RNA–Protein interactions for RNA: ENST00000448472.5

CHRD-205, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 3,547 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-205ENST00000448472 PDLIM2Q96JY6 352 aa19.12■□□□□ 0.65
CHRD-205ENST00000448472 ZC3H13Q5T200 1668 aaKnown RBP19.11■□□□□ 0.65
CHRD-205ENST00000448472 IFT172Q9UG01 1749 aa19.11■□□□□ 0.65
CHRD-205ENST00000448472 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.11■□□□□ 0.65
CHRD-205ENST00000448472 LRRFIP2Q9Y608 721 aaKnown RBP19.11■□□□□ 0.65
CHRD-205ENST00000448472 ABCC3O15438 1527 aa19.11■□□□□ 0.65
CHRD-205ENST00000448472 USP32Q8NFA0 1604 aa19.11■□□□□ 0.65
CHRD-205ENST00000448472 CHL1O00533 1208 aa19.11■□□□□ 0.65
CHRD-205ENST00000448472 KCNJ4P48050 445 aa19.11■□□□□ 0.65
CHRD-205ENST00000448472 AMPHP49418 695 aa19.11■□□□□ 0.65
CHRD-205ENST00000448472 SPC24Q8NBT2 197 aa19.11■□□□□ 0.65
CHRD-205ENST00000448472 PNMA6EA0A0J9YXQ4 647 aa19.11■□□□□ 0.65
CHRD-205ENST00000448472 BRD1O95696 1058 aa19.11■□□□□ 0.65
CHRD-205ENST00000448472 EIF2S2P20042 333 aaKnown RBP19.11■□□□□ 0.65
CHRD-205ENST00000448472 BCL11BQ9C0K0 894 aaPredicted RBP19.11■□□□□ 0.65
CHRD-205ENST00000448472 CNPY2Q9Y2B0 182 aa19.11■□□□□ 0.65
CHRD-205ENST00000448472 WDR33Q9C0J8 1336 aaKnown RBP19.1■□□□□ 0.65
CHRD-205ENST00000448472 CD163L1Q9NR16 1453 aa19.1■□□□□ 0.65
CHRD-205ENST00000448472 VPS37CA5D8V6 355 aaPredicted RBP19.1■□□□□ 0.65
CHRD-205ENST00000448472 CHMLP26374 656 aa19.09■□□□□ 0.65
CHRD-205ENST00000448472 SMC3Q9UQE7 1217 aa19.09■□□□□ 0.65
CHRD-205ENST00000448472 ABCA9Q8IUA7 1624 aa19.09■□□□□ 0.65
CHRD-205ENST00000448472 GNAI3P08754 354 aa19.09■□□□□ 0.65
CHRD-205ENST00000448472 UNC5CLQ8IV45 518 aa19.09■□□□□ 0.65
CHRD-205ENST00000448472 LMTK2Q8IWU2 1503 aa19.09■□□□□ 0.65
CHRD-205ENST00000448472 ADCY5O95622 1261 aa19.08■□□□□ 0.65
CHRD-205ENST00000448472 UBTFL1P0CB47 393 aaPredicted RBP19.08■□□□□ 0.65
CHRD-205ENST00000448472 ARHGEF28Q8N1W1 1705 aaKnown RBP19.08■□□□□ 0.65
CHRD-205ENST00000448472 NUTM2GQ5VZR2 741 aa19.08■□□□□ 0.64
CHRD-205ENST00000448472 CPA1P15085 419 aa19.08■□□□□ 0.64
CHRD-205ENST00000448472 CWC27Q6UX04 472 aaKnown RBP19.08■□□□□ 0.64
CHRD-205ENST00000448472 DYNC1I1O14576 645 aa19.07■□□□□ 0.64
CHRD-205ENST00000448472 MCM5P33992 734 aa19.07■□□□□ 0.64
CHRD-205ENST00000448472 FLIIQ13045 1269 aa19.07■□□□□ 0.64
CHRD-205ENST00000448472 NEXMIFQ5QGS0 1516 aa19.07■□□□□ 0.64
CHRD-205ENST00000448472 PTPRMP28827 1452 aa19.07■□□□□ 0.64
CHRD-205ENST00000448472 SPG7Q9UQ90 795 aa19.07■□□□□ 0.64
CHRD-205ENST00000448472 GIMAP6Q6P9H5 292 aa19.06■□□□□ 0.64
CHRD-205ENST00000448472 DRC7Q8IY82 874 aa19.06■□□□□ 0.64
CHRD-205ENST00000448472 ATP10DQ9P241 1426 aa19.06■□□□□ 0.64
CHRD-205ENST00000448472 SRCIN1Q9C0H9 1055 aa19.05■□□□□ 0.64
CHRD-205ENST00000448472 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.05■□□□□ 0.64
CHRD-205ENST00000448472 MTHFSDQ2M296 383 aaKnown RBP19.05■□□□□ 0.64
CHRD-205ENST00000448472 CHAF1AQ13111 956 aaPredicted RBP19.04■□□□□ 0.64
CHRD-205ENST00000448472 CCDC30Q5VVM6 783 aa19.04■□□□□ 0.64
CHRD-205ENST00000448472 GOLGA6L4A6NEF3 574 aa19.03■□□□□ 0.64
CHRD-205ENST00000448472 TERF1P54274 439 aa19.03■□□□□ 0.64
CHRD-205ENST00000448472 NOLC1Q14978 699 aaKnown RBP eCLIP19.03■□□□□ 0.64
CHRD-205ENST00000448472 CCDC83Q8IWF9 413 aa19.03■□□□□ 0.64
CHRD-205ENST00000448472 NGDNQ8NEJ9 315 aaKnown RBP19.03■□□□□ 0.64
CHRD-205ENST00000448472 ZHX1Q9UKY1 873 aaPredicted RBP19.03■□□□□ 0.64
CHRD-205ENST00000448472 CBX1P83916 185 aa19.03■□□□□ 0.64
CHRD-205ENST00000448472 CCDC183Q5T5S1 534 aa19.03■□□□□ 0.64
CHRD-205ENST00000448472 DIAPH3Q9NSV4 1193 aa19.03■□□□□ 0.64
CHRD-205ENST00000448472 FERMT3Q86UX7 667 aa19.02■□□□□ 0.64
CHRD-205ENST00000448472 KIF24Q5T7B8 1368 aa19.02■□□□□ 0.64
CHRD-205ENST00000448472 SRGAP3O43295 1099 aa19.02■□□□□ 0.64
CHRD-205ENST00000448472 CASTP20810 708 aaKnown RBP19.02■□□□□ 0.64
CHRD-205ENST00000448472 EDC4Q6P2E9 1401 aaKnown RBP19.02■□□□□ 0.63
CHRD-205ENST00000448472 INTS4Q96HW7 963 aaKnown RBP19.01■□□□□ 0.63
CHRD-205ENST00000448472 MLH3Q9UHC1 1453 aa19.01■□□□□ 0.63
CHRD-205ENST00000448472 MTERF4Q7Z6M4 381 aaKnown RBP19.01■□□□□ 0.63
CHRD-205ENST00000448472 STX6O43752 255 aa19■□□□□ 0.63
CHRD-205ENST00000448472 ATP8B2P98198 1209 aa19■□□□□ 0.63
CHRD-205ENST00000448472 YEATS2Q9ULM3 1422 aa19■□□□□ 0.63
CHRD-205ENST00000448472 CAMK4Q16566 473 aa19■□□□□ 0.63
CHRD-205ENST00000448472 FAM184AQ8NB25 1140 aa19■□□□□ 0.63
CHRD-205ENST00000448472 ZSCAN21Q9Y5A6 473 aaPredicted RBP19■□□□□ 0.63
CHRD-205ENST00000448472 ATP6V1DQ9Y5K8 247 aa19■□□□□ 0.63
CHRD-205ENST00000448472 ACEP12821 1306 aa19■□□□□ 0.63
CHRD-205ENST00000448472 CUL4AQ13619 759 aa19■□□□□ 0.63
CHRD-205ENST00000448472 AK2P54819 239 aa18.99■□□□□ 0.63
CHRD-205ENST00000448472 ANAPC15P60006 121 aa18.99■□□□□ 0.63
CHRD-205ENST00000448472 HDGFL1Q5TGJ6 251 aa18.99■□□□□ 0.63
CHRD-205ENST00000448472 IL25Q9H293 177 aa18.99■□□□□ 0.63
CHRD-205ENST00000448472 OSBPL3Q9H4L5 887 aa18.99■□□□□ 0.63
CHRD-205ENST00000448472 PPP1R42Q7Z4L9 355 aa18.99■□□□□ 0.63
CHRD-205ENST00000448472 ZSCAN22P10073 491 aaPredicted RBP18.99■□□□□ 0.63
CHRD-205ENST00000448472 SYT1P21579 422 aa18.99■□□□□ 0.63
CHRD-205ENST00000448472 DNM1Q05193 864 aaKnown RBP18.99■□□□□ 0.63
CHRD-205ENST00000448472 JAKMIP1Q96N16 626 aaKnown RBP18.99■□□□□ 0.63
CHRD-205ENST00000448472 ARHGEF40Q8TER5 1519 aa18.99■□□□□ 0.63
CHRD-205ENST00000448472 TTC21BQ7Z4L5 1316 aa18.98■□□□□ 0.63
CHRD-205ENST00000448472 CNTROBQ8N137 903 aa18.98■□□□□ 0.63
CHRD-205ENST00000448472 MAP2P11137 1827 aaKnown RBP18.98■□□□□ 0.63
CHRD-205ENST00000448472 MAP3K19Q56UN5 1328 aa18.97■□□□□ 0.63
CHRD-205ENST00000448472 HMGN5P82970 282 aaKnown RBP18.97■□□□□ 0.63
CHRD-205ENST00000448472 KIF3AQ9Y496 699 aa18.97■□□□□ 0.63
CHRD-205ENST00000448472 FRMPD1Q5SYB0 1578 aa18.97■□□□□ 0.63
CHRD-205ENST00000448472 ANXA1P04083 346 aa18.97■□□□□ 0.63
CHRD-205ENST00000448472 NECAB1Q8N987 351 aa18.97■□□□□ 0.63
CHRD-205ENST00000448472 LIMCH1Q9UPQ0 1083 aa18.97■□□□□ 0.63
CHRD-205ENST00000448472 PRPF40BQ6NWY9 871 aaKnown RBP18.96■□□□□ 0.63
CHRD-205ENST00000448472 SPDYE4A6NLX3 237 aa18.96■□□□□ 0.63
CHRD-205ENST00000448472 PHAXQ9H814 394 aaKnown RBP18.96■□□□□ 0.63
CHRD-205ENST00000448472 GJB2P29033 226 aa18.96■□□□□ 0.63
CHRD-205ENST00000448472 UBE2HP62256 183 aa18.96■□□□□ 0.63
CHRD-205ENST00000448472 HECW2Q9P2P5 1572 aa18.96■□□□□ 0.63
CHRD-205ENST00000448472 FAM173BQ6P4H8 233 aa18.95■□□□□ 0.62
CHRD-205ENST00000448472 RASEFQ8IZ41 740 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms