RNA–Protein interactions for RNA: ENST00000448911.1

OPTC-202, Transcript of opticin, humanhuman

TSL 2

Gene OPTC, Length 560 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OPTC-202ENST00000448911 LGR6Q9HBX8 967 aa12.56□□□□□ -0.4
OPTC-202ENST00000448911 SENP3-EIF4A1A0A087X0R7 540 aa12.55□□□□□ -0.4
OPTC-202ENST00000448911 CABP4P57796 275 aa12.55□□□□□ -0.4
OPTC-202ENST00000448911 TAF7Q15545 349 aaPredicted RBP12.55□□□□□ -0.4
OPTC-202ENST00000448911 CFAP44Q96MT7 982 aa12.55□□□□□ -0.4
OPTC-202ENST00000448911 TMOD3Q9NYL9 352 aa12.55□□□□□ -0.4
OPTC-202ENST00000448911 UBR2Q8IWV8 1755 aa12.55□□□□□ -0.4
OPTC-202ENST00000448911 KAT6BQ8WYB5 2073 aa12.55□□□□□ -0.4
OPTC-202ENST00000448911 BTAF1O14981 1849 aa12.54□□□□□ -0.4
OPTC-202ENST00000448911 ZNF853P0CG23 659 aa12.54□□□□□ -0.4
OPTC-202ENST00000448911 MYH16Q9H6N6 1097 aa12.54□□□□□ -0.4
OPTC-202ENST00000448911 CICQ96RK0 1608 aaPredicted RBP12.52□□□□□ -0.4
OPTC-202ENST00000448911 BTBD11A6QL63 1104 aa12.52□□□□□ -0.41
OPTC-202ENST00000448911 CHL1O00533 1208 aa12.52□□□□□ -0.41
OPTC-202ENST00000448911 SLFN5Q08AF3 891 aa12.52□□□□□ -0.41
OPTC-202ENST00000448911 NFATC2IPQ8NCF5 419 aa12.52□□□□□ -0.41
OPTC-202ENST00000448911 TSPYL4Q9UJ04 414 aa12.52□□□□□ -0.41
OPTC-202ENST00000448911 FANCIQ9NVI1 1328 aa12.52□□□□□ -0.41
OPTC-202ENST00000448911 TNS1Q9HBL0 1735 aaKnown RBP12.51□□□□□ -0.41
OPTC-202ENST00000448911 RGPD3A6NKT7 1758 aaPredicted RBP12.51□□□□□ -0.41
OPTC-202ENST00000448911 RGPD4Q7Z3J3 1758 aa12.51□□□□□ -0.41
OPTC-202ENST00000448911 PRIM1P49642 420 aaKnown RBP12.51□□□□□ -0.41
OPTC-202ENST00000448911 TRMT2AQ8IZ69 625 aaKnown RBP12.51□□□□□ -0.41
OPTC-202ENST00000448911 PIGBQ92521 554 aa12.51□□□□□ -0.41
OPTC-202ENST00000448911 SYTL4Q96C24 671 aaPredicted RBP12.51□□□□□ -0.41
OPTC-202ENST00000448911 MBIPQ9NS73 344 aa12.51□□□□□ -0.41
OPTC-202ENST00000448911 KCPQ6ZWJ8 1503 aa12.51□□□□□ -0.41
OPTC-202ENST00000448911 ZNF831Q5JPB2 1677 aa12.51□□□□□ -0.41
OPTC-202ENST00000448911 FAM182BQ5T319 152 aa12.5□□□□□ -0.41
OPTC-202ENST00000448911 ZNF790Q6PG37 636 aa12.5□□□□□ -0.41
OPTC-202ENST00000448911 ACSBG1Q96GR2 724 aa12.5□□□□□ -0.41
OPTC-202ENST00000448911 BCL11BQ9C0K0 894 aaPredicted RBP12.5□□□□□ -0.41
OPTC-202ENST00000448911 SPINK5Q9NQ38 1064 aaPredicted RBP12.5□□□□□ -0.41
OPTC-202ENST00000448911 LAMB4A4D0S4 1761 aa12.49□□□□□ -0.41
OPTC-202ENST00000448911 SOS1Q07889 1333 aaPredicted RBP12.49□□□□□ -0.41
OPTC-202ENST00000448911 DUSP27Q5VZP5 1158 aa12.49□□□□□ -0.41
OPTC-202ENST00000448911 TTC5Q8N0Z6 440 aa12.49□□□□□ -0.41
OPTC-202ENST00000448911 SMARCC1Q92922 1105 aaPredicted RBP12.49□□□□□ -0.41
OPTC-202ENST00000448911 LAS1LQ9Y4W2 734 aaKnown RBP12.49□□□□□ -0.41
OPTC-202ENST00000448911 LY75O60449 1722 aa12.48□□□□□ -0.41
OPTC-202ENST00000448911 KCNQ2O43526 872 aa12.48□□□□□ -0.41
OPTC-202ENST00000448911 TSR2Q969E8 191 aaKnown RBP12.48□□□□□ -0.41
OPTC-202ENST00000448911 CDCA7LQ96GN5 454 aa12.48□□□□□ -0.41
OPTC-202ENST00000448911 PALLDQ8WX93 1383 aa12.47□□□□□ -0.41
OPTC-202ENST00000448911 HEG1Q9ULI3 1381 aa12.47□□□□□ -0.41
OPTC-202ENST00000448911 HOXB7P09629 217 aa12.47□□□□□ -0.41
OPTC-202ENST00000448911 CT47B1P0C2W7 299 aaPredicted RBP12.47□□□□□ -0.41
OPTC-202ENST00000448911 FMNL2Q96PY5 1086 aa12.47□□□□□ -0.41
OPTC-202ENST00000448911 C5P01031 1676 aa12.46□□□□□ -0.41
OPTC-202ENST00000448911 EIF4A1P60842 406 aaKnown RBP12.46□□□□□ -0.41
OPTC-202ENST00000448911 SLC39A6Q13433 755 aa12.46□□□□□ -0.41
OPTC-202ENST00000448911 VSIG10Q8N0Z9 540 aa12.46□□□□□ -0.41
OPTC-202ENST00000448911 ATG3Q9NT62 314 aa12.46□□□□□ -0.41
OPTC-202ENST00000448911 MIS18AQ9NYP9 233 aa12.46□□□□□ -0.41
OPTC-202ENST00000448911 ASAP1Q9ULH1 1129 aa12.46□□□□□ -0.41
OPTC-202ENST00000448911 TJP1Q07157 1748 aa12.45□□□□□ -0.42
OPTC-202ENST00000448911 TRIM37O94972 964 aa12.45□□□□□ -0.42
OPTC-202ENST00000448911 CHMP4AQ9BY43 222 aa12.45□□□□□ -0.42
OPTC-202ENST00000448911 KCNQ3O43525 872 aa12.44□□□□□ -0.42
OPTC-202ENST00000448911 ZNF428Q96B54 188 aa12.44□□□□□ -0.42
OPTC-202ENST00000448911 ZNF496Q96IT1 587 aaPredicted RBP12.44□□□□□ -0.42
OPTC-202ENST00000448911 COL5A3P25940 1745 aaPredicted RBP12.44□□□□□ -0.42
OPTC-202ENST00000448911 LOC102724428A0A0B4J2F2 783 aa12.43□□□□□ -0.42
OPTC-202ENST00000448911 SNRPA1P09661 255 aaKnown RBP12.43□□□□□ -0.42
OPTC-202ENST00000448911 HMGB2P26583 209 aaKnown RBP12.43□□□□□ -0.42
OPTC-202ENST00000448911 SIK1P57059 783 aa12.43□□□□□ -0.42
OPTC-202ENST00000448911 EXOSC9Q06265 439 aaKnown RBP12.43□□□□□ -0.42
OPTC-202ENST00000448911 PTF1AQ7RTS3 328 aa12.43□□□□□ -0.42
OPTC-202ENST00000448911 CACNA1FO60840 1977 aa12.43□□□□□ -0.42
OPTC-202ENST00000448911 PLSCR1O15162 318 aa12.42□□□□□ -0.42
OPTC-202ENST00000448911 PTCD1O75127 700 aaKnown RBP12.42□□□□□ -0.42
OPTC-202ENST00000448911 GIGYF1O75420 1035 aaPredicted RBP12.42□□□□□ -0.42
OPTC-202ENST00000448911 TWISTNBQ3B726 338 aaPredicted RBP12.42□□□□□ -0.42
OPTC-202ENST00000448911 CCDC125Q86Z20 511 aa12.42□□□□□ -0.42
OPTC-202ENST00000448911 TEX13AQ9BXU3 409 aaPredicted RBP12.42□□□□□ -0.42
OPTC-202ENST00000448911 RREB1Q92766 1687 aa12.42□□□□□ -0.42
OPTC-202ENST00000448911 TAF1LQ8IZX4 1826 aa12.41□□□□□ -0.42
OPTC-202ENST00000448911 SLC27A3Q5K4L6 730 aa12.41□□□□□ -0.42
OPTC-202ENST00000448911 C8orf58Q8NAV2 365 aa12.41□□□□□ -0.42
OPTC-202ENST00000448911 RBM42Q9BTD8 480 aaKnown RBP12.41□□□□□ -0.42
OPTC-202ENST00000448911 ERBB4Q15303 1308 aa12.4□□□□□ -0.42
OPTC-202ENST00000448911 CENPBP07199 599 aaPredicted RBP12.4□□□□□ -0.42
OPTC-202ENST00000448911 SF3B2Q13435 895 aaKnown RBP12.4□□□□□ -0.42
OPTC-202ENST00000448911 KRT24Q2M2I5 525 aa12.4□□□□□ -0.42
OPTC-202ENST00000448911 TSPYL6Q8N831 410 aa12.4□□□□□ -0.42
OPTC-202ENST00000448911 VAMP4O75379 141 aa12.39□□□□□ -0.43
OPTC-202ENST00000448911 STARD3NLO95772 234 aa12.39□□□□□ -0.43
OPTC-202ENST00000448911 APBA3O96018 575 aa12.39□□□□□ -0.43
OPTC-202ENST00000448911 ALDH1L2Q3SY69 923 aa12.39□□□□□ -0.43
OPTC-202ENST00000448911 HDGFL1Q5TGJ6 251 aa12.39□□□□□ -0.43
OPTC-202ENST00000448911 SLC4A9Q96Q91 983 aa12.39□□□□□ -0.43
OPTC-202ENST00000448911 CCNL1Q9UK58 526 aaPredicted RBP12.39□□□□□ -0.43
OPTC-202ENST00000448911 C4BP0C0L5 1744 aa12.38□□□□□ -0.43
OPTC-202ENST00000448911 ATP6V1AP38606 617 aa12.38□□□□□ -0.43
OPTC-202ENST00000448911 BAG6P46379 1132 aa12.38□□□□□ -0.43
OPTC-202ENST00000448911 CCDC30Q5VVM6 783 aa12.38□□□□□ -0.43
OPTC-202ENST00000448911 CNTNAP4Q9C0A0 1308 aa12.37□□□□□ -0.43
OPTC-202ENST00000448911 ELL2O00472 640 aaPredicted RBP12.37□□□□□ -0.43
OPTC-202ENST00000448911 DNAJC10Q8IXB1 793 aa12.37□□□□□ -0.43
OPTC-202ENST00000448911 STK31Q9BXU1 1019 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms