RNA–Protein interactions for RNA: ENST00000448276.6

SMARCD2-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD2, Length 2,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-203ENST00000448276 MYRIPQ8NFW9 859 aa24.83■■□□□ 1.56
SMARCD2-203ENST00000448276 SMAP1Q8IYB5 467 aaPredicted RBP24.81■■□□□ 1.56
SMARCD2-203ENST00000448276 MYO5BQ9ULV0 1848 aa24.81■■□□□ 1.56
SMARCD2-203ENST00000448276 PLCB2Q00722 1185 aa24.81■■□□□ 1.56
SMARCD2-203ENST00000448276 NOLC1Q14978 699 aaKnown RBP eCLIP24.81■■□□□ 1.56
SMARCD2-203ENST00000448276 SULT6B1Q6IMI4 303 aa24.81■■□□□ 1.56
SMARCD2-203ENST00000448276 MTERF4Q7Z6M4 381 aaKnown RBP24.81■■□□□ 1.56
SMARCD2-203ENST00000448276 UNC5CLQ8IV45 518 aa24.81■■□□□ 1.56
SMARCD2-203ENST00000448276 SYAP1Q96A49 352 aaPredicted RBP24.81■■□□□ 1.56
SMARCD2-203ENST00000448276 IL25Q9H293 177 aa24.81■■□□□ 1.56
SMARCD2-203ENST00000448276 ADCY5O95622 1261 aa24.8■■□□□ 1.56
SMARCD2-203ENST00000448276 HCLS1P14317 486 aaPredicted RBP24.8■■□□□ 1.56
SMARCD2-203ENST00000448276 CCDC94Q9BW85 323 aaPredicted RBP24.8■■□□□ 1.56
SMARCD2-203ENST00000448276 TSPOAP1O95153 1857 aa24.8■■□□□ 1.56
SMARCD2-203ENST00000448276 CNPY2Q9Y2B0 182 aa24.79■■□□□ 1.56
SMARCD2-203ENST00000448276 CLTCQ00610 1675 aaKnown RBP24.78■■□□□ 1.56
SMARCD2-203ENST00000448276 OSBPL3Q9H4L5 887 aa24.78■■□□□ 1.56
SMARCD2-203ENST00000448276 CHL1O00533 1208 aa24.78■■□□□ 1.56
SMARCD2-203ENST00000448276 HMMRO75330 724 aa24.78■■□□□ 1.56
SMARCD2-203ENST00000448276 CHMLP26374 656 aa24.78■■□□□ 1.56
SMARCD2-203ENST00000448276 CBX1P83916 185 aa24.77■■□□□ 1.56
SMARCD2-203ENST00000448276 PIBF1Q8WXW3 757 aa24.77■■□□□ 1.56
SMARCD2-203ENST00000448276 SRCIN1Q9C0H9 1055 aa24.77■■□□□ 1.56
SMARCD2-203ENST00000448276 MCM2P49736 904 aa24.77■■□□□ 1.56
SMARCD2-203ENST00000448276 MCCP23508 829 aa24.77■■□□□ 1.56
SMARCD2-203ENST00000448276 COG3Q96JB2 828 aa24.77■■□□□ 1.56
SMARCD2-203ENST00000448276 MAP4K4O95819 1239 aaPredicted RBP24.75■■□□□ 1.55
SMARCD2-203ENST00000448276 MX1P20591 662 aa24.75■■□□□ 1.55
SMARCD2-203ENST00000448276 INTS4Q96HW7 963 aaKnown RBP24.75■■□□□ 1.55
SMARCD2-203ENST00000448276 PNMA6EA0A0J9YXQ4 647 aa24.75■■□□□ 1.55
SMARCD2-203ENST00000448276 PREX1Q8TCU6 1659 aa24.75■■□□□ 1.55
SMARCD2-203ENST00000448276 PTPRCP08575 1304 aa24.74■■□□□ 1.55
SMARCD2-203ENST00000448276 CPSF1Q10570 1443 aaKnown RBP24.74■■□□□ 1.55
SMARCD2-203ENST00000448276 RIMBP3CA6NJZ7 1639 aa24.74■■□□□ 1.55
SMARCD2-203ENST00000448276 RIMBP3BA6NNM3 1639 aa24.74■■□□□ 1.55
SMARCD2-203ENST00000448276 RIMBP3Q9UFD9 1639 aa24.74■■□□□ 1.55
SMARCD2-203ENST00000448276 PHF14O94880 888 aa24.73■■□□□ 1.55
SMARCD2-203ENST00000448276 CDK12Q9NYV4 1490 aaPredicted RBP24.73■■□□□ 1.55
SMARCD2-203ENST00000448276 LRRCC1Q9C099 1032 aa24.73■■□□□ 1.55
SMARCD2-203ENST00000448276 TMEM131LA2VDJ0 1609 aa24.73■■□□□ 1.55
SMARCD2-203ENST00000448276 EIF4A2Q14240 407 aaKnown RBP24.72■■□□□ 1.55
SMARCD2-203ENST00000448276 NECTIN2Q92692 538 aa24.72■■□□□ 1.55
SMARCD2-203ENST00000448276 SALL3Q9BXA9 1300 aa24.72■■□□□ 1.55
SMARCD2-203ENST00000448276 TCHHQ07283 1943 aa24.72■■□□□ 1.55
SMARCD2-203ENST00000448276 FOXO3O43524 673 aa24.72■■□□□ 1.55
SMARCD2-203ENST00000448276 SOX12O15370 315 aa24.71■■□□□ 1.55
SMARCD2-203ENST00000448276 ATP2B3Q16720 1220 aa24.71■■□□□ 1.55
SMARCD2-203ENST00000448276 WDR33Q9C0J8 1336 aaKnown RBP24.71■■□□□ 1.55
SMARCD2-203ENST00000448276 AP5Z1O43299 807 aa24.71■■□□□ 1.55
SMARCD2-203ENST00000448276 ZSCAN20P17040 1043 aaPredicted RBP24.7■■□□□ 1.55
SMARCD2-203ENST00000448276 PPP4R3BQ5MIZ7 849 aa24.7■■□□□ 1.55
SMARCD2-203ENST00000448276 CCDC183Q5T5S1 534 aa24.7■■□□□ 1.55
SMARCD2-203ENST00000448276 GIMAP6Q6P9H5 292 aa24.7■■□□□ 1.55
SMARCD2-203ENST00000448276 IL1RAPL2Q9NP60 686 aa24.7■■□□□ 1.55
SMARCD2-203ENST00000448276 RPAP1Q9BWH6 1393 aaPredicted RBP24.7■■□□□ 1.55
SMARCD2-203ENST00000448276 ALKQ9UM73 1620 aa24.7■■□□□ 1.55
SMARCD2-203ENST00000448276 FIBPO43427 364 aa24.7■■□□□ 1.54
SMARCD2-203ENST00000448276 GNAI2P04899 355 aa24.7■■□□□ 1.54
SMARCD2-203ENST00000448276 PRIMPOLQ96LW4 560 aa24.69■■□□□ 1.54
SMARCD2-203ENST00000448276 DIP2BQ9P265 1576 aa24.69■■□□□ 1.54
SMARCD2-203ENST00000448276 CPS1P31327 1500 aa24.68■■□□□ 1.54
SMARCD2-203ENST00000448276 ATP7BP35670 1465 aa24.68■■□□□ 1.54
SMARCD2-203ENST00000448276 SPDYE4A6NLX3 237 aa24.68■■□□□ 1.54
SMARCD2-203ENST00000448276 ANAPC15P60006 121 aa24.68■■□□□ 1.54
SMARCD2-203ENST00000448276 UVSSAQ2YD98 709 aa24.68■■□□□ 1.54
SMARCD2-203ENST00000448276 SPC24Q8NBT2 197 aa24.68■■□□□ 1.54
SMARCD2-203ENST00000448276 NUTM1Q86Y26 1132 aa24.68■■□□□ 1.54
SMARCD2-203ENST00000448276 FAM184AQ8NB25 1140 aa24.68■■□□□ 1.54
SMARCD2-203ENST00000448276 KIAA0232Q92628 1395 aa24.67■■□□□ 1.54
SMARCD2-203ENST00000448276 CPA1P15085 419 aa24.67■■□□□ 1.54
SMARCD2-203ENST00000448276 BCL2L12Q9HB09 334 aa24.67■■□□□ 1.54
SMARCD2-203ENST00000448276 PYCARDQ9ULZ3 195 aa24.67■■□□□ 1.54
SMARCD2-203ENST00000448276 EDC4Q6P2E9 1401 aaKnown RBP24.67■■□□□ 1.54
SMARCD2-203ENST00000448276 HMGN5P82970 282 aaKnown RBP24.67■■□□□ 1.54
SMARCD2-203ENST00000448276 DMTNQ08495 405 aa24.67■■□□□ 1.54
SMARCD2-203ENST00000448276 KIF3AQ9Y496 699 aa24.67■■□□□ 1.54
SMARCD2-203ENST00000448276 KDM4AO75164 1064 aa24.66■■□□□ 1.54
SMARCD2-203ENST00000448276 WASLO00401 505 aaPredicted RBP24.65■■□□□ 1.54
SMARCD2-203ENST00000448276 HAP1P54257 671 aaPredicted RBP24.65■■□□□ 1.54
SMARCD2-203ENST00000448276 FKBP5Q13451 457 aaPredicted RBP24.65■■□□□ 1.54
SMARCD2-203ENST00000448276 CCT4P50991 539 aaKnown RBP24.65■■□□□ 1.54
SMARCD2-203ENST00000448276 HSP90AB2PQ58FF8 381 aa24.65■■□□□ 1.54
SMARCD2-203ENST00000448276 NUDT16Q96DE0 195 aaKnown RBP24.65■■□□□ 1.54
SMARCD2-203ENST00000448276 KCNF1Q9H3M0 494 aa24.65■■□□□ 1.54
SMARCD2-203ENST00000448276 AATKQ6ZMQ8 1374 aa24.65■■□□□ 1.54
SMARCD2-203ENST00000448276 TXNDC2Q86VQ3 553 aa24.64■■□□□ 1.54
SMARCD2-203ENST00000448276 TSPYL4Q9UJ04 414 aa24.64■■□□□ 1.54
SMARCD2-203ENST00000448276 ZSCAN22P10073 491 aaPredicted RBP24.64■■□□□ 1.53
SMARCD2-203ENST00000448276 SYT1P21579 422 aa24.63■■□□□ 1.53
SMARCD2-203ENST00000448276 GTF2F1P35269 517 aaKnown RBP eCLIP24.63■■□□□ 1.538e-10■■■□□ 15
SMARCD2-203ENST00000448276 SPTLC3Q9NUV7 552 aa24.63■■□□□ 1.53
SMARCD2-203ENST00000448276 LRRFIP2Q9Y608 721 aaKnown RBP24.63■■□□□ 1.53
SMARCD2-203ENST00000448276 ESF1Q9H501 851 aaKnown RBP24.63■■□□□ 1.53
SMARCD2-203ENST00000448276 HSPA4P34932 840 aa24.62■■□□□ 1.53
SMARCD2-203ENST00000448276 AK2P54819 239 aa24.62■■□□□ 1.53
SMARCD2-203ENST00000448276 RASEFQ8IZ41 740 aa24.62■■□□□ 1.53
SMARCD2-203ENST00000448276 STX6O43752 255 aa24.62■■□□□ 1.53
SMARCD2-203ENST00000448276 LARGE1O95461 756 aa24.61■■□□□ 1.53
SMARCD2-203ENST00000448276 TMEM87AQ8NBN3 555 aa24.61■■□□□ 1.53
SMARCD2-203ENST00000448276 RIOK3O14730 519 aaKnown RBP24.61■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms