RNA–Protein interactions for RNA: ENST00000449704.5

TOP3B-211, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-211ENST00000449704 SIK1P57059 783 aa20.82■□□□□ 0.92
TOP3B-211ENST00000449704 NUP188Q5SRE5 1749 aa20.81■□□□□ 0.92
TOP3B-211ENST00000449704 TEFQ10587 303 aa20.81■□□□□ 0.92
TOP3B-211ENST00000449704 ADAMTS8Q9UP79 889 aa20.81■□□□□ 0.92
TOP3B-211ENST00000449704 ZNF827Q17R98 1081 aa20.8■□□□□ 0.92
TOP3B-211ENST00000449704 CCDC184Q52MB2 194 aa20.8■□□□□ 0.92
TOP3B-211ENST00000449704 CCDC146Q8IYE0 955 aa20.8■□□□□ 0.92
TOP3B-211ENST00000449704 PTCD1O75127 700 aaKnown RBP20.79■□□□□ 0.92
TOP3B-211ENST00000449704 ATP6V1AP38606 617 aa20.79■□□□□ 0.92
TOP3B-211ENST00000449704 NFE2L2Q16236 605 aa20.79■□□□□ 0.92
TOP3B-211ENST00000449704 MCM10Q7L590 875 aa20.79■□□□□ 0.92
TOP3B-211ENST00000449704 ITGB4P16144 1822 aa20.78■□□□□ 0.92
TOP3B-211ENST00000449704 SLC39A6Q13433 755 aa20.78■□□□□ 0.92
TOP3B-211ENST00000449704 DCTN1Q14203 1278 aa20.78■□□□□ 0.92
TOP3B-211ENST00000449704 AKT1S1Q96B36 256 aa20.78■□□□□ 0.92
TOP3B-211ENST00000449704 TFCP2L1Q9NZI6 479 aa20.78■□□□□ 0.92
TOP3B-211ENST00000449704 HMGB2P26583 209 aaKnown RBP20.77■□□□□ 0.92
TOP3B-211ENST00000449704 HTATSF1O43719 755 aaKnown RBP20.76■□□□□ 0.91
TOP3B-211ENST00000449704 ITPK1Q13572 414 aa20.76■□□□□ 0.91
TOP3B-211ENST00000449704 MRS2Q9HD23 443 aa20.76■□□□□ 0.91
TOP3B-211ENST00000449704 LRP5O75197 1615 aa20.75■□□□□ 0.91
TOP3B-211ENST00000449704 RUNDC1Q96C34 613 aa20.75■□□□□ 0.91
TOP3B-211ENST00000449704 SLC4A9Q96Q91 983 aa20.75■□□□□ 0.91
TOP3B-211ENST00000449704 PDGFDQ9GZP0 370 aaPredicted RBP20.75■□□□□ 0.91
TOP3B-211ENST00000449704 CEMIPQ8WUJ3 1361 aa20.74■□□□□ 0.91
TOP3B-211ENST00000449704 RIPK4P57078 832 aa20.74■□□□□ 0.91
TOP3B-211ENST00000449704 LINC00116Q8NCU8 138 aa20.74■□□□□ 0.91
TOP3B-211ENST00000449704 AK7Q96M32 723 aa20.74■□□□□ 0.91
TOP3B-211ENST00000449704 TMPOP42166 694 aaKnown RBP20.73■□□□□ 0.91
TOP3B-211ENST00000449704 NEUROD2Q15784 382 aa20.73■□□□□ 0.91
TOP3B-211ENST00000449704 TTC5Q8N0Z6 440 aa20.73■□□□□ 0.91
TOP3B-211ENST00000449704 RRP7AQ9Y3A4 280 aaKnown RBP20.73■□□□□ 0.91
TOP3B-211ENST00000449704 MRC1P22897 1456 aa20.73■□□□□ 0.91
TOP3B-211ENST00000449704 BTBD11A6QL63 1104 aa20.72■□□□□ 0.91
TOP3B-211ENST00000449704 LY75O60449 1722 aa20.72■□□□□ 0.91
TOP3B-211ENST00000449704 SCN11AQ9UI33 1791 aa20.72■□□□□ 0.91
TOP3B-211ENST00000449704 MSH5O43196 834 aa20.71■□□□□ 0.91
TOP3B-211ENST00000449704 THUMPD2Q9BTF0 503 aaKnown RBP20.71■□□□□ 0.91
TOP3B-211ENST00000449704 PAPPAQ13219 1627 aa20.71■□□□□ 0.91
TOP3B-211ENST00000449704 ZBTB7AO95365 584 aa20.7■□□□□ 0.9
TOP3B-211ENST00000449704 TAF7Q15545 349 aaPredicted RBP20.69■□□□□ 0.9
TOP3B-211ENST00000449704 ZNF790Q6PG37 636 aa20.69■□□□□ 0.9
TOP3B-211ENST00000449704 PNISRQ8TF01 805 aaKnown RBP20.69■□□□□ 0.9
TOP3B-211ENST00000449704 PNPLA7Q6ZV29 1317 aa20.69■□□□□ 0.9
TOP3B-211ENST00000449704 ADAMTS7Q9UKP4 1686 aa20.68■□□□□ 0.9
TOP3B-211ENST00000449704 GNPATO15228 680 aa20.68■□□□□ 0.9
TOP3B-211ENST00000449704 KCNQ3O43525 872 aa20.68■□□□□ 0.9
TOP3B-211ENST00000449704 LMOD3Q0VAK6 560 aa20.68■□□□□ 0.9
TOP3B-211ENST00000449704 SMIM5Q71RC9 77 aa20.68■□□□□ 0.9
TOP3B-211ENST00000449704 DNAJC10Q8IXB1 793 aa20.68■□□□□ 0.9
TOP3B-211ENST00000449704 ATF5Q9Y2D1 282 aaPredicted RBP20.68■□□□□ 0.9
TOP3B-211ENST00000449704 PHF14O94880 888 aa20.67■□□□□ 0.9
TOP3B-211ENST00000449704 ZNF496Q96IT1 587 aaPredicted RBP20.67■□□□□ 0.9
TOP3B-211ENST00000449704 SPON1Q9HCB6 807 aa20.67■□□□□ 0.9
TOP3B-211ENST00000449704 MIS18AQ9NYP9 233 aa20.67■□□□□ 0.9
TOP3B-211ENST00000449704 APAF1O14727 1248 aa20.66■□□□□ 0.9
TOP3B-211ENST00000449704 COL23A1Q86Y22 540 aaPredicted RBP20.66■□□□□ 0.9
TOP3B-211ENST00000449704 AMIGO3Q86WK7 504 aa20.65■□□□□ 0.9
TOP3B-211ENST00000449704 FLAD1Q8NFF5 587 aa20.65■□□□□ 0.9
TOP3B-211ENST00000449704 FMNL2Q96PY5 1086 aa20.65■□□□□ 0.9
TOP3B-211ENST00000449704 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.64■□□□□ 0.89
TOP3B-211ENST00000449704 CRKLP46109 303 aaKnown RBP20.64■□□□□ 0.89
TOP3B-211ENST00000449704 RC3H1Q5TC82 1133 aaKnown RBP20.64■□□□□ 0.89
TOP3B-211ENST00000449704 VSIG10Q8N0Z9 540 aa20.64■□□□□ 0.89
TOP3B-211ENST00000449704 MTFR1LQ9H019 292 aa20.64■□□□□ 0.89
TOP3B-211ENST00000449704 CNTNAP4Q9C0A0 1308 aa20.63■□□□□ 0.89
TOP3B-211ENST00000449704 RTCBQ9Y3I0 505 aaKnown RBP20.63■□□□□ 0.89
TOP3B-211ENST00000449704 C5P01031 1676 aa20.62■□□□□ 0.89
TOP3B-211ENST00000449704 SSFA2P28290 1259 aa20.62■□□□□ 0.89
TOP3B-211ENST00000449704 FAM9BQ8IZU0 186 aa20.62■□□□□ 0.89
TOP3B-211ENST00000449704 SLC16A10Q8TF71 515 aa20.62■□□□□ 0.89
TOP3B-211ENST00000449704 TRIM35Q9UPQ4 493 aa20.62■□□□□ 0.89
TOP3B-211ENST00000449704 KCPQ6ZWJ8 1503 aa20.62■□□□□ 0.89
TOP3B-211ENST00000449704 C4BP0C0L5 1744 aa20.61■□□□□ 0.89
TOP3B-211ENST00000449704 SENP3-EIF4A1A0A087X0R7 540 aa20.61■□□□□ 0.89
TOP3B-211ENST00000449704 CYP19A1P11511 503 aaPredicted RBP20.61■□□□□ 0.89
TOP3B-211ENST00000449704 CCDC87Q9NVE4 849 aa20.61■□□□□ 0.89
TOP3B-211ENST00000449704 HEG1Q9ULI3 1381 aa20.6■□□□□ 0.89
TOP3B-211ENST00000449704 RPS6KA4O75676 772 aa20.6■□□□□ 0.89
TOP3B-211ENST00000449704 STARD3NLO95772 234 aa20.6■□□□□ 0.89
TOP3B-211ENST00000449704 TRAPPC3LQ5T215 181 aa20.6■□□□□ 0.89
TOP3B-211ENST00000449704 DIEXFQ68CQ4 756 aaKnown RBP20.6■□□□□ 0.89
TOP3B-211ENST00000449704 INTS5Q6P9B9 1019 aaKnown RBP20.6■□□□□ 0.89
TOP3B-211ENST00000449704 TEX13AQ9BXU3 409 aaPredicted RBP20.6■□□□□ 0.89
TOP3B-211ENST00000449704 PPP1R1BQ9UD71 204 aaPredicted RBP20.6■□□□□ 0.89
TOP3B-211ENST00000449704 TSPYL4Q9UJ04 414 aa20.59■□□□□ 0.89
TOP3B-211ENST00000449704 LAS1LQ9Y4W2 734 aaKnown RBP20.59■□□□□ 0.89
TOP3B-211ENST00000449704 MSL1Q68DK7 614 aa20.58■□□□□ 0.89
TOP3B-211ENST00000449704 TAF1LQ8IZX4 1826 aa20.57■□□□□ 0.88
TOP3B-211ENST00000449704 CASZ1Q86V15 1759 aa20.57■□□□□ 0.88
TOP3B-211ENST00000449704 SNRPA1P09661 255 aaKnown RBP20.57■□□□□ 0.88
TOP3B-211ENST00000449704 PTGER2P43116 358 aa20.57■□□□□ 0.88
TOP3B-211ENST00000449704 ARHGEF1Q92888 912 aaKnown RBP20.57■□□□□ 0.88
TOP3B-211ENST00000449704 VIRMAQ69YN4 1812 aaKnown RBP20.57■□□□□ 0.88
TOP3B-211ENST00000449704 PRAMEF22A3QJZ6 481 aa20.56■□□□□ 0.88
TOP3B-211ENST00000449704 ADRA2BP18089 450 aa20.56■□□□□ 0.88
TOP3B-211ENST00000449704 CANXP27824 592 aaKnown RBP20.56■□□□□ 0.88
TOP3B-211ENST00000449704 POLD1P28340 1107 aa20.56■□□□□ 0.88
TOP3B-211ENST00000449704 ZBTB1Q9Y2K1 713 aa20.56■□□□□ 0.88
TOP3B-211ENST00000449704 ZNF831Q5JPB2 1677 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms