RNA–Protein interactions for RNA: ENST00000451716.5

COL27A1-202, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 2,865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-202ENST00000451716 NPHP4O75161 1426 aaPredicted RBP14.99□□□□□ -0.01
COL27A1-202ENST00000451716 CCDC30Q5VVM6 783 aa14.99□□□□□ -0.01
COL27A1-202ENST00000451716 LTN1O94822 1766 aa14.98□□□□□ -0.01
COL27A1-202ENST00000451716 GCP02774 474 aa14.98□□□□□ -0.01
COL27A1-202ENST00000451716 EIF2S2P20042 333 aaKnown RBP14.98□□□□□ -0.01
COL27A1-202ENST00000451716 KCNQ3O43525 872 aa14.97□□□□□ -0.01
COL27A1-202ENST00000451716 RBM25P49756 843 aaKnown RBP14.97□□□□□ -0.01
COL27A1-202ENST00000451716 CCT4P50991 539 aaKnown RBP14.97□□□□□ -0.01
COL27A1-202ENST00000451716 PROSER2Q86WR7 435 aaPredicted RBP14.97□□□□□ -0.01
COL27A1-202ENST00000451716 NAP1L5Q96NT1 182 aaPredicted RBP14.97□□□□□ -0.01
COL27A1-202ENST00000451716 PHAXQ9H814 394 aaKnown RBP14.97□□□□□ -0.01
COL27A1-202ENST00000451716 MPRIPQ6WCQ1 1025 aa14.97□□□□□ -0.01
COL27A1-202ENST00000451716 NFAT5O94916 1531 aa14.96□□□□□ -0.01
COL27A1-202ENST00000451716 GSE1Q14687 1217 aa14.96□□□□□ -0.01
COL27A1-202ENST00000451716 KCNH5Q8NCM2 988 aa14.96□□□□□ -0.01
COL27A1-202ENST00000451716 BBXQ8WY36 941 aaPredicted RBP14.96□□□□□ -0.01
COL27A1-202ENST00000451716 CHMP4AQ9BY43 222 aa14.96□□□□□ -0.01
COL27A1-202ENST00000451716 TTC22Q5TAA0 569 aa14.96□□□□□ -0.01
COL27A1-202ENST00000451716 HDGFL1Q5TGJ6 251 aa14.96□□□□□ -0.01
COL27A1-202ENST00000451716 RBM42Q9BTD8 480 aaKnown RBP14.96□□□□□ -0.01
COL27A1-202ENST00000451716 EXOC6BQ9Y2D4 811 aa14.96□□□□□ -0.01
COL27A1-202ENST00000451716 ZNF142P52746 1687 aaPredicted RBP14.96□□□□□ -0.01
COL27A1-202ENST00000451716 ADAMTSL3P82987 1691 aa14.95□□□□□ -0.02
COL27A1-202ENST00000451716 HSCBQ8IWL3 235 aa14.95□□□□□ -0.02
COL27A1-202ENST00000451716 CDC45O75419 566 aa14.95□□□□□ -0.02
COL27A1-202ENST00000451716 ZNF530Q6P9A1 599 aaPredicted RBP14.95□□□□□ -0.02
COL27A1-202ENST00000451716 FAM43AQ8N2R8 423 aa14.95□□□□□ -0.02
COL27A1-202ENST00000451716 KIF2CQ99661 725 aa14.95□□□□□ -0.02
COL27A1-202ENST00000451716 AXIN2Q9Y2T1 843 aa14.95□□□□□ -0.02
COL27A1-202ENST00000451716 GNAI2P04899 355 aa14.95□□□□□ -0.02
COL27A1-202ENST00000451716 DDX17Q92841 729 aaKnown RBP14.95□□□□□ -0.02
COL27A1-202ENST00000451716 LRRC37A3O60309 1634 aa14.94□□□□□ -0.02
COL27A1-202ENST00000451716 PNMA6EA0A0J9YXQ4 647 aa14.94□□□□□ -0.02
COL27A1-202ENST00000451716 ANXA1P04083 346 aa14.94□□□□□ -0.02
COL27A1-202ENST00000451716 TSHZ3Q63HK5 1081 aa14.94□□□□□ -0.02
COL27A1-202ENST00000451716 RGPD2P0DJD1 1756 aa14.94□□□□□ -0.02
COL27A1-202ENST00000451716 CD2BP2O95400 341 aaKnown RBP14.94□□□□□ -0.02
COL27A1-202ENST00000451716 ARHGEF25Q86VW2 580 aa14.94□□□□□ -0.02
COL27A1-202ENST00000451716 USP54Q70EL1 1684 aa14.93□□□□□ -0.02
COL27A1-202ENST00000451716 HMMRO75330 724 aa14.93□□□□□ -0.02
COL27A1-202ENST00000451716 KRT28Q7Z3Y7 464 aa14.93□□□□□ -0.02
COL27A1-202ENST00000451716 ZC3H6P61129 1189 aaKnown RBP14.93□□□□□ -0.02
COL27A1-202ENST00000451716 SDSP20132 328 aa14.92□□□□□ -0.02
COL27A1-202ENST00000451716 ANKRD24Q8TF21 1146 aa14.92□□□□□ -0.02
COL27A1-202ENST00000451716 CEMIPQ8WUJ3 1361 aa14.92□□□□□ -0.02
COL27A1-202ENST00000451716 EIF4A1P60842 406 aaKnown RBP14.92□□□□□ -0.02
COL27A1-202ENST00000451716 TEFQ10587 303 aa14.92□□□□□ -0.02
COL27A1-202ENST00000451716 FOXD4L1Q9NU39 408 aa14.92□□□□□ -0.02
COL27A1-202ENST00000451716 LRRFIP2Q9Y608 721 aaKnown RBP14.92□□□□□ -0.02
COL27A1-202ENST00000451716 CHPF2Q9P2E5 772 aa14.91□□□□□ -0.02
COL27A1-202ENST00000451716 BTBD11A6QL63 1104 aa14.91□□□□□ -0.02
COL27A1-202ENST00000451716 BRD2P25440 801 aaKnown RBP14.91□□□□□ -0.02
COL27A1-202ENST00000451716 USP44Q9H0E7 712 aa14.91□□□□□ -0.02
COL27A1-202ENST00000451716 FAM208AQ9UK61 1670 aaKnown RBP14.9□□□□□ -0.02
COL27A1-202ENST00000451716 GNAI3P08754 354 aa14.9□□□□□ -0.02
COL27A1-202ENST00000451716 PLEKHO1Q53GL0 409 aaPredicted RBP14.9□□□□□ -0.02
COL27A1-202ENST00000451716 AKAP4Q5JQC9 854 aa14.89□□□□□ -0.03
COL27A1-202ENST00000451716 BABAM1Q9NWV8 329 aa14.89□□□□□ -0.03
COL27A1-202ENST00000451716 PXDNQ92626 1479 aa14.89□□□□□ -0.03
COL27A1-202ENST00000451716 HSP90AA1P07900 732 aaKnown RBP14.89□□□□□ -0.03
COL27A1-202ENST00000451716 HSP90AB1P08238 724 aaKnown RBP14.89□□□□□ -0.03
COL27A1-202ENST00000451716 PRDM4Q9UKN5 801 aa14.89□□□□□ -0.03
COL27A1-202ENST00000451716 C1orf141Q5JVX7 400 aa14.88□□□□□ -0.03
COL27A1-202ENST00000451716 C19orf44Q9H6X5 657 aa14.88□□□□□ -0.03
COL27A1-202ENST00000451716 PRAMEF22A3QJZ6 481 aa14.88□□□□□ -0.03
COL27A1-202ENST00000451716 UBTFL1P0CB47 393 aaPredicted RBP14.88□□□□□ -0.03
COL27A1-202ENST00000451716 PDE1AP54750 535 aa14.88□□□□□ -0.03
COL27A1-202ENST00000451716 CHMP5Q9NZZ3 219 aa14.88□□□□□ -0.03
COL27A1-202ENST00000451716 PI4KAP2A4QPH2 592 aa14.87□□□□□ -0.03
COL27A1-202ENST00000451716 ATP8B2P98198 1209 aa14.87□□□□□ -0.03
COL27A1-202ENST00000451716 PI4KAP1Q8N8J0 262 aa14.87□□□□□ -0.03
COL27A1-202ENST00000451716 SNX21Q969T3 373 aa14.87□□□□□ -0.03
COL27A1-202ENST00000451716 RNMTO43148 476 aaKnown RBP14.87□□□□□ -0.03
COL27A1-202ENST00000451716 CABLES1Q8TDN4 633 aa14.87□□□□□ -0.03
COL27A1-202ENST00000451716 C1orf167Q5SNV9 1468 aa14.87□□□□□ -0.03
COL27A1-202ENST00000451716 LRRCC1Q9C099 1032 aa14.87□□□□□ -0.03
COL27A1-202ENST00000451716 GTF2E1P29083 439 aaPredicted RBP14.86□□□□□ -0.03
COL27A1-202ENST00000451716 NBPF7P0C2Y1 421 aaPredicted RBP14.86□□□□□ -0.03
COL27A1-202ENST00000451716 USP26Q9BXU7 913 aa14.86□□□□□ -0.03
COL27A1-202ENST00000451716 SRCIN1Q9C0H9 1055 aa14.86□□□□□ -0.03
COL27A1-202ENST00000451716 IL1RAPL2Q9NP60 686 aa14.86□□□□□ -0.03
COL27A1-202ENST00000451716 AMOTQ4VCS5 1084 aa14.85□□□□□ -0.03
COL27A1-202ENST00000451716 SOS1Q07889 1333 aaPredicted RBP14.85□□□□□ -0.03
COL27A1-202ENST00000451716 PROSER3Q2NL68 480 aa14.85□□□□□ -0.03
COL27A1-202ENST00000451716 ATF3P18847 181 aa14.84□□□□□ -0.03
COL27A1-202ENST00000451716 NLRP2Q9NX02 1062 aa14.84□□□□□ -0.03
COL27A1-202ENST00000451716 MCM4P33991 863 aa14.84□□□□□ -0.03
COL27A1-202ENST00000451716 PPP1R42Q7Z4L9 355 aa14.83□□□□□ -0.03
COL27A1-202ENST00000451716 DNAAF4Q8WXU2 420 aa14.83□□□□□ -0.03
COL27A1-202ENST00000451716 TMEM94Q12767 1356 aa14.83□□□□□ -0.03
COL27A1-202ENST00000451716 ERBB3P21860 1342 aa14.83□□□□□ -0.04
COL27A1-202ENST00000451716 SLIT3O75094 1523 aa14.83□□□□□ -0.04
COL27A1-202ENST00000451716 K7ELQ4 463 aaPredicted RBP14.83□□□□□ -0.04
COL27A1-202ENST00000451716 MX1P20591 662 aa14.83□□□□□ -0.04
COL27A1-202ENST00000451716 HSPA2P54652 639 aa14.83□□□□□ -0.04
COL27A1-202ENST00000451716 CHRNA2Q15822 529 aa14.83□□□□□ -0.04
COL27A1-202ENST00000451716 CASC1Q6TDU7 716 aa14.83□□□□□ -0.04
COL27A1-202ENST00000451716 IBTKQ9P2D0 1353 aaPredicted RBP14.82□□□□□ -0.04
COL27A1-202ENST00000451716 CACNA1FO60840 1977 aa14.82□□□□□ -0.04
COL27A1-202ENST00000451716 TULP1O00294 542 aaPredicted RBP14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms