RNA–Protein interactions for RNA: ENST00000449415.5

RFTN1-205, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 3

Gene RFTN1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-205ENST00000449415 PNPLA7Q6ZV29 1317 aa24.04■■□□□ 1.44
RFTN1-205ENST00000449415 RBM42Q9BTD8 480 aaKnown RBP24.03■■□□□ 1.44
RFTN1-205ENST00000449415 C4BP0C0L5 1744 aa24.03■■□□□ 1.44
RFTN1-205ENST00000449415 RNMTO43148 476 aaKnown RBP24.02■■□□□ 1.44
RFTN1-205ENST00000449415 ATP6V1AP38606 617 aa24.02■■□□□ 1.44
RFTN1-205ENST00000449415 RALBP1Q15311 655 aa24.02■■□□□ 1.44
RFTN1-205ENST00000449415 PHACTR3Q96KR7 559 aa24.02■■□□□ 1.44
RFTN1-205ENST00000449415 PPP1R1BQ9UD71 204 aaPredicted RBP24.02■■□□□ 1.44
RFTN1-205ENST00000449415 MSH5O43196 834 aa24.01■■□□□ 1.43
RFTN1-205ENST00000449415 ITPK1Q13572 414 aa24■■□□□ 1.43
RFTN1-205ENST00000449415 LINC00116Q8NCU8 138 aa24■■□□□ 1.43
RFTN1-205ENST00000449415 GAS2L2Q8NHY3 880 aa24■■□□□ 1.43
RFTN1-205ENST00000449415 MTFR1LQ9H019 292 aa24■■□□□ 1.43
RFTN1-205ENST00000449415 AK7Q96M32 723 aa23.99■■□□□ 1.43
RFTN1-205ENST00000449415 SLC52A2Q9HAB3 445 aa23.99■■□□□ 1.43
RFTN1-205ENST00000449415 ADAMTS7Q9UKP4 1686 aa23.99■■□□□ 1.43
RFTN1-205ENST00000449415 MAP3K5Q99683 1374 aa23.98■■□□□ 1.43
RFTN1-205ENST00000449415 PTCD1O75127 700 aaKnown RBP23.97■■□□□ 1.43
RFTN1-205ENST00000449415 FCHSD2O94868 740 aa23.97■■□□□ 1.43
RFTN1-205ENST00000449415 PTGER2P43116 358 aa23.97■■□□□ 1.43
RFTN1-205ENST00000449415 UBR3Q6ZT12 1888 aa23.97■■□□□ 1.43
RFTN1-205ENST00000449415 COL23A1Q86Y22 540 aaPredicted RBP23.97■■□□□ 1.43
RFTN1-205ENST00000449415 SLC4A9Q96Q91 983 aa23.97■■□□□ 1.43
RFTN1-205ENST00000449415 GNAT3A8MTJ3 354 aa23.96■■□□□ 1.43
RFTN1-205ENST00000449415 HMGB2P26583 209 aaKnown RBP23.96■■□□□ 1.43
RFTN1-205ENST00000449415 SMIM5Q71RC9 77 aa23.96■■□□□ 1.43
RFTN1-205ENST00000449415 MRC1P22897 1456 aa23.95■■□□□ 1.42
RFTN1-205ENST00000449415 MYBBP1AQ9BQG0 1328 aaKnown RBP23.94■■□□□ 1.42
RFTN1-205ENST00000449415 PHF14O94880 888 aa23.94■■□□□ 1.42
RFTN1-205ENST00000449415 SLC39A6Q13433 755 aa23.94■■□□□ 1.42
RFTN1-205ENST00000449415 AMIGO3Q86WK7 504 aa23.94■■□□□ 1.42
RFTN1-205ENST00000449415 COL5A3P25940 1745 aaPredicted RBP23.93■■□□□ 1.42
RFTN1-205ENST00000449415 ZNF831Q5JPB2 1677 aa23.93■■□□□ 1.42
RFTN1-205ENST00000449415 IL17REQ8NFR9 667 aa23.93■■□□□ 1.42
RFTN1-205ENST00000449415 SLC16A10Q8TF71 515 aa23.93■■□□□ 1.42
RFTN1-205ENST00000449415 ZNF316A6NFI3 1004 aaPredicted RBP23.92■■□□□ 1.42
RFTN1-205ENST00000449415 GNPATO15228 680 aa23.91■■□□□ 1.42
RFTN1-205ENST00000449415 SGIP1Q9BQI5 828 aa23.91■■□□□ 1.42
RFTN1-205ENST00000449415 TJP1Q07157 1748 aa23.9■■□□□ 1.42
RFTN1-205ENST00000449415 TEFQ10587 303 aa23.9■■□□□ 1.42
RFTN1-205ENST00000449415 MSL1Q68DK7 614 aa23.9■■□□□ 1.42
RFTN1-205ENST00000449415 SIPA1L3O60292 1781 aaPredicted RBP23.9■■□□□ 1.42
RFTN1-205ENST00000449415 DLG5Q8TDM6 1919 aa23.9■■□□□ 1.42
RFTN1-205ENST00000449415 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.89■■□□□ 1.41
RFTN1-205ENST00000449415 FLAD1Q8NFF5 587 aa23.89■■□□□ 1.41
RFTN1-205ENST00000449415 MYH14Q7Z406 1995 aaKnown RBP23.89■■□□□ 1.41
RFTN1-205ENST00000449415 COL24A1Q17RW2 1714 aa23.88■■□□□ 1.41
RFTN1-205ENST00000449415 NEFMP07197 916 aa23.88■■□□□ 1.41
RFTN1-205ENST00000449415 PRKRIP1Q9H875 184 aaPredicted RBP23.88■■□□□ 1.41
RFTN1-205ENST00000449415 MCM10Q7L590 875 aa23.87■■□□□ 1.41
RFTN1-205ENST00000449415 RTF1Q92541 710 aaKnown RBP23.87■■□□□ 1.41
RFTN1-205ENST00000449415 ARXQ96QS3 562 aa23.87■■□□□ 1.41
RFTN1-205ENST00000449415 POLD1P28340 1107 aa23.86■■□□□ 1.41
RFTN1-205ENST00000449415 UBR2Q8IWV8 1755 aa23.86■■□□□ 1.41
RFTN1-205ENST00000449415 KCPQ6ZWJ8 1503 aa23.85■■□□□ 1.41
RFTN1-205ENST00000449415 SSFA2P28290 1259 aa23.85■■□□□ 1.41
RFTN1-205ENST00000449415 DCTN1Q14203 1278 aa23.85■■□□□ 1.41
RFTN1-205ENST00000449415 PLEKHF1Q96S99 279 aa23.85■■□□□ 1.41
RFTN1-205ENST00000449415 CEMIPQ8WUJ3 1361 aa23.84■■□□□ 1.41
RFTN1-205ENST00000449415 DNAJC10Q8IXB1 793 aa23.84■■□□□ 1.41
RFTN1-205ENST00000449415 TTC5Q8N0Z6 440 aa23.84■■□□□ 1.41
RFTN1-205ENST00000449415 FHDC1Q9C0D6 1143 aaPredicted RBP23.84■■□□□ 1.41
RFTN1-205ENST00000449415 RTCBQ9Y3I0 505 aaKnown RBP23.84■■□□□ 1.41
RFTN1-205ENST00000449415 CICQ96RK0 1608 aaPredicted RBP23.84■■□□□ 1.41
RFTN1-205ENST00000449415 CNTNAP4Q9C0A0 1308 aa23.84■■□□□ 1.41
RFTN1-205ENST00000449415 CRKLP46109 303 aaKnown RBP23.83■■□□□ 1.41
RFTN1-205ENST00000449415 RC3H1Q5TC82 1133 aaKnown RBP23.83■■□□□ 1.41
RFTN1-205ENST00000449415 KLHL34Q8N239 644 aa23.83■■□□□ 1.41
RFTN1-205ENST00000449415 MAPK8IP3Q9UPT6 1336 aa23.83■■□□□ 1.4
RFTN1-205ENST00000449415 PNNQ9H307 717 aaKnown RBP23.82■■□□□ 1.4
RFTN1-205ENST00000449415 TRAPPC3LQ5T215 181 aa23.81■■□□□ 1.4
RFTN1-205ENST00000449415 BTBD11A6QL63 1104 aa23.8■■□□□ 1.4
RFTN1-205ENST00000449415 RPS6KA4O75676 772 aa23.8■■□□□ 1.4
RFTN1-205ENST00000449415 ZNF790Q6PG37 636 aa23.8■■□□□ 1.4
RFTN1-205ENST00000449415 KCNQ3O43525 872 aa23.79■■□□□ 1.4
RFTN1-205ENST00000449415 WDR43Q15061 677 aaKnown RBP eCLIP23.79■■□□□ 1.4
RFTN1-205ENST00000449415 NFE2L2Q16236 605 aa23.79■■□□□ 1.4
RFTN1-205ENST00000449415 SYT17Q9BSW7 474 aa23.79■■□□□ 1.4
RFTN1-205ENST00000449415 C4AP0C0L4 1744 aa23.79■■□□□ 1.4
RFTN1-205ENST00000449415 HTATSF1O43719 755 aaKnown RBP23.78■■□□□ 1.4
RFTN1-205ENST00000449415 ARHGEF1Q92888 912 aaKnown RBP23.78■■□□□ 1.4
RFTN1-205ENST00000449415 ZNF496Q96IT1 587 aaPredicted RBP23.78■■□□□ 1.4
RFTN1-205ENST00000449415 CYP19A1P11511 503 aaPredicted RBP23.77■■□□□ 1.4
RFTN1-205ENST00000449415 INTS5Q6P9B9 1019 aaKnown RBP23.77■■□□□ 1.4
RFTN1-205ENST00000449415 CCDC146Q8IYE0 955 aa23.77■■□□□ 1.4
RFTN1-205ENST00000449415 VSIG10Q8N0Z9 540 aa23.76■■□□□ 1.39
RFTN1-205ENST00000449415 CCDC87Q9NVE4 849 aa23.76■■□□□ 1.39
RFTN1-205ENST00000449415 RFC4P35249 363 aa23.75■■□□□ 1.39
RFTN1-205ENST00000449415 THUMPD2Q9BTF0 503 aaKnown RBP23.75■■□□□ 1.39
RFTN1-205ENST00000449415 HEG1Q9ULI3 1381 aa23.75■■□□□ 1.39
RFTN1-205ENST00000449415 ADRA2BP18089 450 aa23.74■■□□□ 1.39
RFTN1-205ENST00000449415 FMNL2Q96PY5 1086 aa23.74■■□□□ 1.39
RFTN1-205ENST00000449415 MIS18AQ9NYP9 233 aa23.73■■□□□ 1.39
RFTN1-205ENST00000449415 ADAMTS8Q9UP79 889 aa23.73■■□□□ 1.39
RFTN1-205ENST00000449415 RIPK4P57078 832 aa23.72■■□□□ 1.39
RFTN1-205ENST00000449415 TAF7Q15545 349 aaPredicted RBP23.72■■□□□ 1.39
RFTN1-205ENST00000449415 ZBTB1Q9Y2K1 713 aa23.72■■□□□ 1.39
RFTN1-205ENST00000449415 RRP7AQ9Y3A4 280 aaKnown RBP23.72■■□□□ 1.39
RFTN1-205ENST00000449415 CANXP27824 592 aaKnown RBP23.71■■□□□ 1.39
RFTN1-205ENST00000449415 SRP68Q9UHB9 627 aaKnown RBP23.71■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms