RNA–Protein interactions for RNA: ENST00000451686.5

ITSN1-220, Transcript of intersectin 1, humanhuman

TSL 4

Gene ITSN1, Length 501 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-220ENST00000451686 SIK1P57059 783 aa29.45■■■□□ 2.31
ITSN1-220ENST00000451686 MTHFSDQ2M296 383 aaKnown RBP29.45■■■□□ 2.31
ITSN1-220ENST00000451686 CFAP53Q96M91 514 aa29.44■■■□□ 2.3
ITSN1-220ENST00000451686 DLG5Q8TDM6 1919 aa29.43■■■□□ 2.3
ITSN1-220ENST00000451686 U2SURPO15042 1029 aaKnown RBP29.42■■■□□ 2.3
ITSN1-220ENST00000451686 RSPH6AQ9H0K4 717 aa29.42■■■□□ 2.3
ITSN1-220ENST00000451686 SLC4A9Q96Q91 983 aa29.41■■■□□ 2.3
ITSN1-220ENST00000451686 HMGB2P26583 209 aaKnown RBP29.4■■■□□ 2.3
ITSN1-220ENST00000451686 ITPK1Q13572 414 aa29.4■■■□□ 2.3
ITSN1-220ENST00000451686 SLC16A10Q8TF71 515 aa29.4■■■□□ 2.3
ITSN1-220ENST00000451686 TFCP2L1Q9NZI6 479 aa29.4■■■□□ 2.3
ITSN1-220ENST00000451686 CABP4P57796 275 aa29.39■■■□□ 2.3
ITSN1-220ENST00000451686 LINC00116Q8NCU8 138 aa29.39■■■□□ 2.3
ITSN1-220ENST00000451686 C4AP0C0L4 1744 aa29.38■■■□□ 2.29
ITSN1-220ENST00000451686 ZEB1P37275 1124 aaPredicted RBP29.38■■■□□ 2.29
ITSN1-220ENST00000451686 AMIGO3Q86WK7 504 aa29.38■■■□□ 2.29
ITSN1-220ENST00000451686 LGR6Q9HBX8 967 aa29.38■■■□□ 2.29
ITSN1-220ENST00000451686 ATF5Q9Y2D1 282 aaPredicted RBP29.38■■■□□ 2.29
ITSN1-220ENST00000451686 KCPQ6ZWJ8 1503 aa29.38■■■□□ 2.29
ITSN1-220ENST00000451686 RNMTO43148 476 aaKnown RBP29.37■■■□□ 2.29
ITSN1-220ENST00000451686 DDX10Q13206 875 aaKnown RBP29.37■■■□□ 2.29
ITSN1-220ENST00000451686 NFATC2IPQ8NCF5 419 aa29.37■■■□□ 2.29
ITSN1-220ENST00000451686 COL23A1Q86Y22 540 aaPredicted RBP29.36■■■□□ 2.29
ITSN1-220ENST00000451686 MAP3K5Q99683 1374 aa29.36■■■□□ 2.29
ITSN1-220ENST00000451686 SLC52A2Q9HAB3 445 aa29.35■■■□□ 2.29
ITSN1-220ENST00000451686 NUDCQ9Y266 331 aa29.34■■■□□ 2.29
ITSN1-220ENST00000451686 PRKAR2BP31323 418 aa29.33■■■□□ 2.29
ITSN1-220ENST00000451686 GAS2L2Q8NHY3 880 aa29.33■■■□□ 2.29
ITSN1-220ENST00000451686 PHACTR3Q96KR7 559 aa29.33■■■□□ 2.29
ITSN1-220ENST00000451686 CEMIPQ8WUJ3 1361 aa29.32■■■□□ 2.28
ITSN1-220ENST00000451686 ATP6V1AP38606 617 aa29.32■■■□□ 2.28
ITSN1-220ENST00000451686 FCHSD2O94868 740 aa29.31■■■□□ 2.28
ITSN1-220ENST00000451686 RALBP1Q15311 655 aa29.31■■■□□ 2.28
ITSN1-220ENST00000451686 U2AF1L5P0DN76 240 aaPredicted RBP29.29■■■□□ 2.28
ITSN1-220ENST00000451686 U2AF1Q01081 240 aaKnown RBP eCLIP29.29■■■□□ 2.28
ITSN1-220ENST00000451686 FLAD1Q8NFF5 587 aa29.29■■■□□ 2.28
ITSN1-220ENST00000451686 PPP1R1BQ9UD71 204 aaPredicted RBP29.29■■■□□ 2.28
ITSN1-220ENST00000451686 CNTNAP4Q9C0A0 1308 aa29.28■■■□□ 2.28
ITSN1-220ENST00000451686 IL17REQ8NFR9 667 aa29.28■■■□□ 2.28
ITSN1-220ENST00000451686 AK7Q96M32 723 aa29.28■■■□□ 2.28
ITSN1-220ENST00000451686 GNAT3A8MTJ3 354 aa29.27■■■□□ 2.28
ITSN1-220ENST00000451686 SSFA2P28290 1259 aa29.27■■■□□ 2.28
ITSN1-220ENST00000451686 RC3H1Q5TC82 1133 aaKnown RBP29.25■■■□□ 2.27
ITSN1-220ENST00000451686 RBM42Q9BTD8 480 aaKnown RBP29.25■■■□□ 2.27
ITSN1-220ENST00000451686 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.24■■■□□ 2.27
ITSN1-220ENST00000451686 SMIM5Q71RC9 77 aa29.24■■■□□ 2.27
ITSN1-220ENST00000451686 ARXQ96QS3 562 aa29.24■■■□□ 2.27
ITSN1-220ENST00000451686 GNPATO15228 680 aa29.22■■■□□ 2.27
ITSN1-220ENST00000451686 PTCD1O75127 700 aaKnown RBP29.22■■■□□ 2.27
ITSN1-220ENST00000451686 MYBBP1AQ9BQG0 1328 aaKnown RBP29.21■■■□□ 2.27
ITSN1-220ENST00000451686 PLEKHF1Q96S99 279 aa29.21■■■□□ 2.27
ITSN1-220ENST00000451686 FHDC1Q9C0D6 1143 aaPredicted RBP29.21■■■□□ 2.27
ITSN1-220ENST00000451686 KIF13BQ9NQT8 1826 aa29.2■■■□□ 2.27
ITSN1-220ENST00000451686 SLC39A6Q13433 755 aa29.2■■■□□ 2.26
ITSN1-220ENST00000451686 KDM3BQ7LBC6 1761 aa29.2■■■□□ 2.26
ITSN1-220ENST00000451686 SYT17Q9BSW7 474 aa29.19■■■□□ 2.26
ITSN1-220ENST00000451686 PHF14O94880 888 aa29.17■■■□□ 2.26
ITSN1-220ENST00000451686 RPS6KA4O75676 772 aa29.16■■■□□ 2.26
ITSN1-220ENST00000451686 POLD1P28340 1107 aa29.16■■■□□ 2.26
ITSN1-220ENST00000451686 MSH5O43196 834 aa29.15■■■□□ 2.26
ITSN1-220ENST00000451686 ADRA2BP18089 450 aa29.15■■■□□ 2.26
ITSN1-220ENST00000451686 CRKLP46109 303 aaKnown RBP29.15■■■□□ 2.26
ITSN1-220ENST00000451686 VSIG10Q8N0Z9 540 aa29.15■■■□□ 2.26
ITSN1-220ENST00000451686 PRKRIP1Q9H875 184 aaPredicted RBP29.15■■■□□ 2.26
ITSN1-220ENST00000451686 KIAA1551Q9HCM1 1747 aa29.14■■■□□ 2.26
ITSN1-220ENST00000451686 MSL1Q68DK7 614 aa29.14■■■□□ 2.26
ITSN1-220ENST00000451686 DNAJC10Q8IXB1 793 aa29.14■■■□□ 2.26
ITSN1-220ENST00000451686 RTCBQ9Y3I0 505 aaKnown RBP29.14■■■□□ 2.26
ITSN1-220ENST00000451686 HTATSF1O43719 755 aaKnown RBP29.13■■■□□ 2.25
ITSN1-220ENST00000451686 TEFQ10587 303 aa29.13■■■□□ 2.25
ITSN1-220ENST00000451686 INTS5Q6P9B9 1019 aaKnown RBP29.13■■■□□ 2.25
ITSN1-220ENST00000451686 LAMB4A4D0S4 1761 aa29.12■■■□□ 2.25
ITSN1-220ENST00000451686 CHD4Q14839 1912 aa29.12■■■□□ 2.25
ITSN1-220ENST00000451686 CYP19A1P11511 503 aaPredicted RBP29.11■■■□□ 2.25
ITSN1-220ENST00000451686 ZNF790Q6PG37 636 aa29.11■■■□□ 2.25
ITSN1-220ENST00000451686 HEG1Q9ULI3 1381 aa29.11■■■□□ 2.25
ITSN1-220ENST00000451686 ARHGEF1Q92888 912 aaKnown RBP29.1■■■□□ 2.25
ITSN1-220ENST00000451686 ZNF496Q96IT1 587 aaPredicted RBP29.09■■■□□ 2.25
ITSN1-220ENST00000451686 TRAPPC3LQ5T215 181 aa29.08■■■□□ 2.25
ITSN1-220ENST00000451686 MCM10Q7L590 875 aa29.08■■■□□ 2.25
ITSN1-220ENST00000451686 SCN7AQ01118 1682 aa29.07■■■□□ 2.24
ITSN1-220ENST00000451686 SOS1Q07889 1333 aaPredicted RBP29.07■■■□□ 2.24
ITSN1-220ENST00000451686 CCDC87Q9NVE4 849 aa29.07■■■□□ 2.24
ITSN1-220ENST00000451686 UTRNP46939 3433 aa29.06■■■□□ 2.24
ITSN1-220ENST00000451686 DCTN1Q14203 1278 aa29.06■■■□□ 2.24
ITSN1-220ENST00000451686 NFE2L2Q16236 605 aa29.06■■■□□ 2.24
ITSN1-220ENST00000451686 KCNQ3O43525 872 aa29.05■■■□□ 2.24
ITSN1-220ENST00000451686 TTC5Q8N0Z6 440 aa29.05■■■□□ 2.24
ITSN1-220ENST00000451686 BRCA1P38398 1863 aaKnown RBP29.05■■■□□ 2.24
ITSN1-220ENST00000451686 AFDNP55196 1824 aaKnown RBP29.05■■■□□ 2.24
ITSN1-220ENST00000451686 GOLGB1Q14789 3259 aaKnown RBP29.05■■■□□ 2.24
ITSN1-220ENST00000451686 BCORQ6W2J9 1755 aa29.04■■■□□ 2.24
ITSN1-220ENST00000451686 GYS1P13807 737 aa29.04■■■□□ 2.24
ITSN1-220ENST00000451686 RTF1Q92541 710 aaKnown RBP29.04■■■□□ 2.24
ITSN1-220ENST00000451686 NRXN2Q9P2S2 1712 aa29.03■■■□□ 2.24
ITSN1-220ENST00000451686 USP42Q9H9J4 1324 aaKnown RBP29.03■■■□□ 2.24
ITSN1-220ENST00000451686 PNNQ9H307 717 aaKnown RBP29.03■■■□□ 2.24
ITSN1-220ENST00000451686 ZBTB1Q9Y2K1 713 aa29.03■■■□□ 2.24
ITSN1-220ENST00000451686 BTBD11A6QL63 1104 aa29.02■■■□□ 2.24
ITSN1-220ENST00000451686 NLGN2Q8NFZ4 835 aa29.02■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms