RNA–Protein interactions for RNA: ENST00000452111.5

CTNS-204, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3

Gene CTNS, Length 617 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-204ENST00000452111 ARXQ96QS3 562 aa24.13■■□□□ 1.45
CTNS-204ENST00000452111 MTHFSDQ2M296 383 aaKnown RBP24.12■■□□□ 1.45
CTNS-204ENST00000452111 RBM42Q9BTD8 480 aaKnown RBP24.12■■□□□ 1.45
CTNS-204ENST00000452111 FHDC1Q9C0D6 1143 aaPredicted RBP24.12■■□□□ 1.45
CTNS-204ENST00000452111 C4BP0C0L5 1744 aa24.12■■□□□ 1.45
CTNS-204ENST00000452111 POLD1P28340 1107 aa24.11■■□□□ 1.45
CTNS-204ENST00000452111 NFATC2IPQ8NCF5 419 aa24.11■■□□□ 1.45
CTNS-204ENST00000452111 PHF14O94880 888 aa24.1■■□□□ 1.45
CTNS-204ENST00000452111 SMIM5Q71RC9 77 aa24.1■■□□□ 1.45
CTNS-204ENST00000452111 AMIGO3Q86WK7 504 aa24.1■■□□□ 1.45
CTNS-204ENST00000452111 TAF1LQ8IZX4 1826 aa24.1■■□□□ 1.45
CTNS-204ENST00000452111 MSL1Q68DK7 614 aa24.09■■□□□ 1.45
CTNS-204ENST00000452111 FLAD1Q8NFF5 587 aa24.09■■□□□ 1.45
CTNS-204ENST00000452111 LGR6Q9HBX8 967 aa24.09■■□□□ 1.45
CTNS-204ENST00000452111 SLC4A9Q96Q91 983 aa24.08■■□□□ 1.45
CTNS-204ENST00000452111 SYT17Q9BSW7 474 aa24.08■■□□□ 1.45
CTNS-204ENST00000452111 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.06■■□□□ 1.44
CTNS-204ENST00000452111 GNPATO15228 680 aa24.06■■□□□ 1.44
CTNS-204ENST00000452111 RNMTO43148 476 aaKnown RBP24.06■■□□□ 1.44
CTNS-204ENST00000452111 PTCD1O75127 700 aaKnown RBP24.06■■□□□ 1.44
CTNS-204ENST00000452111 KLHL34Q8N239 644 aa24.06■■□□□ 1.44
CTNS-204ENST00000452111 SLC52A2Q9HAB3 445 aa24.06■■□□□ 1.44
CTNS-204ENST00000452111 NUDCQ9Y266 331 aa24.06■■□□□ 1.44
CTNS-204ENST00000452111 SSFA2P28290 1259 aa24.04■■□□□ 1.44
CTNS-204ENST00000452111 DCAF8L1A6NGE4 600 aa24.03■■□□□ 1.44
CTNS-204ENST00000452111 U2AF1L5P0DN76 240 aaPredicted RBP24.03■■□□□ 1.44
CTNS-204ENST00000452111 PRKAR2BP31323 418 aa24.03■■□□□ 1.44
CTNS-204ENST00000452111 U2AF1Q01081 240 aaKnown RBP eCLIP24.03■■□□□ 1.44
CTNS-204ENST00000452111 GAS2L2Q8NHY3 880 aa24.03■■□□□ 1.44
CTNS-204ENST00000452111 SCN11AQ9UI33 1791 aa24.02■■□□□ 1.44
CTNS-204ENST00000452111 RSPH6AQ9H0K4 717 aa24.02■■□□□ 1.44
CTNS-204ENST00000452111 MRC1P22897 1456 aa24.01■■□□□ 1.43
CTNS-204ENST00000452111 MAP3K5Q99683 1374 aa24.01■■□□□ 1.43
CTNS-204ENST00000452111 DDX10Q13206 875 aaKnown RBP24■■□□□ 1.43
CTNS-204ENST00000452111 PHACTR3Q96KR7 559 aa24■■□□□ 1.43
CTNS-204ENST00000452111 UBR3Q6ZT12 1888 aa24■■□□□ 1.43
CTNS-204ENST00000452111 COL24A1Q17RW2 1714 aa23.99■■□□□ 1.43
CTNS-204ENST00000452111 SLC39A6Q13433 755 aa23.99■■□□□ 1.43
CTNS-204ENST00000452111 RTCBQ9Y3I0 505 aaKnown RBP23.99■■□□□ 1.43
CTNS-204ENST00000452111 GNAT3A8MTJ3 354 aa23.98■■□□□ 1.43
CTNS-204ENST00000452111 CNTNAP4Q9C0A0 1308 aa23.98■■□□□ 1.43
CTNS-204ENST00000452111 RC3H1Q5TC82 1133 aaKnown RBP23.97■■□□□ 1.43
CTNS-204ENST00000452111 ZNF831Q5JPB2 1677 aa23.96■■□□□ 1.43
CTNS-204ENST00000452111 IL17REQ8NFR9 667 aa23.96■■□□□ 1.43
CTNS-204ENST00000452111 ADAMTS7Q9UKP4 1686 aa23.95■■□□□ 1.43
CTNS-204ENST00000452111 TRAPPC3LQ5T215 181 aa23.95■■□□□ 1.42
CTNS-204ENST00000452111 UTRNP46939 3433 aa23.94■■□□□ 1.42
CTNS-204ENST00000452111 FCHSD2O94868 740 aa23.94■■□□□ 1.42
CTNS-204ENST00000452111 CRKLP46109 303 aaKnown RBP23.94■■□□□ 1.42
CTNS-204ENST00000452111 TEFQ10587 303 aa23.94■■□□□ 1.42
CTNS-204ENST00000452111 COL5A3P25940 1745 aaPredicted RBP23.93■■□□□ 1.42
CTNS-204ENST00000452111 RPS6KA4O75676 772 aa23.93■■□□□ 1.42
CTNS-204ENST00000452111 DNAJC10Q8IXB1 793 aa23.93■■□□□ 1.42
CTNS-204ENST00000452111 NLGN2Q8NFZ4 835 aa23.93■■□□□ 1.42
CTNS-204ENST00000452111 ARHGEF1Q92888 912 aaKnown RBP23.92■■□□□ 1.42
CTNS-204ENST00000452111 KCPQ6ZWJ8 1503 aa23.91■■□□□ 1.42
CTNS-204ENST00000452111 ADRA2BP18089 450 aa23.91■■□□□ 1.42
CTNS-204ENST00000452111 RALBP1Q15311 655 aa23.91■■□□□ 1.42
CTNS-204ENST00000452111 TJP1Q07157 1748 aa23.9■■□□□ 1.42
CTNS-204ENST00000452111 TTC5Q8N0Z6 440 aa23.9■■□□□ 1.42
CTNS-204ENST00000452111 RFC4P35249 363 aa23.89■■□□□ 1.41
CTNS-204ENST00000452111 CEMIPQ8WUJ3 1361 aa23.89■■□□□ 1.41
CTNS-204ENST00000452111 INTS5Q6P9B9 1019 aaKnown RBP23.88■■□□□ 1.41
CTNS-204ENST00000452111 PELP1Q8IZL8 1130 aaKnown RBP23.88■■□□□ 1.41
CTNS-204ENST00000452111 RTF1Q92541 710 aaKnown RBP23.88■■□□□ 1.41
CTNS-204ENST00000452111 VIRMAQ69YN4 1812 aaKnown RBP23.88■■□□□ 1.41
CTNS-204ENST00000452111 YY1P25490 414 aa23.87■■□□□ 1.41
CTNS-204ENST00000452111 GPR162Q16538 588 aa23.87■■□□□ 1.41
CTNS-204ENST00000452111 CCDC87Q9NVE4 849 aa23.87■■□□□ 1.41
CTNS-204ENST00000452111 CICQ96RK0 1608 aaPredicted RBP23.87■■□□□ 1.41
CTNS-204ENST00000452111 MYH14Q7Z406 1995 aaKnown RBP23.86■■□□□ 1.41
CTNS-204ENST00000452111 MMP10P09238 476 aa23.86■■□□□ 1.41
CTNS-204ENST00000452111 CYP19A1P11511 503 aaPredicted RBP23.86■■□□□ 1.41
CTNS-204ENST00000452111 ZNF790Q6PG37 636 aa23.86■■□□□ 1.41
CTNS-204ENST00000452111 MCM10Q7L590 875 aa23.86■■□□□ 1.41
CTNS-204ENST00000452111 CD2APQ9Y5K6 639 aa23.86■■□□□ 1.41
CTNS-204ENST00000452111 NEFMP07197 916 aa23.85■■□□□ 1.41
CTNS-204ENST00000452111 GYS1P13807 737 aa23.85■■□□□ 1.41
CTNS-204ENST00000452111 ZEB1P37275 1124 aaPredicted RBP23.85■■□□□ 1.41
CTNS-204ENST00000452111 VSIG10Q8N0Z9 540 aa23.85■■□□□ 1.41
CTNS-204ENST00000452111 ZNF496Q96IT1 587 aaPredicted RBP23.85■■□□□ 1.41
CTNS-204ENST00000452111 GOLGB1Q14789 3259 aaKnown RBP23.85■■□□□ 1.41
CTNS-204ENST00000452111 DCTN1Q14203 1278 aa23.84■■□□□ 1.41
CTNS-204ENST00000452111 NLGN1Q8N2Q7 840 aa23.84■■□□□ 1.41
CTNS-204ENST00000452111 SRP68Q9UHB9 627 aaKnown RBP23.84■■□□□ 1.41
CTNS-204ENST00000452111 BTBD11A6QL63 1104 aa23.83■■□□□ 1.41
CTNS-204ENST00000452111 ZBTB1Q9Y2K1 713 aa23.83■■□□□ 1.41
CTNS-204ENST00000452111 SOS1Q07889 1333 aaPredicted RBP23.82■■□□□ 1.4
CTNS-204ENST00000452111 MYBBP1AQ9BQG0 1328 aaKnown RBP23.82■■□□□ 1.4
CTNS-204ENST00000452111 USP42Q9H9J4 1324 aaKnown RBP23.82■■□□□ 1.4
CTNS-204ENST00000452111 HEG1Q9ULI3 1381 aa23.81■■□□□ 1.4
CTNS-204ENST00000452111 UBR2Q8IWV8 1755 aa23.81■■□□□ 1.4
CTNS-204ENST00000452111 KCNQ3O43525 872 aa23.81■■□□□ 1.4
CTNS-204ENST00000452111 PLEKHF1Q96S99 279 aa23.81■■□□□ 1.4
CTNS-204ENST00000452111 C4AP0C0L4 1744 aa23.8■■□□□ 1.4
CTNS-204ENST00000452111 FMNL2Q96PY5 1086 aa23.8■■□□□ 1.4
CTNS-204ENST00000452111 SIPA1L3O60292 1781 aaPredicted RBP23.79■■□□□ 1.4
CTNS-204ENST00000452111 HTATSF1O43719 755 aaKnown RBP23.79■■□□□ 1.4
CTNS-204ENST00000452111 STARD3NLO95772 234 aa23.79■■□□□ 1.4
CTNS-204ENST00000452111 CANXP27824 592 aaKnown RBP23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms