RNA–Protein interactions for RNA: ENST00000449530.2

LSP1P3-201, Transcript of LSP1 pseudogene 3, humanhuman

BASIC

Gene LSP1P3, Length 208 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P3-201ENST00000449530 UBR3Q6ZT12 1888 aa15.97■□□□□ 0.15
LSP1P3-201ENST00000449530 COL5A3P25940 1745 aaPredicted RBP15.97■□□□□ 0.15
LSP1P3-201ENST00000449530 U2AF1L5P0DN76 240 aaPredicted RBP15.97■□□□□ 0.15
LSP1P3-201ENST00000449530 PRKAR2BP31323 418 aa15.97■□□□□ 0.15
LSP1P3-201ENST00000449530 U2AF1Q01081 240 aaKnown RBP eCLIP15.97■□□□□ 0.15
LSP1P3-201ENST00000449530 RSPH6AQ9H0K4 717 aa15.97■□□□□ 0.15
LSP1P3-201ENST00000449530 ATG3Q9NT62 314 aa15.97■□□□□ 0.15
LSP1P3-201ENST00000449530 LOC102724428A0A0B4J2F2 783 aa15.96■□□□□ 0.15
LSP1P3-201ENST00000449530 SIK1P57059 783 aa15.96■□□□□ 0.15
LSP1P3-201ENST00000449530 C1QTNF8P60827 252 aa15.96■□□□□ 0.15
LSP1P3-201ENST00000449530 RALBP1Q15311 655 aa15.96■□□□□ 0.15
LSP1P3-201ENST00000449530 TFCP2L1Q9NZI6 479 aa15.96■□□□□ 0.15
LSP1P3-201ENST00000449530 MAP3K5Q99683 1374 aa15.96■□□□□ 0.15
LSP1P3-201ENST00000449530 TJP1Q07157 1748 aa15.96■□□□□ 0.15
LSP1P3-201ENST00000449530 PNPLA7Q6ZV29 1317 aa15.95■□□□□ 0.14
LSP1P3-201ENST00000449530 SIPA1L3O60292 1781 aaPredicted RBP15.95■□□□□ 0.14
LSP1P3-201ENST00000449530 CICQ96RK0 1608 aaPredicted RBP15.94■□□□□ 0.14
LSP1P3-201ENST00000449530 NFATC2IPQ8NCF5 419 aa15.94■□□□□ 0.14
LSP1P3-201ENST00000449530 GAS2L2Q8NHY3 880 aa15.94■□□□□ 0.14
LSP1P3-201ENST00000449530 UBR2Q8IWV8 1755 aa15.93■□□□□ 0.14
LSP1P3-201ENST00000449530 RNMTO43148 476 aaKnown RBP15.93■□□□□ 0.14
LSP1P3-201ENST00000449530 ITPK1Q13572 414 aa15.93■□□□□ 0.14
LSP1P3-201ENST00000449530 LINC00116Q8NCU8 138 aa15.93■□□□□ 0.14
LSP1P3-201ENST00000449530 PHACTR3Q96KR7 559 aa15.93■□□□□ 0.14
LSP1P3-201ENST00000449530 RBM42Q9BTD8 480 aaKnown RBP15.93■□□□□ 0.14
LSP1P3-201ENST00000449530 MTFR1LQ9H019 292 aa15.93■□□□□ 0.14
LSP1P3-201ENST00000449530 LGR6Q9HBX8 967 aa15.93■□□□□ 0.14
LSP1P3-201ENST00000449530 ATF5Q9Y2D1 282 aaPredicted RBP15.93■□□□□ 0.14
LSP1P3-201ENST00000449530 COL24A1Q17RW2 1714 aa15.93■□□□□ 0.14
LSP1P3-201ENST00000449530 MYBBP1AQ9BQG0 1328 aaKnown RBP15.93■□□□□ 0.14
LSP1P3-201ENST00000449530 DLG5Q8TDM6 1919 aa15.92■□□□□ 0.14
LSP1P3-201ENST00000449530 ATP6V1AP38606 617 aa15.92■□□□□ 0.14
LSP1P3-201ENST00000449530 AK7Q96M32 723 aa15.92■□□□□ 0.14
LSP1P3-201ENST00000449530 SLC52A2Q9HAB3 445 aa15.92■□□□□ 0.14
LSP1P3-201ENST00000449530 KCPQ6ZWJ8 1503 aa15.91■□□□□ 0.14
LSP1P3-201ENST00000449530 MSH5O43196 834 aa15.91■□□□□ 0.14
LSP1P3-201ENST00000449530 GNAT3A8MTJ3 354 aa15.9■□□□□ 0.14
LSP1P3-201ENST00000449530 PTCD1O75127 700 aaKnown RBP15.9■□□□□ 0.14
LSP1P3-201ENST00000449530 FCHSD2O94868 740 aa15.9■□□□□ 0.14
LSP1P3-201ENST00000449530 HMGB2P26583 209 aaKnown RBP15.9■□□□□ 0.14
LSP1P3-201ENST00000449530 SLC4A9Q96Q91 983 aa15.9■□□□□ 0.14
LSP1P3-201ENST00000449530 PHF14O94880 888 aa15.89■□□□□ 0.13
LSP1P3-201ENST00000449530 PTGER2P43116 358 aa15.89■□□□□ 0.13
LSP1P3-201ENST00000449530 C4AP0C0L4 1744 aa15.88■□□□□ 0.13
LSP1P3-201ENST00000449530 AMIGO3Q86WK7 504 aa15.88■□□□□ 0.13
LSP1P3-201ENST00000449530 COL23A1Q86Y22 540 aaPredicted RBP15.88■□□□□ 0.13
LSP1P3-201ENST00000449530 MYH14Q7Z406 1995 aaKnown RBP15.87■□□□□ 0.13
LSP1P3-201ENST00000449530 ZNF316A6NFI3 1004 aaPredicted RBP15.87■□□□□ 0.13
LSP1P3-201ENST00000449530 GNPATO15228 680 aa15.87■□□□□ 0.13
LSP1P3-201ENST00000449530 TEFQ10587 303 aa15.87■□□□□ 0.13
LSP1P3-201ENST00000449530 SLC39A6Q13433 755 aa15.87■□□□□ 0.13
LSP1P3-201ENST00000449530 SLC16A10Q8TF71 515 aa15.87■□□□□ 0.13
LSP1P3-201ENST00000449530 PRKRIP1Q9H875 184 aaPredicted RBP15.87■□□□□ 0.13
LSP1P3-201ENST00000449530 CEMIPQ8WUJ3 1361 aa15.87■□□□□ 0.13
LSP1P3-201ENST00000449530 NEFMP07197 916 aa15.86■□□□□ 0.13
LSP1P3-201ENST00000449530 SMIM5Q71RC9 77 aa15.86■□□□□ 0.13
LSP1P3-201ENST00000449530 IL17REQ8NFR9 667 aa15.86■□□□□ 0.13
LSP1P3-201ENST00000449530 SGIP1Q9BQI5 828 aa15.86■□□□□ 0.13
LSP1P3-201ENST00000449530 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.85■□□□□ 0.13
LSP1P3-201ENST00000449530 MSL1Q68DK7 614 aa15.85■□□□□ 0.13
LSP1P3-201ENST00000449530 FLAD1Q8NFF5 587 aa15.85■□□□□ 0.13
LSP1P3-201ENST00000449530 SYT17Q9BSW7 474 aa15.85■□□□□ 0.13
LSP1P3-201ENST00000449530 CNTNAP4Q9C0A0 1308 aa15.85■□□□□ 0.13
LSP1P3-201ENST00000449530 SSFA2P28290 1259 aa15.84■□□□□ 0.13
LSP1P3-201ENST00000449530 FHDC1Q9C0D6 1143 aaPredicted RBP15.84■□□□□ 0.13
LSP1P3-201ENST00000449530 MAPK8IP3Q9UPT6 1336 aa15.84■□□□□ 0.13
LSP1P3-201ENST00000449530 CEP350Q5VT06 3117 aa15.84■□□□□ 0.13
LSP1P3-201ENST00000449530 POLD1P28340 1107 aa15.83■□□□□ 0.12
LSP1P3-201ENST00000449530 MCM10Q7L590 875 aa15.83■□□□□ 0.12
LSP1P3-201ENST00000449530 TTC5Q8N0Z6 440 aa15.83■□□□□ 0.12
LSP1P3-201ENST00000449530 RTF1Q92541 710 aaKnown RBP15.83■□□□□ 0.12
LSP1P3-201ENST00000449530 CHD4Q14839 1912 aa15.82■□□□□ 0.12
LSP1P3-201ENST00000449530 DNAJC10Q8IXB1 793 aa15.82■□□□□ 0.12
LSP1P3-201ENST00000449530 ARXQ96QS3 562 aa15.82■□□□□ 0.12
LSP1P3-201ENST00000449530 PLEKHF1Q96S99 279 aa15.82■□□□□ 0.12
LSP1P3-201ENST00000449530 GIGYF1O75420 1035 aaPredicted RBP15.81■□□□□ 0.12
LSP1P3-201ENST00000449530 CRKLP46109 303 aaKnown RBP15.81■□□□□ 0.12
LSP1P3-201ENST00000449530 DCTN1Q14203 1278 aa15.81■□□□□ 0.12
LSP1P3-201ENST00000449530 WDR43Q15061 677 aaKnown RBP eCLIP15.81■□□□□ 0.12
LSP1P3-201ENST00000449530 KDM3BQ7LBC6 1761 aa15.81■□□□□ 0.12
LSP1P3-201ENST00000449530 RTCBQ9Y3I0 505 aaKnown RBP15.81■□□□□ 0.12
LSP1P3-201ENST00000449530 NFE2L2Q16236 605 aa15.8■□□□□ 0.12
LSP1P3-201ENST00000449530 RC3H1Q5TC82 1133 aaKnown RBP15.8■□□□□ 0.12
LSP1P3-201ENST00000449530 KLHL34Q8N239 644 aa15.8■□□□□ 0.12
LSP1P3-201ENST00000449530 PNNQ9H307 717 aaKnown RBP15.8■□□□□ 0.12
LSP1P3-201ENST00000449530 BTBD11A6QL63 1104 aa15.79■□□□□ 0.12
LSP1P3-201ENST00000449530 HTATSF1O43719 755 aaKnown RBP15.79■□□□□ 0.12
LSP1P3-201ENST00000449530 ZNF790Q6PG37 636 aa15.79■□□□□ 0.12
LSP1P3-201ENST00000449530 HEG1Q9ULI3 1381 aa15.78■□□□□ 0.12
LSP1P3-201ENST00000449530 LAMB4A4D0S4 1761 aa15.78■□□□□ 0.12
LSP1P3-201ENST00000449530 RPS6KA4O75676 772 aa15.78■□□□□ 0.12
LSP1P3-201ENST00000449530 CCDC146Q8IYE0 955 aa15.78■□□□□ 0.12
LSP1P3-201ENST00000449530 ZNF496Q96IT1 587 aaPredicted RBP15.78■□□□□ 0.12
LSP1P3-201ENST00000449530 CCDC87Q9NVE4 849 aa15.78■□□□□ 0.12
LSP1P3-201ENST00000449530 KCNQ3O43525 872 aa15.77■□□□□ 0.12
LSP1P3-201ENST00000449530 ADRA2BP18089 450 aa15.77■□□□□ 0.12
LSP1P3-201ENST00000449530 TRAPPC3LQ5T215 181 aa15.77■□□□□ 0.12
LSP1P3-201ENST00000449530 VSIG10Q8N0Z9 540 aa15.77■□□□□ 0.12
LSP1P3-201ENST00000449530 CYP19A1P11511 503 aaPredicted RBP15.76■□□□□ 0.11
LSP1P3-201ENST00000449530 GPR162Q16538 588 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms