RNA–Protein interactions for RNA: ENST00000449234.1

RFX3-208, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 633 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-208ENST00000449234 GOLGA6L22H0YM25 854 aa14.16□□□□□ -0.14
RFX3-208ENST00000449234 GNAI2P04899 355 aa14.16□□□□□ -0.14
RFX3-208ENST00000449234 GSPT1P15170 499 aaKnown RBP14.16□□□□□ -0.14
RFX3-208ENST00000449234 FXR2P51116 673 aaKnown RBP eCLIP14.16□□□□□ -0.14
RFX3-208ENST00000449234 SRCIN1Q9C0H9 1055 aa14.16□□□□□ -0.14
RFX3-208ENST00000449234 BRPF3Q9ULD4 1205 aa14.16□□□□□ -0.14
RFX3-208ENST00000449234 CACNA1FO60840 1977 aa14.16□□□□□ -0.14
RFX3-208ENST00000449234 FMN2Q9NZ56 1722 aa14.15□□□□□ -0.14
RFX3-208ENST00000449234 ATP8B2P98198 1209 aa14.15□□□□□ -0.14
RFX3-208ENST00000449234 PXDNLA1KZ92 1463 aa14.14□□□□□ -0.15
RFX3-208ENST00000449234 HSP90AA1P07900 732 aaKnown RBP14.14□□□□□ -0.15
RFX3-208ENST00000449234 HOXB7P09629 217 aa14.14□□□□□ -0.15
RFX3-208ENST00000449234 MCM2P49736 904 aa14.14□□□□□ -0.15
RFX3-208ENST00000449234 TAF7Q15545 349 aaPredicted RBP14.14□□□□□ -0.15
RFX3-208ENST00000449234 TNPO1Q92973 898 aaKnown RBP14.14□□□□□ -0.15
RFX3-208ENST00000449234 SLC26A8Q96RN1 970 aa14.14□□□□□ -0.15
RFX3-208ENST00000449234 XRN1Q8IZH2 1706 aaKnown RBP14.14□□□□□ -0.15
RFX3-208ENST00000449234 AOX1Q06278 1338 aa14.14□□□□□ -0.15
RFX3-208ENST00000449234 IL17RAQ96F46 866 aa14.13□□□□□ -0.15
RFX3-208ENST00000449234 LRRC37A3O60309 1634 aa14.12□□□□□ -0.15
RFX3-208ENST00000449234 MSH6P52701 1360 aa14.12□□□□□ -0.15
RFX3-208ENST00000449234 ERC2O15083 957 aa14.12□□□□□ -0.15
RFX3-208ENST00000449234 ST18O60284 1047 aa14.12□□□□□ -0.15
RFX3-208ENST00000449234 SDSP20132 328 aa14.12□□□□□ -0.15
RFX3-208ENST00000449234 HOXC9P31274 260 aa14.12□□□□□ -0.15
RFX3-208ENST00000449234 NLRP6P59044 892 aa14.12□□□□□ -0.15
RFX3-208ENST00000449234 PIP4P2Q8N4L2 257 aa14.12□□□□□ -0.15
RFX3-208ENST00000449234 SPRYD3Q8NCJ5 442 aa14.12□□□□□ -0.15
RFX3-208ENST00000449234 MEIS3Q99687 375 aa14.12□□□□□ -0.15
RFX3-208ENST00000449234 STAP2Q9UGK3 403 aa14.12□□□□□ -0.15
RFX3-208ENST00000449234 RAB11FIP3O75154 756 aa14.11□□□□□ -0.15
RFX3-208ENST00000449234 MAP3K5Q99683 1374 aa14.1□□□□□ -0.15
RFX3-208ENST00000449234 IBTKQ9P2D0 1353 aaPredicted RBP14.1□□□□□ -0.15
RFX3-208ENST00000449234 ADGRL3Q9HAR2 1447 aa14.1□□□□□ -0.15
RFX3-208ENST00000449234 XRCC6P12956 609 aaKnown RBP eCLIP14.1□□□□□ -0.15
RFX3-208ENST00000449234 PDE1AP54750 535 aa14.1□□□□□ -0.15
RFX3-208ENST00000449234 ANAPC15P60006 121 aa14.1□□□□□ -0.15
RFX3-208ENST00000449234 KRT24Q2M2I5 525 aa14.1□□□□□ -0.15
RFX3-208ENST00000449234 C16orf71Q8IYS4 520 aaPredicted RBP14.1□□□□□ -0.15
RFX3-208ENST00000449234 HDAC5Q9UQL6 1122 aa14.1□□□□□ -0.15
RFX3-208ENST00000449234 SALL3Q9BXA9 1300 aa14.1□□□□□ -0.15
RFX3-208ENST00000449234 FLIIQ13045 1269 aa14.09□□□□□ -0.15
RFX3-208ENST00000449234 IP6K1Q92551 441 aa14.09□□□□□ -0.15
RFX3-208ENST00000449234 LRRCC1Q9C099 1032 aa14.09□□□□□ -0.15
RFX3-208ENST00000449234 PIK3C2AO00443 1686 aa14.09□□□□□ -0.15
RFX3-208ENST00000449234 MCCP23508 829 aa14.08□□□□□ -0.16
RFX3-208ENST00000449234 G2E3Q7L622 706 aa14.08□□□□□ -0.16
RFX3-208ENST00000449234 KCNH5Q8NCM2 988 aa14.08□□□□□ -0.16
RFX3-208ENST00000449234 FOXO3O43524 673 aa14.07□□□□□ -0.16
RFX3-208ENST00000449234 CYP2E1P05181 493 aaPredicted RBP14.07□□□□□ -0.16
RFX3-208ENST00000449234 CEBPAP49715 358 aaPredicted RBP14.07□□□□□ -0.16
RFX3-208ENST00000449234 IL17REQ8NFR9 667 aa14.07□□□□□ -0.16
RFX3-208ENST00000449234 NWD1Q149M9 1564 aa14.07□□□□□ -0.16
RFX3-208ENST00000449234 CEP170BQ9Y4F5 1589 aaPredicted RBP14.07□□□□□ -0.16
RFX3-208ENST00000449234 N4BP2Q86UW6 1770 aaPredicted RBP14.06□□□□□ -0.16
RFX3-208ENST00000449234 NUTM2FA1L443 756 aa14.06□□□□□ -0.16
RFX3-208ENST00000449234 KLHL40Q2TBA0 621 aa14.06□□□□□ -0.16
RFX3-208ENST00000449234 HSP90AB4PQ58FF6 505 aa14.06□□□□□ -0.16
RFX3-208ENST00000449234 ABTB2Q8N961 1025 aa14.06□□□□□ -0.16
RFX3-208ENST00000449234 SSH3Q8TE77 659 aa14.06□□□□□ -0.16
RFX3-208ENST00000449234 GRPEL1Q9HAV7 217 aa14.06□□□□□ -0.16
RFX3-208ENST00000449234 CEMIPQ8WUJ3 1361 aa14.06□□□□□ -0.16
RFX3-208ENST00000449234 CD2BP2O95400 341 aaKnown RBP14.05□□□□□ -0.16
RFX3-208ENST00000449234 BAG4O95429 457 aaKnown RBP14.05□□□□□ -0.16
RFX3-208ENST00000449234 FKBP5Q13451 457 aaPredicted RBP14.05□□□□□ -0.16
RFX3-208ENST00000449234 SLC4A10Q6U841 1118 aa14.05□□□□□ -0.16
RFX3-208ENST00000449234 MIS18AQ9NYP9 233 aa14.05□□□□□ -0.16
RFX3-208ENST00000449234 PHF8Q9UPP1 1060 aa14.05□□□□□ -0.16
RFX3-208ENST00000449234 CLEC11AQ9Y240 323 aa14.05□□□□□ -0.16
RFX3-208ENST00000449234 AMOTQ4VCS5 1084 aa14.04□□□□□ -0.16
RFX3-208ENST00000449234 PROM2Q8N271 834 aa14.04□□□□□ -0.16
RFX3-208ENST00000449234 INTS4Q96HW7 963 aaKnown RBP14.04□□□□□ -0.16
RFX3-208ENST00000449234 OVOS2A0A0G2JMS6 1433 aa14.04□□□□□ -0.16
RFX3-208ENST00000449234 FER1L4A9Z1Z3 1794 aa14.04□□□□□ -0.16
RFX3-208ENST00000449234 F6X3S4 739 aa14.03□□□□□ -0.16
RFX3-208ENST00000449234 SMARCA5O60264 1052 aaPredicted RBP14.03□□□□□ -0.16
RFX3-208ENST00000449234 KCNA6P17658 529 aa14.03□□□□□ -0.16
RFX3-208ENST00000449234 MX1P20591 662 aa14.03□□□□□ -0.16
RFX3-208ENST00000449234 ANKLE2Q86XL3 938 aa14.03□□□□□ -0.16
RFX3-208ENST00000449234 KLHL34Q8N239 644 aa14.03□□□□□ -0.16
RFX3-208ENST00000449234 OTUD7AQ8TE49 926 aaPredicted RBP14.03□□□□□ -0.16
RFX3-208ENST00000449234 ESYT1Q9BSJ8 1104 aa14.03□□□□□ -0.16
RFX3-208ENST00000449234 RGPD8O14715 1765 aaPredicted RBP14.03□□□□□ -0.16
RFX3-208ENST00000449234 MARF1Q9Y4F3 1742 aaKnown RBP14.02□□□□□ -0.16
RFX3-208ENST00000449234 PHRF1Q9P1Y6 1649 aaKnown RBP14.02□□□□□ -0.16
RFX3-208ENST00000449234 UBTFL1P0CB47 393 aaPredicted RBP14.02□□□□□ -0.17
RFX3-208ENST00000449234 CUL4AQ13619 759 aa14.02□□□□□ -0.17
RFX3-208ENST00000449234 PLEKHO1Q53GL0 409 aaPredicted RBP14.02□□□□□ -0.17
RFX3-208ENST00000449234 USP44Q9H0E7 712 aa14.02□□□□□ -0.17
RFX3-208ENST00000449234 FAM208AQ9UK61 1670 aaKnown RBP14.01□□□□□ -0.17
RFX3-208ENST00000449234 LMTK3Q96Q04 1460 aa14.01□□□□□ -0.17
RFX3-208ENST00000449234 CHMLP26374 656 aa14.01□□□□□ -0.17
RFX3-208ENST00000449234 SSFA2P28290 1259 aa14.01□□□□□ -0.17
RFX3-208ENST00000449234 ZNF445P59923 1031 aa14.01□□□□□ -0.17
RFX3-208ENST00000449234 AKAP4Q5JQC9 854 aa14.01□□□□□ -0.17
RFX3-208ENST00000449234 HDGFL1Q5TGJ6 251 aa14.01□□□□□ -0.17
RFX3-208ENST00000449234 MED1Q15648 1581 aaPredicted RBP14□□□□□ -0.17
RFX3-208ENST00000449234 NCAPD2Q15021 1401 aa14□□□□□ -0.17
RFX3-208ENST00000449234 CHD2O14647 1828 aaKnown RBP14□□□□□ -0.17
RFX3-208ENST00000449234 SOX12O15370 315 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms