RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 CNGA1P29973 690 aa6.91□□□□□ -1.3
CDC42BPA-209ENST00000448940 TNNI2P48788 182 aa6.91□□□□□ -1.3
CDC42BPA-209ENST00000448940 UIMC1Q96RL1 719 aa6.91□□□□□ -1.3
CDC42BPA-209ENST00000448940 MBD5Q9P267 1494 aa6.91□□□□□ -1.3
CDC42BPA-209ENST00000448940 ARHGAP31Q2M1Z3 1444 aa6.91□□□□□ -1.3
CDC42BPA-209ENST00000448940 LPXNO60711 386 aa6.91□□□□□ -1.3
CDC42BPA-209ENST00000448940 RBM27Q9P2N5 1060 aaKnown RBP6.91□□□□□ -1.3
CDC42BPA-209ENST00000448940 SART3Q15020 963 aaKnown RBP6.91□□□□□ -1.3
CDC42BPA-209ENST00000448940 DZIP3Q86Y13 1208 aaKnown RBP6.91□□□□□ -1.3
CDC42BPA-209ENST00000448940 RASSF8Q8NHQ8 419 aa6.91□□□□□ -1.3
CDC42BPA-209ENST00000448940 CNKSR1Q969H4 720 aa6.91□□□□□ -1.3
CDC42BPA-209ENST00000448940 PUS7Q96PZ0 661 aaKnown RBP6.91□□□□□ -1.3
CDC42BPA-209ENST00000448940 TBC1D2BQ9UPU7 963 aa6.91□□□□□ -1.3
CDC42BPA-209ENST00000448940 SUPT20HQ8NEM7 779 aa6.91□□□□□ -1.3
CDC42BPA-209ENST00000448940 RIMBP2O15034 1052 aa6.9□□□□□ -1.3
CDC42BPA-209ENST00000448940 HSP90AB4PQ58FF6 505 aa6.9□□□□□ -1.3
CDC42BPA-209ENST00000448940 SCLT1Q96NL6 688 aa6.9□□□□□ -1.3
CDC42BPA-209ENST00000448940 WDR17Q8IZU2 1322 aa6.9□□□□□ -1.3
CDC42BPA-209ENST00000448940 IQCA1LA6NCM1 817 aa6.9□□□□□ -1.3
CDC42BPA-209ENST00000448940 AKAP4Q5JQC9 854 aa6.9□□□□□ -1.3
CDC42BPA-209ENST00000448940 CCDC85AQ96PX6 553 aaPredicted RBP6.9□□□□□ -1.3
CDC42BPA-209ENST00000448940 UBTFL1P0CB47 393 aaPredicted RBP6.9□□□□□ -1.3
CDC42BPA-209ENST00000448940 HOXC9P31274 260 aa6.9□□□□□ -1.3
CDC42BPA-209ENST00000448940 SMCR8Q8TEV9 937 aaPredicted RBP6.9□□□□□ -1.3
CDC42BPA-209ENST00000448940 MPHOSPH6Q99547 160 aaKnown RBP6.9□□□□□ -1.3
CDC42BPA-209ENST00000448940 PLS1Q14651 629 aa6.9□□□□□ -1.31
CDC42BPA-209ENST00000448940 CAVIN4Q5BKX8 364 aa6.9□□□□□ -1.31
CDC42BPA-209ENST00000448940 NBPF11Q86T75 865 aa6.9□□□□□ -1.31
CDC42BPA-209ENST00000448940 DRC1Q96MC2 740 aa6.9□□□□□ -1.31
CDC42BPA-209ENST00000448940 MAP3K19Q56UN5 1328 aa6.9□□□□□ -1.31
CDC42BPA-209ENST00000448940 AKAP17AQ02040 695 aaKnown RBP6.89□□□□□ -1.31
CDC42BPA-209ENST00000448940 TXNRD1Q16881 649 aa6.89□□□□□ -1.31
CDC42BPA-209ENST00000448940 CLUAP1Q96AJ1 413 aa6.89□□□□□ -1.31
CDC42BPA-209ENST00000448940 IVNS1ABPQ9Y6Y0 642 aa6.89□□□□□ -1.31
CDC42BPA-209ENST00000448940 SHROOM2Q13796 1616 aa6.89□□□□□ -1.31
CDC42BPA-209ENST00000448940 IFIT2P09913 472 aaKnown RBP6.89□□□□□ -1.31
CDC42BPA-209ENST00000448940 WASHC4Q2M389 1173 aa6.89□□□□□ -1.31
CDC42BPA-209ENST00000448940 C2CD5Q86YS7 1000 aa6.89□□□□□ -1.31
CDC42BPA-209ENST00000448940 CPS1P31327 1500 aa6.89□□□□□ -1.31
CDC42BPA-209ENST00000448940 NBPF15Q8N660 670 aa6.89□□□□□ -1.31
CDC42BPA-209ENST00000448940 NOP2P46087 812 aaKnown RBP6.89□□□□□ -1.31
CDC42BPA-209ENST00000448940 NFATC2IPQ8NCF5 419 aa6.89□□□□□ -1.31
CDC42BPA-209ENST00000448940 CSADQ9Y600 493 aa6.89□□□□□ -1.31
CDC42BPA-209ENST00000448940 F8W031 263 aaPredicted RBP6.89□□□□□ -1.31
CDC42BPA-209ENST00000448940 PIM2Q9P1W9 311 aa6.89□□□□□ -1.31
CDC42BPA-209ENST00000448940 CEP126Q9P2H0 1117 aa6.89□□□□□ -1.31
CDC42BPA-209ENST00000448940 KCNQ2O43526 872 aa6.89□□□□□ -1.31
CDC42BPA-209ENST00000448940 RBM17Q96I25 401 aaKnown RBP6.89□□□□□ -1.31
CDC42BPA-209ENST00000448940 IFIT1P09914 478 aaKnown RBP6.88□□□□□ -1.31
CDC42BPA-209ENST00000448940 CALRP27797 417 aaKnown RBP6.88□□□□□ -1.31
CDC42BPA-209ENST00000448940 ALDH1B1P30837 517 aa6.88□□□□□ -1.31
CDC42BPA-209ENST00000448940 MKRN3Q13064 507 aaKnown RBP6.88□□□□□ -1.31
CDC42BPA-209ENST00000448940 SLF2Q8IX21 1173 aa6.88□□□□□ -1.31
CDC42BPA-209ENST00000448940 SLC16A10Q8TF71 515 aa6.88□□□□□ -1.31
CDC42BPA-209ENST00000448940 PICK1Q9NRD5 415 aa6.88□□□□□ -1.31
CDC42BPA-209ENST00000448940 ROBO2Q9HCK4 1378 aa6.88□□□□□ -1.31
CDC42BPA-209ENST00000448940 PPIP5K2O43314 1243 aa6.88□□□□□ -1.31
CDC42BPA-209ENST00000448940 ANP32EQ9BTT0 268 aa6.88□□□□□ -1.31
CDC42BPA-209ENST00000448940 NBPF3Q9H094 633 aa6.88□□□□□ -1.31
CDC42BPA-209ENST00000448940 NSFL1CQ9UNZ2 370 aaKnown RBP6.88□□□□□ -1.31
CDC42BPA-209ENST00000448940 TCOF1Q13428 1488 aaKnown RBP6.88□□□□□ -1.31
CDC42BPA-209ENST00000448940 NFE2L2Q16236 605 aa6.88□□□□□ -1.31
CDC42BPA-209ENST00000448940 CSPP1Q1MSJ5 1256 aa6.88□□□□□ -1.31
CDC42BPA-209ENST00000448940 SRCIN1Q9C0H9 1055 aa6.88□□□□□ -1.31
CDC42BPA-209ENST00000448940 KIF7Q2M1P5 1343 aa6.88□□□□□ -1.31
CDC42BPA-209ENST00000448940 LRRFIP2Q9Y608 721 aaKnown RBP6.88□□□□□ -1.31
CDC42BPA-209ENST00000448940 NSD2O96028 1365 aa6.88□□□□□ -1.31
CDC42BPA-209ENST00000448940 PLA2R1Q13018 1463 aa6.88□□□□□ -1.31
CDC42BPA-209ENST00000448940 SLC39A6Q13433 755 aa6.88□□□□□ -1.31
CDC42BPA-209ENST00000448940 ABCC3O15438 1527 aa6.88□□□□□ -1.31
CDC42BPA-209ENST00000448940 SLC3A2P08195 630 aaKnown RBP6.88□□□□□ -1.31
CDC42BPA-209ENST00000448940 ARHGEF5Q12774 1597 aa6.87□□□□□ -1.31
CDC42BPA-209ENST00000448940 MAST1Q9Y2H9 1570 aa6.87□□□□□ -1.31
CDC42BPA-209ENST00000448940 HOXD10P28358 340 aa6.87□□□□□ -1.31
CDC42BPA-209ENST00000448940 CCDC152Q4G0S7 254 aa6.87□□□□□ -1.31
CDC42BPA-209ENST00000448940 SLC27A3Q5K4L6 730 aa6.87□□□□□ -1.31
CDC42BPA-209ENST00000448940 MCM10Q7L590 875 aa6.87□□□□□ -1.31
CDC42BPA-209ENST00000448940 ARMC9Q7Z3E5 817 aa6.87□□□□□ -1.31
CDC42BPA-209ENST00000448940 SPC25Q9HBM1 224 aa6.87□□□□□ -1.31
CDC42BPA-209ENST00000448940 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.87□□□□□ -1.31
CDC42BPA-209ENST00000448940 GNAI3P08754 354 aa6.87□□□□□ -1.31
CDC42BPA-209ENST00000448940 PPP2R1AP30153 589 aa6.87□□□□□ -1.31
CDC42BPA-209ENST00000448940 SPOUT1Q5T280 376 aaKnown RBP6.87□□□□□ -1.31
CDC42BPA-209ENST00000448940 MICALL1Q8N3F8 863 aa6.87□□□□□ -1.31
CDC42BPA-209ENST00000448940 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.87□□□□□ -1.31
CDC42BPA-209ENST00000448940 DBF4Q9UBU7 674 aaPredicted RBP6.87□□□□□ -1.31
CDC42BPA-209ENST00000448940 MKRN1Q9UHC7 482 aaKnown RBP6.87□□□□□ -1.31
CDC42BPA-209ENST00000448940 PDZRN3Q9UPQ7 1066 aa6.87□□□□□ -1.31
CDC42BPA-209ENST00000448940 IFIT5Q13325 482 aaKnown RBP6.87□□□□□ -1.31
CDC42BPA-209ENST00000448940 UTP14AQ9BVJ6 771 aaKnown RBP6.87□□□□□ -1.31
CDC42BPA-209ENST00000448940 LOC102724428A0A0B4J2F2 783 aa6.87□□□□□ -1.31
CDC42BPA-209ENST00000448940 SIK1P57059 783 aa6.87□□□□□ -1.31
CDC42BPA-209ENST00000448940 TWISTNBQ3B726 338 aaPredicted RBP6.87□□□□□ -1.31
CDC42BPA-209ENST00000448940 GPHNQ9NQX3 736 aaPredicted RBP6.87□□□□□ -1.31
CDC42BPA-209ENST00000448940 HYPKQ9NX55 129 aa6.87□□□□□ -1.31
CDC42BPA-209ENST00000448940 POLR3AO14802 1390 aaPredicted RBP6.87□□□□□ -1.31
CDC42BPA-209ENST00000448940 PPP1R12BO60237 982 aaPredicted RBP6.87□□□□□ -1.31
CDC42BPA-209ENST00000448940 ATF7IPQ6VMQ6 1270 aa6.87□□□□□ -1.31
CDC42BPA-209ENST00000448940 VSIG10Q8N0Z9 540 aa6.87□□□□□ -1.31
CDC42BPA-209ENST00000448940 TRIM6-TRIM34B2RNG4 842 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms