RNA–Protein interactions for RNA: ENST00000451903.2

CPS1-204, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 1 (best) BASIC

Gene CPS1, Length 4,770 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-204ENST00000451903 BHMTQ93088 406 aa7.47□□□□□ -1.21
CPS1-204ENST00000451903 CCDC85AQ96PX6 553 aaPredicted RBP7.47□□□□□ -1.21
CPS1-204ENST00000451903 UNC45AQ9H3U1 944 aa7.47□□□□□ -1.21
CPS1-204ENST00000451903 SEPT10Q9P0V9 454 aa7.47□□□□□ -1.21
CPS1-204ENST00000451903 ODF2LQ9ULJ1 636 aa7.47□□□□□ -1.21
CPS1-204ENST00000451903 MYO1CO00159 1063 aa7.47□□□□□ -1.21
CPS1-204ENST00000451903 RNF8O76064 485 aa7.47□□□□□ -1.21
CPS1-204ENST00000451903 SART3Q15020 963 aaKnown RBP7.47□□□□□ -1.21
CPS1-204ENST00000451903 RNF187Q5TA31 235 aaPredicted RBP7.47□□□□□ -1.21
CPS1-204ENST00000451903 CLASRPQ8N2M8 674 aaKnown RBP7.47□□□□□ -1.21
CPS1-204ENST00000451903 LUC7LQ9NQ29 371 aaKnown RBP7.47□□□□□ -1.21
CPS1-204ENST00000451903 CLIP2Q9UDT6 1046 aa7.47□□□□□ -1.21
CPS1-204ENST00000451903 ATP6V1DQ9Y5K8 247 aa7.47□□□□□ -1.21
CPS1-204ENST00000451903 MTA1Q13330 715 aa7.46□□□□□ -1.21
CPS1-204ENST00000451903 LMNTD2Q8IXW0 634 aa7.46□□□□□ -1.21
CPS1-204ENST00000451903 TBC1D22AQ8WUA7 517 aa7.46□□□□□ -1.21
CPS1-204ENST00000451903 N4BP2L2Q92802 583 aaPredicted RBP7.46□□□□□ -1.21
CPS1-204ENST00000451903 TSPAN18Q96SJ8 248 aa7.46□□□□□ -1.21
CPS1-204ENST00000451903 ATG3Q9NT62 314 aa7.46□□□□□ -1.21
CPS1-204ENST00000451903 POTEB2H3BUK9 544 aa7.46□□□□□ -1.22
CPS1-204ENST00000451903 PAX3P23760 479 aa7.46□□□□□ -1.22
CPS1-204ENST00000451903 MYLK4Q86YV6 388 aaPredicted RBP7.46□□□□□ -1.22
CPS1-204ENST00000451903 TEX11Q8IYF3 940 aa7.46□□□□□ -1.22
CPS1-204ENST00000451903 PPP1R12BO60237 982 aaPredicted RBP7.46□□□□□ -1.22
CPS1-204ENST00000451903 DYNC1I2Q13409 638 aaKnown RBP7.46□□□□□ -1.22
CPS1-204ENST00000451903 HHATQ5VTY9 493 aa7.46□□□□□ -1.22
CPS1-204ENST00000451903 CCAR1Q8IX12 1150 aaKnown RBP7.46□□□□□ -1.22
CPS1-204ENST00000451903 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.46□□□□□ -1.22
CPS1-204ENST00000451903 PPFIA2O75334 1257 aa7.46□□□□□ -1.22
CPS1-204ENST00000451903 DEUP1Q05D60 604 aa7.46□□□□□ -1.22
CPS1-204ENST00000451903 SMARCC1Q92922 1105 aaPredicted RBP7.46□□□□□ -1.22
CPS1-204ENST00000451903 ZNF692Q9BU19 519 aaPredicted RBP7.46□□□□□ -1.22
CPS1-204ENST00000451903 INPP5BP32019 993 aa7.45□□□□□ -1.22
CPS1-204ENST00000451903 RAD51AP2Q09MP3 1159 aa7.45□□□□□ -1.22
CPS1-204ENST00000451903 MICAL1Q8TDZ2 1067 aa7.45□□□□□ -1.22
CPS1-204ENST00000451903 EPSTI1Q96J88 318 aa7.45□□□□□ -1.22
CPS1-204ENST00000451903 PPP1R9BQ96SB3 815 aa7.45□□□□□ -1.22
CPS1-204ENST00000451903 TPP2P29144 1249 aaPredicted RBP7.45□□□□□ -1.22
CPS1-204ENST00000451903 SLC8A1P32418 973 aa7.45□□□□□ -1.22
CPS1-204ENST00000451903 PTPN14Q15678 1187 aa7.45□□□□□ -1.22
CPS1-204ENST00000451903 MCTP1Q6DN14 999 aa7.45□□□□□ -1.22
CPS1-204ENST00000451903 IQCA1Q86XH1 822 aa7.45□□□□□ -1.22
CPS1-204ENST00000451903 MAGEC2Q9UBF1 373 aaPredicted RBP7.45□□□□□ -1.22
CPS1-204ENST00000451903 SMTNL1A8MU46 457 aa7.45□□□□□ -1.22
CPS1-204ENST00000451903 KINO60870 393 aaKnown RBP7.45□□□□□ -1.22
CPS1-204ENST00000451903 PDE3BQ13370 1112 aa7.45□□□□□ -1.22
CPS1-204ENST00000451903 MAP7Q14244 749 aa7.45□□□□□ -1.22
CPS1-204ENST00000451903 TTC19Q6DKK2 380 aaPredicted RBP7.45□□□□□ -1.22
CPS1-204ENST00000451903 DAAM2Q86T65 1068 aa7.45□□□□□ -1.22
CPS1-204ENST00000451903 TRIM42Q8IWZ5 723 aa7.45□□□□□ -1.22
CPS1-204ENST00000451903 VCXQ9H320 206 aa7.45□□□□□ -1.22
CPS1-204ENST00000451903 SPINK5Q9NQ38 1064 aaPredicted RBP7.45□□□□□ -1.22
CPS1-204ENST00000451903 CGNL1Q0VF96 1302 aa7.45□□□□□ -1.22
CPS1-204ENST00000451903 LUC7L3O95232 432 aaKnown RBP7.44□□□□□ -1.22
CPS1-204ENST00000451903 MSL3P1P0C860 447 aa7.44□□□□□ -1.22
CPS1-204ENST00000451903 NMIQ13287 307 aaPredicted RBP7.44□□□□□ -1.22
CPS1-204ENST00000451903 TERF2Q15554 542 aa7.44□□□□□ -1.22
CPS1-204ENST00000451903 TEKT1Q969V4 418 aa7.44□□□□□ -1.22
CPS1-204ENST00000451903 A0A087WUV0 522 aaPredicted RBP7.44□□□□□ -1.22
CPS1-204ENST00000451903 ST18O60284 1047 aa7.44□□□□□ -1.22
CPS1-204ENST00000451903 XBP1P17861 261 aa7.44□□□□□ -1.22
CPS1-204ENST00000451903 PAX7P23759 505 aa7.44□□□□□ -1.22
CPS1-204ENST00000451903 EIF4G2P78344 907 aaKnown RBP eCLIP7.44□□□□□ -1.22
CPS1-204ENST00000451903 CCDC40Q4G0X9 1142 aa7.44□□□□□ -1.22
CPS1-204ENST00000451903 WDR75Q8IWA0 830 aaKnown RBP7.44□□□□□ -1.22
CPS1-204ENST00000451903 ZHX3Q9H4I2 956 aa7.44□□□□□ -1.22
CPS1-204ENST00000451903 GNL3LQ9NVN8 582 aaKnown RBP7.44□□□□□ -1.22
CPS1-204ENST00000451903 SNUPNO95149 360 aaKnown RBP7.44□□□□□ -1.22
CPS1-204ENST00000451903 GJA8P48165 433 aa7.44□□□□□ -1.22
CPS1-204ENST00000451903 HNRNPH2P55795 449 aaKnown RBP7.44□□□□□ -1.22
CPS1-204ENST00000451903 SFSWAPQ12872 951 aaKnown RBP7.44□□□□□ -1.22
CPS1-204ENST00000451903 MYBPC2Q14324 1141 aa7.44□□□□□ -1.22
CPS1-204ENST00000451903 TTC14Q96N46 770 aa7.44□□□□□ -1.22
CPS1-204ENST00000451903 VCX3BQ9H321 246 aa7.44□□□□□ -1.22
CPS1-204ENST00000451903 VCX3AQ9NNX9 186 aa7.44□□□□□ -1.22
CPS1-204ENST00000451903 C6orf203Q9P0P8 240 aaPredicted RBP7.44□□□□□ -1.22
CPS1-204ENST00000451903 TROVE2P10155 538 aaKnown RBP eCLIP7.44□□□□□ -1.22
CPS1-204ENST00000451903 LARP6Q9BRS8 491 aaKnown RBP7.44□□□□□ -1.22
CPS1-204ENST00000451903 LUC7L2Q9Y383 392 aaKnown RBP7.44□□□□□ -1.22
CPS1-204ENST00000451903 RIPOR2Q9Y4F9 1068 aa7.44□□□□□ -1.22
CPS1-204ENST00000451903 CTDP1Q9Y5B0 961 aaPredicted RBP7.44□□□□□ -1.22
CPS1-204ENST00000451903 SKILP12757 684 aa7.43□□□□□ -1.22
CPS1-204ENST00000451903 ARHGAP25P42331 645 aa7.43□□□□□ -1.22
CPS1-204ENST00000451903 RRP1P56182 461 aaKnown RBP7.43□□□□□ -1.22
CPS1-204ENST00000451903 NLRP5P59047 1200 aa7.43□□□□□ -1.22
CPS1-204ENST00000451903 FOXD4Q12950 439 aaPredicted RBP7.43□□□□□ -1.22
CPS1-204ENST00000451903 CCDC110Q8TBZ0 833 aa7.43□□□□□ -1.22
CPS1-204ENST00000451903 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.43□□□□□ -1.22
CPS1-204ENST00000451903 HOOK1Q9UJC3 728 aaKnown RBP7.43□□□□□ -1.22
CPS1-204ENST00000451903 MCM3P25205 808 aa7.43□□□□□ -1.22
CPS1-204ENST00000451903 KCNA1Q09470 495 aa7.43□□□□□ -1.22
CPS1-204ENST00000451903 B4GALNT4Q76KP1 1039 aa7.43□□□□□ -1.22
CPS1-204ENST00000451903 RPAP2Q8IXW5 612 aaPredicted RBP7.43□□□□□ -1.22
CPS1-204ENST00000451903 BICD1Q96G01 975 aa7.43□□□□□ -1.22
CPS1-204ENST00000451903 RWDD1Q9H446 243 aaPredicted RBP7.43□□□□□ -1.22
CPS1-204ENST00000451903 TBCAO75347 108 aaKnown RBP7.43□□□□□ -1.22
CPS1-204ENST00000451903 ARL10Q8N8L6 244 aa7.43□□□□□ -1.22
CPS1-204ENST00000451903 SCLT1Q96NL6 688 aa7.43□□□□□ -1.22
CPS1-204ENST00000451903 MKL2Q9ULH7 1088 aa7.43□□□□□ -1.22
CPS1-204ENST00000451903 PHLDB1Q86UU1 1377 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 101.3 ms