000453030 ARFGEF1Q9Y6D6 1849 aa15.96■□□□□ 0.14
GARNL3-210ENST00000453030 PTCD1O75127 700 aaKnown RBP15.95■□□□□ 0.14
GARNL3-210ENST00000453030 ARHGEF1Q92888 912 aaKnown RBP15.95■□□□□ 0.14
GARNL3-210ENST00000453030 ADRA2BP18089 450 aa15.94■□□□□ 0.14
GARNL3-210ENST00000453030 ADAMTS7Q9UKP4 1686 aa15.93■□□□□ 0.14
GARNL3-210ENST00000453030 GYS1P13807 737 aa15.93■□□□□ 0.14
GARNL3-210ENST00000453030 RFC4P35249 363 aa15.93■□□□□ 0.14
GARNL3-210ENST00000453030 RC3H1Q5TC82 1133 aaKnown RBP15.93■□□□□ 0.14
GARNL3-210ENST00000453030 NLGN1Q8N2Q7 840 aa15.93■□□□□ 0.14
GARNL3-210ENST00000453030 RPS6KA4O75676 772 aa15.92■□□□□ 0.14
GARNL3-210ENST00000453030 IL13P35225 146 aa15.92■□□□□ 0.14
GARNL3-210ENST00000453030 NFATC2IPQ8NCF5 419 aa15.92■□□□□ 0.14
GARNL3-210ENST00000453030 MRC1P22897 1456 aa15.91■□□□□ 0.14
GARNL3-210ENST00000453030 CRKLP46109 303 aaKnown RBP15.91■□□□□ 0.14
GARNL3-210ENST00000453030 AMER1Q5JTC6 1135 aaPredicted RBP15.91■□□□□ 0.14
GARNL3-210ENST00000453030 CCDC87Q9NVE4 849 aa15.91■□□□□ 0.14
GARNL3-210ENST00000453030 BCS1LQ9Y276 419 aa15.91■□□□□ 0.14
GARNL3-210ENST00000453030 AFDNP55196 1824 aaKnown RBP15.91■□□□□ 0.14
GARNL3-210ENST00000453030 KIF7Q2M1P5 1343 aa15.91■□□□□ 0.14
GARNL3-210ENST00000453030 A0A0G2JLW4 131 aa15.9■□□□□ 0.14
GARNL3-210ENST00000453030 SRP68Q9UHB9 627 aaKnown RBP15.9■□□□□ 0.14
GARNL3-210ENST00000453030 PARP3Q9Y6F1 533 aa15.9■□□□□ 0.14
GARNL3-210ENST00000453030 UBR2Q8IWV8 1755 aa15.9■□□□□ 0.14
GARNL3-210ENST00000453030 TGFB2P61812 414 aa15.89■□□□□ 0.13
GARNL3-210ENST00000453030 HMOX1P09601 288 aa15.88■□□□□ 0.13
GARNL3-210ENST00000453030 DPEP1P16444 411 aa15.88■□□□□ 0.13
GARNL3-210ENST00000453030 AKAP4Q5JQC9 854 aa15.88■□□□□ 0.13
GARNL3-210ENST00000453030 USP42Q9H9J4 1324 aaKnown RBP15.88■□□□□ 0.13
GARNL3-210ENST00000453030 KCPQ6ZWJ8 1503 aa15.88■□□□□ 0.13
GARNL3-210ENST00000453030 FCHSD2O94868 740 aa15.87■□□□□ 0.13
GARNL3-210ENST00000453030 FKBP8Q14318 412 aa15.86■□□□□ 0.13
GARNL3-210ENST00000453030 SLC52A2Q9HAB3 445 aa15.86■□□□□ 0.13
GARNL3-210ENST00000453030 SBF1O95248 1867 aa15.86■□□□□ 0.13
GARNL3-210ENST00000453030 DLEC1Q9Y238 1755 aa15.85■□□□□ 0.13
GARNL3-210ENST00000453030 DDR1Q08345 913 aa15.85■□□□□ 0.13
GARNL3-210ENST00000453030 SLC39A6Q13433 755 aa15.85■□□□□ 0.13
GARNL3-210ENST00000453030 CC2D1BQ5T0F9 858 aaKnown RBP15.85■□□□□ 0.13
GARNL3-210ENST00000453030 ARHGAP27Q6ZUM4 889 aa15.85■□□□□ 0.13
GARNL3-210ENST00000453030 DNAJC10Q8IXB1 793 aa15.85■□□□□ 0.13
GARNL3-210ENST00000453030 LGR6Q9HBX8 967 aa15.85■□□□□ 0.13
GARNL3-210ENST00000453030 SIPA1L3O60292 1781 aaPredicted RBP15.85■□□□□ 0.13
GARNL3-210ENST00000453030 KIF3CO14782 793 aa15.84■□□□□ 0.13
GARNL3-210ENST00000453030 HSPA6P17066 643 aa15.84■□□□□ 0.13
GARNL3-210ENST00000453030 CNGB1Q14028 1251 aaPredicted RBP15.84■□□□□ 0.13
GARNL3-210ENST00000453030 INTS5Q6P9B9 1019 aaKnown RBP15.84■□□□□ 0.13
GARNL3-210ENST00000453030 NRXN2Q9P2S2 1712 aa15.83■□□□□ 0.13
GARNL3-210ENST00000453030 RNMTO43148 476 aaKnown RBP15.83■□□□□ 0.12
GARNL3-210ENST00000453030 SOS1Q07889 1333 aaPredicted RBP15.83■□□□□ 0.12
GARNL3-210ENST00000453030 COL3A1P02461 1466 aaPredicted RBP15.83■□□□□ 0.12
GARNL3-210ENST00000453030 CCDC88AQ3V6T2 1871 aa15.82■□□□□ 0.12
GARNL3-210ENST00000453030 KCNA3P22001 575 aa15.82■□□□□ 0.12
GARNL3-210ENST00000453030 MTHFSDQ2M296 383 aaKnown RBP15.82■□□□□ 0.12
GARNL3-210ENST00000453030 USPL1Q5W0Q7 1092 aa15.82■□□□□ 0.12
GARNL3-210ENST00000453030 COL15A1P39059 1388 aa15.82■□□□□ 0.12
GARNL3-210ENST00000453030 POLRMTO00411 1230 aaKnown RBP15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms