RNA–Protein interactions for RNA: ENST00000451285.1

LINC02543-201, Transcript of long intergenic non-protein coding RNA 2543, humanhuman

TSL 1 (best) BASIC

Gene LINC02543, Length 845 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02543-201ENST00000451285 KDRP35968 1356 aa12.61□□□□□ -0.39
LINC02543-201ENST00000451285 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.61□□□□□ -0.39
LINC02543-201ENST00000451285 MORC1Q86VD1 984 aa12.61□□□□□ -0.39
LINC02543-201ENST00000451285 COL5A3P25940 1745 aaPredicted RBP12.61□□□□□ -0.39
LINC02543-201ENST00000451285 VIRMAQ69YN4 1812 aaKnown RBP12.6□□□□□ -0.39
LINC02543-201ENST00000451285 SSFA2P28290 1259 aa12.6□□□□□ -0.39
LINC02543-201ENST00000451285 ATP6V1AP38606 617 aa12.6□□□□□ -0.39
LINC02543-201ENST00000451285 KLHL34Q8N239 644 aa12.6□□□□□ -0.39
LINC02543-201ENST00000451285 CD2APQ9Y5K6 639 aa12.6□□□□□ -0.39
LINC02543-201ENST00000451285 SCN11AQ9UI33 1791 aa12.6□□□□□ -0.39
LINC02543-201ENST00000451285 HMGB2P26583 209 aaKnown RBP12.59□□□□□ -0.39
LINC02543-201ENST00000451285 PLEKHO1Q53GL0 409 aaPredicted RBP12.59□□□□□ -0.39
LINC02543-201ENST00000451285 DCAF5Q96JK2 942 aa12.59□□□□□ -0.39
LINC02543-201ENST00000451285 AK7Q96M32 723 aa12.59□□□□□ -0.39
LINC02543-201ENST00000451285 KIF13BQ9NQT8 1826 aa12.58□□□□□ -0.4
LINC02543-201ENST00000451285 PHF14O94880 888 aa12.58□□□□□ -0.4
LINC02543-201ENST00000451285 AMOTQ4VCS5 1084 aa12.58□□□□□ -0.4
LINC02543-201ENST00000451285 RC3H1Q5TC82 1133 aaKnown RBP12.58□□□□□ -0.4
LINC02543-201ENST00000451285 SULT6B1Q6IMI4 303 aa12.58□□□□□ -0.4
LINC02543-201ENST00000451285 KIAA1551Q9HCM1 1747 aa12.58□□□□□ -0.4
LINC02543-201ENST00000451285 KNSTRNQ9Y448 316 aa12.58□□□□□ -0.4
LINC02543-201ENST00000451285 MTHFSP49914 203 aa12.57□□□□□ -0.4
LINC02543-201ENST00000451285 ZNF530Q6P9A1 599 aaPredicted RBP12.57□□□□□ -0.4
LINC02543-201ENST00000451285 NFATC2IPQ8NCF5 419 aa12.57□□□□□ -0.4
LINC02543-201ENST00000451285 GNPATO15228 680 aa12.56□□□□□ -0.4
LINC02543-201ENST00000451285 HSP90AB1P08238 724 aaKnown RBP12.56□□□□□ -0.4
LINC02543-201ENST00000451285 ARHGEF1Q92888 912 aaKnown RBP12.56□□□□□ -0.4
LINC02543-201ENST00000451285 ADAMTS7Q9UKP4 1686 aa12.55□□□□□ -0.4
LINC02543-201ENST00000451285 TJP1Q07157 1748 aa12.55□□□□□ -0.4
LINC02543-201ENST00000451285 GRIN3BO60391 1043 aa12.55□□□□□ -0.4
LINC02543-201ENST00000451285 PELP1Q8IZL8 1130 aaKnown RBP12.55□□□□□ -0.4
LINC02543-201ENST00000451285 LGR6Q9HBX8 967 aa12.55□□□□□ -0.4
LINC02543-201ENST00000451285 CICQ96RK0 1608 aaPredicted RBP12.55□□□□□ -0.4
LINC02543-201ENST00000451285 C4AP0C0L4 1744 aa12.54□□□□□ -0.4
LINC02543-201ENST00000451285 RPS6KA4O75676 772 aa12.54□□□□□ -0.4
LINC02543-201ENST00000451285 CABP4P57796 275 aa12.54□□□□□ -0.4
LINC02543-201ENST00000451285 RBM42Q9BTD8 480 aaKnown RBP12.54□□□□□ -0.4
LINC02543-201ENST00000451285 CNTNAP4Q9C0A0 1308 aa12.54□□□□□ -0.4
LINC02543-201ENST00000451285 N4BP2Q86UW6 1770 aaPredicted RBP12.53□□□□□ -0.4
LINC02543-201ENST00000451285 GYS1P13807 737 aa12.53□□□□□ -0.4
LINC02543-201ENST00000451285 TRAPPC3LQ5T215 181 aa12.53□□□□□ -0.4
LINC02543-201ENST00000451285 BRCA1P38398 1863 aaKnown RBP12.53□□□□□ -0.4
LINC02543-201ENST00000451285 C1QTNF8P60827 252 aa12.52□□□□□ -0.41
LINC02543-201ENST00000451285 AKAP4Q5JQC9 854 aa12.52□□□□□ -0.41
LINC02543-201ENST00000451285 INTS5Q6P9B9 1019 aaKnown RBP12.52□□□□□ -0.41
LINC02543-201ENST00000451285 RTCBQ9Y3I0 505 aaKnown RBP12.52□□□□□ -0.41
LINC02543-201ENST00000451285 PTCD1O75127 700 aaKnown RBP12.51□□□□□ -0.41
LINC02543-201ENST00000451285 MMP10P09238 476 aa12.51□□□□□ -0.41
LINC02543-201ENST00000451285 HMOX1P09601 288 aa12.51□□□□□ -0.41
LINC02543-201ENST00000451285 MTHFSDQ2M296 383 aaKnown RBP12.51□□□□□ -0.41
LINC02543-201ENST00000451285 NPC1L1Q9UHC9 1359 aa12.51□□□□□ -0.41
LINC02543-201ENST00000451285 COL3A1P02461 1466 aaPredicted RBP12.51□□□□□ -0.41
LINC02543-201ENST00000451285 RNMTO43148 476 aaKnown RBP12.5□□□□□ -0.41
LINC02543-201ENST00000451285 ADRA2BP18089 450 aa12.5□□□□□ -0.41
LINC02543-201ENST00000451285 KCNA3P22001 575 aa12.5□□□□□ -0.41
LINC02543-201ENST00000451285 CRKLP46109 303 aaKnown RBP12.5□□□□□ -0.41
LINC02543-201ENST00000451285 C1orf141Q5JVX7 400 aa12.5□□□□□ -0.41
LINC02543-201ENST00000451285 CC2D1BQ5T0F9 858 aaKnown RBP12.5□□□□□ -0.41
LINC02543-201ENST00000451285 NLGN1Q8N2Q7 840 aa12.5□□□□□ -0.41
LINC02543-201ENST00000451285 SLC52A2Q9HAB3 445 aa12.5□□□□□ -0.41
LINC02543-201ENST00000451285 ADCY9O60503 1353 aa12.5□□□□□ -0.41
LINC02543-201ENST00000451285 PXDNLA1KZ92 1463 aa12.49□□□□□ -0.41
LINC02543-201ENST00000451285 MRC1P22897 1456 aa12.49□□□□□ -0.41
LINC02543-201ENST00000451285 WWC3Q9ULE0 1092 aa12.49□□□□□ -0.41
LINC02543-201ENST00000451285 CEP350Q5VT06 3117 aa12.48□□□□□ -0.41
LINC02543-201ENST00000451285 DIAPH1O60610 1272 aaKnown RBP12.48□□□□□ -0.41
