RNA–Protein interactions for RNA: ENST00000450584.5

LDHB-204, Transcript of lactate dehydrogenase B, human

TSL 3

Gene LDHB, Length 732 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LDHB-204	ENST00000450584	PDE4DIP	Q5VU43	2346 aa		13.08	□□□□□ -0.31
LDHB-204	ENST00000450584	MEGF6	O75095	1541 aa		13.08	□□□□□ -0.31
LDHB-204	ENST00000450584	ABHD8	Q96I13	439 aa		13.08	□□□□□ -0.32
LDHB-204	ENST00000450584	PRDM10	Q9NQV6	1147 aa		13.08	□□□□□ -0.32
LDHB-204	ENST00000450584	SBF1	O95248	1867 aa		13.08	□□□□□ -0.32
LDHB-204	ENST00000450584	PALLD	Q8WX93	1383 aa		13.07	□□□□□ -0.32
LDHB-204	ENST00000450584	DPEP1	P16444	411 aa		13.07	□□□□□ -0.32
LDHB-204	ENST00000450584	MKRN1	Q9UHC7	482 aa	Known RBP	13.07	□□□□□ -0.32
LDHB-204	ENST00000450584	FCHSD2	O94868	740 aa		13.06	□□□□□ -0.32
LDHB-204	ENST00000450584	MMP10	P09238	476 aa		13.06	□□□□□ -0.32
LDHB-204	ENST00000450584	RNF181	Q9P0P0	153 aa		13.06	□□□□□ -0.32
LDHB-204	ENST00000450584	RGPD2	P0DJD1	1756 aa		13.06	□□□□□ -0.32
LDHB-204	ENST00000450584	TTC21A	Q8NDW8	1320 aa		13.06	□□□□□ -0.32
LDHB-204	ENST00000450584	KCNA3	P22001	575 aa		13.05	□□□□□ -0.32
LDHB-204	ENST00000450584	CC2D1B	Q5T0F9	858 aa	Known RBP	13.05	□□□□□ -0.32
LDHB-204	ENST00000450584	FAM9B	Q8IZU0	186 aa		13.05	□□□□□ -0.32
LDHB-204	ENST00000450584	AK7	Q96M32	723 aa		13.05	□□□□□ -0.32
LDHB-204	ENST00000450584	TERF2IP	Q9NYB0	399 aa		13.05	□□□□□ -0.32
LDHB-204	ENST00000450584	MON2	Q7Z3U7	1717 aa		13.05	□□□□□ -0.32
LDHB-204	ENST00000450584	TGFB2	P61812	414 aa		13.04	□□□□□ -0.32
LDHB-204	ENST00000450584	MLLT1	Q03111	559 aa	Predicted RBP	13.04	□□□□□ -0.32
LDHB-204	ENST00000450584	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	13.04	□□□□□ -0.32
LDHB-204	ENST00000450584	USP31	Q70CQ4	1352 aa		13.04	□□□□□ -0.32
LDHB-204	ENST00000450584	MAP2	P11137	1827 aa	Known RBP	13.04	□□□□□ -0.32
LDHB-204	ENST00000450584	RGS19	P49795	217 aa		13.03	□□□□□ -0.32
LDHB-204	ENST00000450584	LBX1	P52954	281 aa		13.02	□□□□□ -0.33
LDHB-204	ENST00000450584	HNRNPU	Q00839	825 aa	Known RBP eCLIP	13.02	□□□□□ -0.33
LDHB-204	ENST00000450584	NME9	Q86XW9	330 aa		13.02	□□□□□ -0.33
LDHB-204	ENST00000450584	ZCRB1	Q8TBF4	217 aa	Known RBP	13.02	□□□□□ -0.33
LDHB-204	ENST00000450584	LTV1	Q96GA3	475 aa	Predicted RBP	13.02	□□□□□ -0.33
LDHB-204	ENST00000450584	DCAF5	Q96JK2	942 aa		13.02	□□□□□ -0.33
LDHB-204	ENST00000450584	SSFA2	P28290	1259 aa		13.01	□□□□□ -0.33
LDHB-204	ENST00000450584	HOXD11	P31277	338 aa	Predicted RBP	13.01	□□□□□ -0.33
LDHB-204	ENST00000450584	LINC00116	Q8NCU8	138 aa		13.01	□□□□□ -0.33
LDHB-204	ENST00000450584	CGNL1	Q0VF96	1302 aa		13.01	□□□□□ -0.33
LDHB-204	ENST00000450584	NSD3	Q9BZ95	1437 aa		13.01	□□□□□ -0.33
LDHB-204	ENST00000450584	C4A	P0C0L4	1744 aa		13.01	□□□□□ -0.33
LDHB-204	ENST00000450584	NPC1L1	Q9UHC9	1359 aa		13	□□□□□ -0.33
LDHB-204	ENST00000450584	POTEC	B2RU33	542 aa		13	□□□□□ -0.33
LDHB-204	ENST00000450584	CTCF	P49711	727 aa	Predicted RBP	13	□□□□□ -0.33
LDHB-204	ENST00000450584	ZNF692	Q9BU19	519 aa	Predicted RBP	13	□□□□□ -0.33
LDHB-204	ENST00000450584	ITGB4	P16144	1822 aa		12.99	□□□□□ -0.33
LDHB-204	ENST00000450584	KDM6A	O15550	1401 aa	Predicted RBP	12.99	□□□□□ -0.33
LDHB-204	ENST00000450584	CNTNAP1	P78357	1384 aa		12.99	□□□□□ -0.33
LDHB-204	ENST00000450584	PER1	O15534	1290 aa	Predicted RBP	12.99	□□□□□ -0.33
LDHB-204	ENST00000450584	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	12.99	□□□□□ -0.33
LDHB-204	ENST00000450584	CNKSR2	Q8WXI2	1034 aa		12.99	□□□□□ -0.33
LDHB-204	ENST00000450584	VIRMA	Q69YN4	1812 aa	Known RBP	12.99	□□□□□ -0.33
LDHB-204	ENST00000450584	VEGFA	P15692	232 aa	Predicted RBP	12.98	□□□□□ -0.33
LDHB-204	ENST00000450584	RASSF7	Q02833	373 aa		12.98	□□□□□ -0.33
LDHB-204	ENST00000450584	WDR43	Q15061	677 aa	Known RBP eCLIP	12.98	□□□□□ -0.33
LDHB-204	ENST00000450584	MPRIP	Q6WCQ1	1025 aa		12.98	□□□□□ -0.33
LDHB-204	ENST00000450584	CREBZF	Q9NS37	354 aa		12.98	□□□□□ -0.33
LDHB-204	ENST00000450584	TIAM2	Q8IVF5	1701 aa		12.97	□□□□□ -0.33
LDHB-204	ENST00000450584	CCDC85C	A6NKD9	419 aa		12.97	□□□□□ -0.33
LDHB-204	ENST00000450584	HSPA8	P11142	646 aa	Known RBP	12.97	□□□□□ -0.33
LDHB-204	ENST00000450584	MORC1	Q86VD1	984 aa		12.97	□□□□□ -0.33
LDHB-204	ENST00000450584	IP6K1	Q92551	441 aa		12.97	□□□□□ -0.33
LDHB-204	ENST00000450584	CD163L1	Q9NR16	1453 aa		12.97	□□□□□ -0.33
LDHB-204	ENST00000450584	GLTPD2	A6NH11	291 aa		12.96	□□□□□ -0.33
LDHB-204	ENST00000450584	GNPAT	O15228	680 aa		12.96	□□□□□ -0.33
LDHB-204	ENST00000450584	ITPK1	Q13572	414 aa		12.96	□□□□□ -0.33
LDHB-204	ENST00000450584	CFAP53	Q96M91	514 aa		12.96	□□□□□ -0.33
LDHB-204	ENST00000450584	SLC12A5	Q9H2X9	1139 aa		12.96	□□□□□ -0.33
LDHB-204	ENST00000450584	WBP1L	Q9NX94	342 aa		12.96	□□□□□ -0.33
LDHB-204	ENST00000450584	POTEI	P0CG38	1075 aa		12.95	□□□□□ -0.34
LDHB-204	ENST00000450584	POTEJ	P0CG39	1038 aa		12.95	□□□□□ -0.34
LDHB-204	ENST00000450584	VEGFB	P49765	207 aa		12.95	□□□□□ -0.34
LDHB-204	ENST00000450584	NEFL	P07196	543 aa		12.94	□□□□□ -0.34
LDHB-204	ENST00000450584	DALRD3	Q5D0E6	543 aa	Known RBP	12.94	□□□□□ -0.34
LDHB-204	ENST00000450584	AIDA	Q96BJ3	306 aa		12.94	□□□□□ -0.34
LDHB-204	ENST00000450584	CCDC87	Q9NVE4	849 aa		12.94	□□□□□ -0.34
LDHB-204	ENST00000450584	PIM2	Q9P1W9	311 aa		12.94	□□□□□ -0.34
LDHB-204	ENST00000450584	ZC3H4	Q9UPT8	1303 aa	Known RBP	12.93	□□□□□ -0.34
LDHB-204	ENST00000450584	CHRNA5	P30532	468 aa		12.93	□□□□□ -0.34
LDHB-204	ENST00000450584	AMER1	Q5JTC6	1135 aa	Predicted RBP	12.93	□□□□□ -0.34
LDHB-204	ENST00000450584	USHBP1	Q8N6Y0	703 aa		12.93	□□□□□ -0.34
LDHB-204	ENST00000450584	LOC102724428	A0A0B4J2F2	783 aa		12.92	□□□□□ -0.34
LDHB-204	ENST00000450584	SIK1	P57059	783 aa		12.92	□□□□□ -0.34
LDHB-204	ENST00000450584	CCDC88A	Q3V6T2	1871 aa		12.92	□□□□□ -0.34
LDHB-204	ENST00000450584	PIGB	Q92521	554 aa		12.92	□□□□□ -0.34
LDHB-204	ENST00000450584	CYP27B1	O15528	508 aa		12.91	□□□□□ -0.34
LDHB-204	ENST00000450584	GYS1	P13807	737 aa		12.91	□□□□□ -0.34
LDHB-204	ENST00000450584	FBLN1	P23142	703 aa		12.91	□□□□□ -0.34
LDHB-204	ENST00000450584	PPP2R1A	P30153	589 aa		12.91	□□□□□ -0.34
LDHB-204	ENST00000450584	HOXC9	P31274	260 aa		12.91	□□□□□ -0.34
LDHB-204	ENST00000450584	CACNB1	Q02641	598 aa	Predicted RBP	12.91	□□□□□ -0.34
LDHB-204	ENST00000450584	NBPF6	Q5VWK0	638 aa		12.91	□□□□□ -0.34
LDHB-204	ENST00000450584	NBPF4	Q96M43	638 aa		12.91	□□□□□ -0.34
LDHB-204	ENST00000450584	MAP3K19	Q56UN5	1328 aa		12.9	□□□□□ -0.34
LDHB-204	ENST00000450584	KIF20B	Q96Q89	1820 aa		12.9	□□□□□ -0.34
LDHB-204	ENST00000450584	NLGN1	Q8N2Q7	840 aa		12.9	□□□□□ -0.34
LDHB-204	ENST00000450584	SMARCC1	Q92922	1105 aa	Predicted RBP	12.9	□□□□□ -0.34
LDHB-204	ENST00000450584	ZBED9	Q6R2W3	1325 aa		12.89	□□□□□ -0.35
LDHB-204	ENST00000450584	PASK	Q96RG2	1323 aa		12.89	□□□□□ -0.35
LDHB-204	ENST00000450584	ANKRD26	Q9UPS8	1709 aa		12.89	□□□□□ -0.35
LDHB-204	ENST00000450584	HMGB2	P26583	209 aa	Known RBP	12.89	□□□□□ -0.35
LDHB-204	ENST00000450584	CHADL	Q6NUI6	762 aa		12.89	□□□□□ -0.35
LDHB-204	ENST00000450584	PNISR	Q8TF01	805 aa	Known RBP	12.89	□□□□□ -0.35
LDHB-204	ENST00000450584	RNF216	Q9NWF9	866 aa	Predicted RBP	12.89	□□□□□ -0.35

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