RNA–Protein interactions for RNA: ENST00000450882.1

MRPL28-206, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 3

Gene MRPL28, Length 619 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-206ENST00000450882 IL17REQ8NFR9 667 aa21.49■■□□□ 1.03
MRPL28-206ENST00000450882 ATG3Q9NT62 314 aa21.49■■□□□ 1.03
MRPL28-206ENST00000450882 ADAMTS7Q9UKP4 1686 aa21.48■■□□□ 1.03
MRPL28-206ENST00000450882 MRC1P22897 1456 aa21.48■■□□□ 1.03
MRPL28-206ENST00000450882 HTATSF1O43719 755 aaKnown RBP21.48■■□□□ 1.03
MRPL28-206ENST00000450882 KCNQ4P56696 695 aa21.48■■□□□ 1.03
MRPL28-206ENST00000450882 MCM10Q7L590 875 aa21.48■■□□□ 1.03
MRPL28-206ENST00000450882 STK32BQ9NY57 414 aa21.48■■□□□ 1.03
MRPL28-206ENST00000450882 LY75O60449 1722 aa21.48■■□□□ 1.03
MRPL28-206ENST00000450882 RBM42Q9BTD8 480 aaKnown RBP21.47■■□□□ 1.03
MRPL28-206ENST00000450882 LRRC4BQ9NT99 713 aa21.47■■□□□ 1.03
MRPL28-206ENST00000450882 PSDA5PKW4 1024 aaPredicted RBP21.46■■□□□ 1.03
MRPL28-206ENST00000450882 R3HDM1Q15032 1099 aaKnown RBP21.46■■□□□ 1.03
MRPL28-206ENST00000450882 LOC102724428A0A0B4J2F2 783 aa21.45■■□□□ 1.02
MRPL28-206ENST00000450882 HMGB2P26583 209 aaKnown RBP21.45■■□□□ 1.02
MRPL28-206ENST00000450882 SIK1P57059 783 aa21.45■■□□□ 1.02
MRPL28-206ENST00000450882 RIPK4P57078 832 aa21.45■■□□□ 1.02
MRPL28-206ENST00000450882 DCTN1Q14203 1278 aa21.45■■□□□ 1.02
MRPL28-206ENST00000450882 NEUROD2Q15784 382 aa21.45■■□□□ 1.02
MRPL28-206ENST00000450882 PNISRQ8TF01 805 aaKnown RBP21.45■■□□□ 1.02
MRPL28-206ENST00000450882 CEMIPQ8WUJ3 1361 aa21.45■■□□□ 1.02
MRPL28-206ENST00000450882 PTCD1O75127 700 aaKnown RBP21.44■■□□□ 1.02
MRPL28-206ENST00000450882 TMPOP42166 694 aaKnown RBP21.44■■□□□ 1.02
MRPL28-206ENST00000450882 LMOD3Q0VAK6 560 aa21.44■■□□□ 1.02
MRPL28-206ENST00000450882 ANO8Q9HCE9 1232 aaPredicted RBP21.44■■□□□ 1.02
MRPL28-206ENST00000450882 RRP7AQ9Y3A4 280 aaKnown RBP21.44■■□□□ 1.02
MRPL28-206ENST00000450882 DLG5Q8TDM6 1919 aa21.44■■□□□ 1.02
MRPL28-206ENST00000450882 ATP6V1AP38606 617 aa21.43■■□□□ 1.02
MRPL28-206ENST00000450882 TTC5Q8N0Z6 440 aa21.43■■□□□ 1.02
MRPL28-206ENST00000450882 SLC39A6Q13433 755 aa21.42■■□□□ 1.02
MRPL28-206ENST00000450882 SLC15A2Q16348 729 aa21.41■■□□□ 1.02
MRPL28-206ENST00000450882 FAM9BQ8IZU0 186 aa21.41■■□□□ 1.02
MRPL28-206ENST00000450882 BTBD11A6QL63 1104 aa21.4■■□□□ 1.02
MRPL28-206ENST00000450882 PAPPAQ13219 1627 aa21.4■■□□□ 1.02
MRPL28-206ENST00000450882 APAF1O14727 1248 aa21.39■■□□□ 1.01
MRPL28-206ENST00000450882 THUMPD2Q9BTF0 503 aaKnown RBP21.39■■□□□ 1.01
MRPL28-206ENST00000450882 C5P01031 1676 aa21.39■■□□□ 1.01
MRPL28-206ENST00000450882 TAF7Q15545 349 aaPredicted RBP21.38■■□□□ 1.01
MRPL28-206ENST00000450882 ZNF827Q17R98 1081 aa21.38■■□□□ 1.01
MRPL28-206ENST00000450882 TFCP2L1Q9NZI6 479 aa21.38■■□□□ 1.01
MRPL28-206ENST00000450882 SIPA1L3O60292 1781 aaPredicted RBP21.38■■□□□ 1.01
MRPL28-206ENST00000450882 ITPK1Q13572 414 aa21.37■■□□□ 1.01
MRPL28-206ENST00000450882 ZNF790Q6PG37 636 aa21.37■■□□□ 1.01
MRPL28-206ENST00000450882 AK7Q96M32 723 aa21.37■■□□□ 1.01
MRPL28-206ENST00000450882 CCER2I3L3R5 266 aa21.36■■□□□ 1.01
MRPL28-206ENST00000450882 LINC00116Q8NCU8 138 aa21.36■■□□□ 1.01
MRPL28-206ENST00000450882 AKT1S1Q96B36 256 aa21.36■■□□□ 1.01
MRPL28-206ENST00000450882 SLC4A9Q96Q91 983 aa21.36■■□□□ 1.01
MRPL28-206ENST00000450882 TAF1LQ8IZX4 1826 aa21.36■■□□□ 1.01
MRPL28-206ENST00000450882 FMNL2Q96PY5 1086 aa21.34■■□□□ 1.01
MRPL28-206ENST00000450882 KCPQ6ZWJ8 1503 aa21.34■■□□□ 1.01
MRPL28-206ENST00000450882 C4BP0C0L5 1744 aa21.33■■□□□ 1.01
MRPL28-206ENST00000450882 MIS18AQ9NYP9 233 aa21.33■■□□□ 1.01
MRPL28-206ENST00000450882 ZNF831Q5JPB2 1677 aa21.33■■□□□ 1
MRPL28-206ENST00000450882 ZNF496Q96IT1 587 aaPredicted RBP21.32■■□□□ 1
MRPL28-206ENST00000450882 TRIM35Q9UPQ4 493 aa21.32■■□□□ 1
MRPL28-206ENST00000450882 UBR2Q8IWV8 1755 aa21.31■■□□□ 1
MRPL28-206ENST00000450882 SENP3-EIF4A1A0A087X0R7 540 aa21.31■■□□□ 1
MRPL28-206ENST00000450882 GNPATO15228 680 aa21.31■■□□□ 1
MRPL28-206ENST00000450882 MSH5O43196 834 aa21.31■■□□□ 1
MRPL28-206ENST00000450882 KCNQ3O43525 872 aa21.31■■□□□ 1
MRPL28-206ENST00000450882 DNAJC10Q8IXB1 793 aa21.31■■□□□ 1
MRPL28-206ENST00000450882 VSIG10Q8N0Z9 540 aa21.31■■□□□ 1
MRPL28-206ENST00000450882 MIER1Q8N108 512 aa21.31■■□□□ 1
MRPL28-206ENST00000450882 TSPYL4Q9UJ04 414 aa21.3■■□□□ 1
MRPL28-206ENST00000450882 LAS1LQ9Y4W2 734 aaKnown RBP21.3■■□□□ 1
MRPL28-206ENST00000450882 HEG1Q9ULI3 1381 aa21.3■■□□□ 1
MRPL28-206ENST00000450882 PHF14O94880 888 aa21.29■■□□□ 1
MRPL28-206ENST00000450882 CALD1Q05682 793 aaKnown RBP21.29■■□□□ 1
MRPL28-206ENST00000450882 FLAD1Q8NFF5 587 aa21.29■■□□□ 1
MRPL28-206ENST00000450882 TJP1Q07157 1748 aa21.29■■□□□ 1
MRPL28-206ENST00000450882 PNPLA7Q6ZV29 1317 aa21.29■■□□□ 1
MRPL28-206ENST00000450882 CNTNAP4Q9C0A0 1308 aa21.29■■□□□ 1
MRPL28-206ENST00000450882 CRKLP46109 303 aaKnown RBP21.28■■□□□ 1
MRPL28-206ENST00000450882 RC3H1Q5TC82 1133 aaKnown RBP21.28■■□□□ 1
MRPL28-206ENST00000450882 TEX13AQ9BXU3 409 aaPredicted RBP21.28■■□□□ 1
MRPL28-206ENST00000450882 COL5A3P25940 1745 aaPredicted RBP21.27■■□□□ 1
MRPL28-206ENST00000450882 STARD3NLO95772 234 aa21.27■■□□□ 1
MRPL28-206ENST00000450882 PDGFDQ9GZP0 370 aaPredicted RBP21.27■■□□□ 1
MRPL28-206ENST00000450882 RTCBQ9Y3I0 505 aaKnown RBP21.27■■□□□ 1
MRPL28-206ENST00000450882 TUBGCP6Q96RT7 1819 aa21.27■□□□□ 0.99
MRPL28-206ENST00000450882 QSER1Q2KHR3 1735 aa21.26■□□□□ 0.99
MRPL28-206ENST00000450882 CICQ96RK0 1608 aaPredicted RBP21.26■□□□□ 0.99
MRPL28-206ENST00000450882 BABAM1Q9NWV8 329 aa21.26■□□□□ 0.99
MRPL28-206ENST00000450882 SALL2Q9Y467 1007 aaPredicted RBP21.26■□□□□ 0.99
MRPL28-206ENST00000450882 ZBTB7AO95365 584 aa21.25■□□□□ 0.99
MRPL28-206ENST00000450882 SNRPA1P09661 255 aaKnown RBP21.25■□□□□ 0.99
MRPL28-206ENST00000450882 CYP19A1P11511 503 aaPredicted RBP21.25■□□□□ 0.99
MRPL28-206ENST00000450882 SSFA2P28290 1259 aa21.25■□□□□ 0.99
MRPL28-206ENST00000450882 CCDC87Q9NVE4 849 aa21.25■□□□□ 0.99
MRPL28-206ENST00000450882 KDM3BQ7LBC6 1761 aa21.25■□□□□ 0.99
MRPL28-206ENST00000450882 CASZ1Q86V15 1759 aa21.25■□□□□ 0.99
MRPL28-206ENST00000450882 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.24■□□□□ 0.99
MRPL28-206ENST00000450882 COL23A1Q86Y22 540 aaPredicted RBP21.24■□□□□ 0.99
MRPL28-206ENST00000450882 UBR3Q6ZT12 1888 aa21.24■□□□□ 0.99
MRPL28-206ENST00000450882 RPS6KA4O75676 772 aa21.23■□□□□ 0.99
MRPL28-206ENST00000450882 EIF4A1P60842 406 aaKnown RBP21.23■□□□□ 0.99
MRPL28-206ENST00000450882 CCDC27Q2M243 656 aa21.23■□□□□ 0.99
MRPL28-206ENST00000450882 SMIM5Q71RC9 77 aa21.23■□□□□ 0.99
MRPL28-206ENST00000450882 SPON1Q9HCB6 807 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 146.9 ms