LINC02543-201ENST00000451285 TM4SF1P30408 202 aa12.48□□□□□ -0.41
LINC02543-201ENST00000451285 SLC39A6Q13433 755 aa12.48□□□□□ -0.41
LINC02543-201ENST00000451285 DNAJC10Q8IXB1 793 aa12.48□□□□□ -0.41
LINC02543-201ENST00000451285 SRP68Q9UHB9 627 aaKnown RBP12.48□□□□□ -0.41
LINC02543-201ENST00000451285 UBR2Q8IWV8 1755 aa12.48□□□□□ -0.41
LINC02543-201ENST00000451285 KCPQ6ZWJ8 1503 aa12.47□□□□□ -0.41
LINC02543-201ENST00000451285 C10orf71Q711Q0 1435 aa12.47□□□□□ -0.41
LINC02543-201ENST00000451285 A0A0G2JLW4 131 aa12.47□□□□□ -0.41
LINC02543-201ENST00000451285 CYP19A1P11511 503 aaPredicted RBP12.47□□□□□ -0.41
LINC02543-201ENST00000451285 TGFB2P61812 414 aa12.47□□□□□ -0.41
LINC02543-201ENST00000451285 FKBP8Q14318 412 aa12.47□□□□□ -0.41
LINC02543-201ENST00000451285 IL17REQ8NFR9 667 aa12.47□□□□□ -0.41
LINC02543-201ENST00000451285 SIPA1L3O60292 1781 aaPredicted RBP12.47□□□□□ -0.41
LINC02543-201ENST00000451285 ATP10DQ9P241 1426 aa12.46□□□□□ -0.41
LINC02543-201ENST00000451285 AFDNP55196 1824 aaKnown RBP12.46□□□□□ -0.41
LINC02543-201ENST00000451285 RFC4P35249 363 aa12.46□□□□□ -0.41
LINC02543-201ENST00000451285 DDR1Q08345 913 aa12.46□□□□□ -0.41
LINC02543-201ENST00000451285 USP42Q9H9J4 1324 aaKnown RBP12.45□□□□□ -0.42
LINC02543-201ENST00000451285 DPEP1P16444 411 aa12.45□□□□□ -0.42
LINC02543-201ENST00000451285 BCL2L12Q9HB09 334 aa12.45□□□□□ -0.42
LINC02543-201ENST00000451285 ARFGEF1Q9Y6D6 1849 aa12.45□□□□□ -0.42
LINC02543-201ENST00000451285 SOS1Q07889 1333 aaPredicted RBP12.44□□□□□ -0.42
LINC02543-201ENST00000451285 PHACTR3Q96KR7 559 aa12.44□□□□□ -0.42
LINC02543-201ENST00000451285 SBF1O95248 1867 aa12.44□□□□□ -0.42
LINC02543-201ENST00000451285 NRXN2Q9P2S2 1712 aa12.43□□□□□ -0.42
LINC02543-201ENST00000451285 POLRMTO00411 1230 aaKnown RBP12.43□□□□□ -0.42
LINC02543-201ENST00000451285 GIGYF1O75420 1035 aaPredicted RBP12.43□□□□□ -0.42
LINC02543-201ENST00000451285 VSIG10Q8N0Z9 540 aa12.43□□□□□ -0.42
LINC02543-201ENST00000451285 CCDC87Q9NVE4 849 aa12.43□□□□□ -0.42
LINC02543-201ENST00000451285 ZBTB1Q9Y2K1 713 aa12.42□□□□□ -0.42
LINC02543-201ENST00000451285 PARP3Q9Y6F1 533 aa12.42□□□□□ -0.42
LINC02543-201ENST00000451285 KIF3CO14782 793 aa12.41□□□□□ -0.42
LINC02543-201ENST00000451285 CNGB1Q14028 1251 aaPredicted RBP12.41□□□□□ -0.42
LINC02543-201ENST00000451285 USPL1Q5W0Q7 1092 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms