RNA–Protein interactions for RNA: ENST00000449082.2

SCN10A-201, Transcript of sodium voltage-gated channel alpha subunit 10, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN10A, Length 6,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10A-201ENST00000449082 ERCC4Q92889 916 aaPredicted RBP12.02□□□□□ -0.49
SCN10A-201ENST00000449082 TTC21BQ7Z4L5 1316 aa12.02□□□□□ -0.49
SCN10A-201ENST00000449082 ADGRF5Q8IZF2 1346 aa12.02□□□□□ -0.49
SCN10A-201ENST00000449082 CRACR2BQ8N4Y2 399 aaPredicted RBP12.01□□□□□ -0.49
SCN10A-201ENST00000449082 RPGRQ92834 1020 aaKnown RBP12.01□□□□□ -0.49
SCN10A-201ENST00000449082 TEX13AQ9BXU3 409 aaPredicted RBP12.01□□□□□ -0.49
SCN10A-201ENST00000449082 TRMT112Q9UI30 125 aaKnown RBP12.01□□□□□ -0.49
SCN10A-201ENST00000449082 EXOC6BQ9Y2D4 811 aa12.01□□□□□ -0.49
SCN10A-201ENST00000449082 U3KPZ7 1027 aaPredicted RBP12.01□□□□□ -0.49
SCN10A-201ENST00000449082 NCOA1Q15788 1441 aa12.01□□□□□ -0.49
SCN10A-201ENST00000449082 PATL2C9JE40 543 aaKnown RBP12.01□□□□□ -0.49
SCN10A-201ENST00000449082 TANGO6Q9C0B7 1094 aa12.01□□□□□ -0.49
SCN10A-201ENST00000449082 WDR97A6NE52 1622 aa12.01□□□□□ -0.49
SCN10A-201ENST00000449082 SLC5A1P13866 664 aa12.01□□□□□ -0.49
SCN10A-201ENST00000449082 ZNF771Q7L3S4 317 aaPredicted RBP12.01□□□□□ -0.49
SCN10A-201ENST00000449082 TXLNBQ8N3L3 684 aa12.01□□□□□ -0.49
SCN10A-201ENST00000449082 PPFIBP1Q86W92 1011 aa12.01□□□□□ -0.49
SCN10A-201ENST00000449082 EMILIN1Q9Y6C2 1016 aa12.01□□□□□ -0.49
SCN10A-201ENST00000449082 DZIP1Q86YF9 867 aaKnown RBP12□□□□□ -0.49
SCN10A-201ENST00000449082 SSBP05455 408 aaKnown RBP eCLIP12□□□□□ -0.49
SCN10A-201ENST00000449082 MX1P20591 662 aa12□□□□□ -0.49
SCN10A-201ENST00000449082 DBF4Q9UBU7 674 aaPredicted RBP12□□□□□ -0.49
SCN10A-201ENST00000449082 CEP131Q9UPN4 1083 aa12□□□□□ -0.49
SCN10A-201ENST00000449082 ANKRD18BA2A2Z9 1011 aa12□□□□□ -0.49
SCN10A-201ENST00000449082 MAP3K12Q12852 859 aa12□□□□□ -0.49
SCN10A-201ENST00000449082 CADPS2Q86UW7 1296 aa12□□□□□ -0.49
SCN10A-201ENST00000449082 SLF2Q8IX21 1173 aa12□□□□□ -0.49
SCN10A-201ENST00000449082 MKNK2Q9HBH9 465 aa12□□□□□ -0.49
SCN10A-201ENST00000449082 DNAAF4Q8WXU2 420 aa12□□□□□ -0.49
SCN10A-201ENST00000449082 SPATA32Q96LK8 384 aa12□□□□□ -0.49
SCN10A-201ENST00000449082 SEC63Q9UGP8 760 aaKnown RBP12□□□□□ -0.49
SCN10A-201ENST00000449082 NOS1P29475 1434 aa12□□□□□ -0.49
SCN10A-201ENST00000449082 WDHD1O75717 1129 aaPredicted RBP11.99□□□□□ -0.49
SCN10A-201ENST00000449082 NSD2O96028 1365 aa11.99□□□□□ -0.49
SCN10A-201ENST00000449082 IFNL2Q8IZJ0 200 aa11.99□□□□□ -0.49
SCN10A-201ENST00000449082 DEF6Q9H4E7 631 aa11.99□□□□□ -0.49
SCN10A-201ENST00000449082 TNIP1Q15025 636 aa11.99□□□□□ -0.49
SCN10A-201ENST00000449082 CBFA2T2O43439 604 aa11.98□□□□□ -0.49
SCN10A-201ENST00000449082 CEP57L1Q8IYX8 460 aa11.98□□□□□ -0.49
SCN10A-201ENST00000449082 SCAF11Q99590 1463 aaKnown RBP11.98□□□□□ -0.49
SCN10A-201ENST00000449082 MINDY4BA8MYZ0 360 aa11.98□□□□□ -0.49
SCN10A-201ENST00000449082 CASTP20810 708 aaKnown RBP11.98□□□□□ -0.49
SCN10A-201ENST00000449082 NAPBQ9H115 298 aa11.98□□□□□ -0.49
SCN10A-201ENST00000449082 DHX29Q7Z478 1369 aaKnown RBP11.98□□□□□ -0.49
SCN10A-201ENST00000449082 PIBF1Q8WXW3 757 aa11.98□□□□□ -0.49
SCN10A-201ENST00000449082 C14orf93Q9H972 538 aaKnown RBP11.98□□□□□ -0.49
SCN10A-201ENST00000449082 TNRQ92752 1358 aa11.98□□□□□ -0.49
SCN10A-201ENST00000449082 BOLA2Q9H3K6 86 aa11.97□□□□□ -0.49
SCN10A-201ENST00000449082 MAP3K1Q13233 1512 aa11.97□□□□□ -0.49
SCN10A-201ENST00000449082 MATR3P43243 847 aaKnown RBP eCLIP11.97□□□□□ -0.49
SCN10A-201ENST00000449082 SSH1Q8WYL5 1049 aa11.97□□□□□ -0.49
SCN10A-201ENST00000449082 CCDC196A0A1B0GTZ2 297 aa11.97□□□□□ -0.49
SCN10A-201ENST00000449082 PTPRCP08575 1304 aa11.97□□□□□ -0.49
SCN10A-201ENST00000449082 BACH2Q9BYV9 841 aa11.97□□□□□ -0.49
SCN10A-201ENST00000449082 A0A087WZG4 1122 aa11.96□□□□□ -0.49
SCN10A-201ENST00000449082 ZNF444Q8N0Y2 327 aaPredicted RBP11.96□□□□□ -0.49
SCN10A-201ENST00000449082 MSH6P52701 1360 aa11.96□□□□□ -0.49
SCN10A-201ENST00000449082 ERLIN2O94905 339 aa11.96□□□□□ -0.49
SCN10A-201ENST00000449082 RARSP54136 660 aaKnown RBP11.96□□□□□ -0.49
SCN10A-201ENST00000449082 CCDC184Q52MB2 194 aa11.95□□□□□ -0.5
SCN10A-201ENST00000449082 DNAJC5BQ9UF47 199 aa11.95□□□□□ -0.5
SCN10A-201ENST00000449082 NKTRP30414 1462 aaKnown RBP11.95□□□□□ -0.5
SCN10A-201ENST00000449082 CDC5LQ99459 802 aaKnown RBP11.95□□□□□ -0.5
SCN10A-201ENST00000449082 CIZ1Q9ULV3 898 aaPredicted RBP11.95□□□□□ -0.5
SCN10A-201ENST00000449082 HMGB1P09429 215 aaKnown RBP11.95□□□□□ -0.5
SCN10A-201ENST00000449082 DESP17661 470 aa11.95□□□□□ -0.5
SCN10A-201ENST00000449082 NOM1Q5C9Z4 860 aaKnown RBP11.95□□□□□ -0.5
SCN10A-201ENST00000449082 RNF41Q9H4P4 317 aaPredicted RBP11.95□□□□□ -0.5
SCN10A-201ENST00000449082 IQCA1Q86XH1 822 aa11.95□□□□□ -0.5
SCN10A-201ENST00000449082 ANKRD24Q8TF21 1146 aa11.95□□□□□ -0.5
SCN10A-201ENST00000449082 PPP1R42Q7Z4L9 355 aa11.95□□□□□ -0.5
SCN10A-201ENST00000449082 SPC24Q8NBT2 197 aa11.95□□□□□ -0.5
SCN10A-201ENST00000449082 CTCFLQ8NI51 663 aaPredicted RBP11.95□□□□□ -0.5
SCN10A-201ENST00000449082 ACEP12821 1306 aa11.95□□□□□ -0.5
SCN10A-201ENST00000449082 SMARCA5O60264 1052 aaPredicted RBP11.94□□□□□ -0.5
SCN10A-201ENST00000449082 PRPF40BQ6NWY9 871 aaKnown RBP11.94□□□□□ -0.5
SCN10A-201ENST00000449082 LRRFIP2Q9Y608 721 aaKnown RBP11.94□□□□□ -0.5
SCN10A-201ENST00000449082 TEX14Q8IWB6 1497 aa11.94□□□□□ -0.5
SCN10A-201ENST00000449082 URB2Q14146 1524 aaKnown RBP11.94□□□□□ -0.5
SCN10A-201ENST00000449082 F6X3S4 739 aa11.94□□□□□ -0.5
SCN10A-201ENST00000449082 DDX11Q96FC9 970 aa11.94□□□□□ -0.5
SCN10A-201ENST00000449082 TRIM21P19474 475 aaKnown RBP11.94□□□□□ -0.5
SCN10A-201ENST00000449082 NUP62CLQ9H1M0 184 aa11.94□□□□□ -0.5
SCN10A-201ENST00000449082 GPTP24298 496 aa11.94□□□□□ -0.5
SCN10A-201ENST00000449082 ZBTB3Q9H5J0 574 aa11.94□□□□□ -0.5
SCN10A-201ENST00000449082 CWC25Q9NXE8 425 aaPredicted RBP11.94□□□□□ -0.5
SCN10A-201ENST00000449082 CCDC8Q9H0W5 538 aaPredicted RBP11.94□□□□□ -0.5
SCN10A-201ENST00000449082 BICRAQ9NZM4 1560 aa11.94□□□□□ -0.5
SCN10A-201ENST00000449082 SMTNL1A8MU46 457 aa11.93□□□□□ -0.5
SCN10A-201ENST00000449082 C6orf229H3BNL8 230 aa11.93□□□□□ -0.5
SCN10A-201ENST00000449082 ZNF213O14771 459 aa11.93□□□□□ -0.5
SCN10A-201ENST00000449082 DDX46Q7L014 1031 aaKnown RBP11.93□□□□□ -0.5
SCN10A-201ENST00000449082 BCL11BQ9C0K0 894 aaPredicted RBP11.93□□□□□ -0.5
SCN10A-201ENST00000449082 FLIIQ13045 1269 aa11.93□□□□□ -0.5
SCN10A-201ENST00000449082 MAP3K2Q9Y2U5 619 aa11.93□□□□□ -0.5
SCN10A-201ENST00000449082 RANBP6O60518 1105 aaKnown RBP11.93□□□□□ -0.5
SCN10A-201ENST00000449082 TTF1Q15361 905 aaPredicted RBP11.93□□□□□ -0.5
SCN10A-201ENST00000449082 CCDC181Q5TID7 509 aa11.93□□□□□ -0.5
SCN10A-201ENST00000449082 CUL5Q93034 780 aa11.93□□□□□ -0.5
SCN10A-201ENST00000449082 KDM5BQ9UGL1 1544 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms