RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 RCAN3Q9UKA8 241 aa24.96■■□□□ 1.59
RPS28-202ENST00000449223 PAPPAQ13219 1627 aa24.95■■□□□ 1.59
RPS28-202ENST00000449223 ITGB4P16144 1822 aa24.95■■□□□ 1.58
RPS28-202ENST00000449223 RNF123Q5XPI4 1314 aa24.94■■□□□ 1.58
RPS28-202ENST00000449223 ZNF428Q96B54 188 aa24.94■■□□□ 1.58
RPS28-202ENST00000449223 DOT1LQ8TEK3 1739 aa24.93■■□□□ 1.58
RPS28-202ENST00000449223 SOS1Q07889 1333 aaPredicted RBP24.92■■□□□ 1.58
RPS28-202ENST00000449223 BTBD11A6QL63 1104 aa24.92■■□□□ 1.58
RPS28-202ENST00000449223 MARCH10Q8NA82 808 aaPredicted RBP24.92■■□□□ 1.58
RPS28-202ENST00000449223 BCL9O00512 1426 aa24.92■■□□□ 1.58
RPS28-202ENST00000449223 NFATC2IPQ8NCF5 419 aa24.91■■□□□ 1.58
RPS28-202ENST00000449223 MIS18AQ9NYP9 233 aa24.91■■□□□ 1.58
RPS28-202ENST00000449223 UBR2Q8IWV8 1755 aa24.91■■□□□ 1.58
RPS28-202ENST00000449223 CABP4P57796 275 aa24.91■■□□□ 1.58
RPS28-202ENST00000449223 HEG1Q9ULI3 1381 aa24.9■■□□□ 1.58
RPS28-202ENST00000449223 C8orf58Q8NAV2 365 aa24.89■■□□□ 1.57
RPS28-202ENST00000449223 VAMP4O75379 141 aa24.88■■□□□ 1.57
RPS28-202ENST00000449223 RARSP54136 660 aaKnown RBP24.88■■□□□ 1.57
RPS28-202ENST00000449223 EIF4A1P60842 406 aaKnown RBP24.87■■□□□ 1.57
RPS28-202ENST00000449223 RBM6P78332 1123 aaKnown RBP24.87■■□□□ 1.57
RPS28-202ENST00000449223 TWISTNBQ3B726 338 aaPredicted RBP24.87■■□□□ 1.57
RPS28-202ENST00000449223 ZNF790Q6PG37 636 aa24.87■■□□□ 1.57
RPS28-202ENST00000449223 TSPYL6Q8N831 410 aa24.87■■□□□ 1.57
RPS28-202ENST00000449223 HOXB7P09629 217 aa24.86■■□□□ 1.57
RPS28-202ENST00000449223 SUPT16HQ9Y5B9 1047 aaKnown RBP24.86■■□□□ 1.57
RPS28-202ENST00000449223 ALDH1L2Q3SY69 923 aa24.86■■□□□ 1.57
RPS28-202ENST00000449223 SEPT12Q8IYM1 358 aa24.86■■□□□ 1.57
RPS28-202ENST00000449223 TMOD3Q9NYL9 352 aa24.84■■□□□ 1.57
RPS28-202ENST00000449223 RGS17Q9UGC6 210 aaPredicted RBP24.84■■□□□ 1.57
RPS28-202ENST00000449223 BRWD3Q6RI45 1802 aa24.84■■□□□ 1.57
RPS28-202ENST00000449223 KCNQ3O43525 872 aa24.83■■□□□ 1.57
RPS28-202ENST00000449223 BRPF1P55201 1214 aaPredicted RBP24.83■■□□□ 1.57
RPS28-202ENST00000449223 KRT24Q2M2I5 525 aa24.83■■□□□ 1.57
RPS28-202ENST00000449223 KCPQ6ZWJ8 1503 aa24.83■■□□□ 1.57
RPS28-202ENST00000449223 CACNA1FO60840 1977 aa24.82■■□□□ 1.56
RPS28-202ENST00000449223 A0A0G2JS52 829 aa24.81■■□□□ 1.56
RPS28-202ENST00000449223 MYT1Q01538 1121 aa24.81■■□□□ 1.56
RPS28-202ENST00000449223 NHSQ6T4R5 1651 aa24.81■■□□□ 1.56
RPS28-202ENST00000449223 PIGBQ92521 554 aa24.81■■□□□ 1.56
RPS28-202ENST00000449223 SBF2Q86WG5 1849 aa24.8■■□□□ 1.56
RPS28-202ENST00000449223 RRP1P56182 461 aaKnown RBP24.8■■□□□ 1.56
RPS28-202ENST00000449223 SSH1Q8WYL5 1049 aa24.8■■□□□ 1.56
RPS28-202ENST00000449223 ELL2O00472 640 aaPredicted RBP24.79■■□□□ 1.56
RPS28-202ENST00000449223 SLC39A6Q13433 755 aa24.79■■□□□ 1.56
RPS28-202ENST00000449223 TTC5Q8N0Z6 440 aa24.79■■□□□ 1.56
RPS28-202ENST00000449223 CHMP4AQ9BY43 222 aa24.79■■□□□ 1.56
RPS28-202ENST00000449223 C5P01031 1676 aa24.79■■□□□ 1.56
RPS28-202ENST00000449223 LAMB4A4D0S4 1761 aa24.78■■□□□ 1.56
RPS28-202ENST00000449223 GIGYF1O75420 1035 aaPredicted RBP24.78■■□□□ 1.56
RPS28-202ENST00000449223 BCAR3O75815 825 aa24.78■■□□□ 1.56
RPS28-202ENST00000449223 KAT6BQ8WYB5 2073 aa24.78■■□□□ 1.56
RPS28-202ENST00000449223 RXRBP28702 533 aa24.77■■□□□ 1.56
RPS28-202ENST00000449223 PRIM1P49642 420 aaKnown RBP24.77■■□□□ 1.56
RPS28-202ENST00000449223 ZNF496Q96IT1 587 aaPredicted RBP24.77■■□□□ 1.56
RPS28-202ENST00000449223 FMNL2Q96PY5 1086 aa24.77■■□□□ 1.56
RPS28-202ENST00000449223 CICQ96RK0 1608 aaPredicted RBP24.76■■□□□ 1.55
RPS28-202ENST00000449223 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.75■■□□□ 1.55
RPS28-202ENST00000449223 SMC4Q9NTJ3 1288 aa24.75■■□□□ 1.55
RPS28-202ENST00000449223 ATG3Q9NT62 314 aa24.74■■□□□ 1.55
RPS28-202ENST00000449223 KIF16BQ96L93 1317 aa24.74■■□□□ 1.55
RPS28-202ENST00000449223 ZNF831Q5JPB2 1677 aa24.74■■□□□ 1.55
RPS28-202ENST00000449223 RGS12O14924 1447 aa24.73■■□□□ 1.55
RPS28-202ENST00000449223 CCDC30Q5VVM6 783 aa24.73■■□□□ 1.55
RPS28-202ENST00000449223 POTEAQ6S8J7 498 aa24.73■■□□□ 1.55
RPS28-202ENST00000449223 ILDR1Q86SU0 546 aaPredicted RBP24.73■■□□□ 1.55
RPS28-202ENST00000449223 MRPL50Q8N5N7 158 aaKnown RBP24.73■■□□□ 1.55
RPS28-202ENST00000449223 SNRPA1P09661 255 aaKnown RBP24.72■■□□□ 1.55
RPS28-202ENST00000449223 KRT27Q7Z3Y8 459 aa24.72■■□□□ 1.55
RPS28-202ENST00000449223 VSIG10Q8N0Z9 540 aa24.72■■□□□ 1.55
RPS28-202ENST00000449223 ASAP1Q9ULH1 1129 aa24.72■■□□□ 1.55
RPS28-202ENST00000449223 SYTL4Q96C24 671 aaPredicted RBP24.71■■□□□ 1.55
RPS28-202ENST00000449223 BCL2L13Q9BXK5 485 aa24.71■■□□□ 1.55
RPS28-202ENST00000449223 BTAF1O14981 1849 aa24.71■■□□□ 1.55
RPS28-202ENST00000449223 ACSBG1Q96GR2 724 aa24.71■■□□□ 1.55
RPS28-202ENST00000449223 HDGFL1Q5TGJ6 251 aa24.7■■□□□ 1.54
RPS28-202ENST00000449223 ARHGAP45Q92619 1136 aa24.69■■□□□ 1.54
RPS28-202ENST00000449223 KCNQ2O43526 872 aa24.68■■□□□ 1.54
RPS28-202ENST00000449223 FAM196AQ6ZSG2 479 aa24.68■■□□□ 1.54
RPS28-202ENST00000449223 STK31Q9BXU1 1019 aa24.67■■□□□ 1.54
RPS28-202ENST00000449223 PRAMEF22A3QJZ6 481 aa24.66■■□□□ 1.54
RPS28-202ENST00000449223 PLIN1O60240 522 aa24.66■■□□□ 1.54
RPS28-202ENST00000449223 NEFLP07196 543 aa24.66■■□□□ 1.54
RPS28-202ENST00000449223 PDE3AQ14432 1141 aa24.66■■□□□ 1.54
RPS28-202ENST00000449223 SMARCC1Q92922 1105 aaPredicted RBP24.66■■□□□ 1.54
RPS28-202ENST00000449223 TJP1Q07157 1748 aa24.66■■□□□ 1.54
RPS28-202ENST00000449223 EP400Q96L91 3159 aa24.66■■□□□ 1.54
RPS28-202ENST00000449223 IPO8O15397 1037 aaKnown RBP24.66■■□□□ 1.54
RPS28-202ENST00000449223 ZKSCAN2Q63HK3 967 aa24.66■■□□□ 1.54
RPS28-202ENST00000449223 ERBB4Q15303 1308 aa24.65■■□□□ 1.54
RPS28-202ENST00000449223 PTCD1O75127 700 aaKnown RBP24.65■■□□□ 1.54
RPS28-202ENST00000449223 FAM182BQ5T319 152 aa24.65■■□□□ 1.54
RPS28-202ENST00000449223 TEX13AQ9BXU3 409 aaPredicted RBP24.65■■□□□ 1.54
RPS28-202ENST00000449223 DBF4Q9UBU7 674 aaPredicted RBP24.65■■□□□ 1.54
RPS28-202ENST00000449223 NOB1Q9ULX3 412 aaKnown RBP24.65■■□□□ 1.54
RPS28-202ENST00000449223 SLC4A2P04920 1241 aa24.64■■□□□ 1.53
RPS28-202ENST00000449223 ATF7IPQ6VMQ6 1270 aa24.64■■□□□ 1.53
RPS28-202ENST00000449223 LY75O60449 1722 aa24.64■■□□□ 1.53
RPS28-202ENST00000449223 PALLDQ8WX93 1383 aa24.64■■□□□ 1.53
RPS28-202ENST00000449223 PTPRCP08575 1304 aa24.63■■□□□ 1.53
RPS28-202ENST00000449223 EIF2S2P20042 333 aaKnown RBP24.63■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms