RNA–Protein interactions for RNA: ENST00000448152.2

GAPDHP16-201, Transcript of glyceraldehyde-3-phosphate dehydrogenase pseudogene 16, humanhuman

BASIC

Gene GAPDHP16, Length 962 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP16-201ENST00000448152 KDM4AO75164 1064 aa9.73□□□□□ -0.85
GAPDHP16-201ENST00000448152 ANKLE1Q8NAG6 615 aa9.73□□□□□ -0.85
GAPDHP16-201ENST00000448152 KTN1Q86UP2 1357 aaKnown RBP9.73□□□□□ -0.85
GAPDHP16-201ENST00000448152 ITGAEP38570 1179 aa9.72□□□□□ -0.85
GAPDHP16-201ENST00000448152 ANP32AP39687 249 aaKnown RBP9.72□□□□□ -0.85
GAPDHP16-201ENST00000448152 LRRC59Q96AG4 307 aaKnown RBP9.72□□□□□ -0.85
GAPDHP16-201ENST00000448152 NOS1P29475 1434 aa9.72□□□□□ -0.85
GAPDHP16-201ENST00000448152 DCCP43146 1447 aa9.72□□□□□ -0.85
GAPDHP16-201ENST00000448152 MYO5BQ9ULV0 1848 aa9.71□□□□□ -0.85
GAPDHP16-201ENST00000448152 S1PR4O95977 384 aa9.71□□□□□ -0.86
GAPDHP16-201ENST00000448152 NUTM1Q86Y26 1132 aa9.71□□□□□ -0.86
GAPDHP16-201ENST00000448152 SIN3AQ96ST3 1273 aa9.71□□□□□ -0.86
GAPDHP16-201ENST00000448152 FAM217BQ9NTX9 383 aaPredicted RBP9.71□□□□□ -0.86
GAPDHP16-201ENST00000448152 NOP58Q9Y2X3 529 aaKnown RBP9.71□□□□□ -0.86
GAPDHP16-201ENST00000448152 ATRNO75882 1429 aa9.71□□□□□ -0.86
GAPDHP16-201ENST00000448152 LMTK2Q8IWU2 1503 aa9.71□□□□□ -0.86
GAPDHP16-201ENST00000448152 PTPN23Q9H3S7 1636 aa9.71□□□□□ -0.86
GAPDHP16-201ENST00000448152 RNF223E7ERA6 249 aa9.7□□□□□ -0.86
GAPDHP16-201ENST00000448152 ADAMTS2O95450 1211 aa9.7□□□□□ -0.86
GAPDHP16-201ENST00000448152 AMHR2Q16671 573 aa9.7□□□□□ -0.86
GAPDHP16-201ENST00000448152 RTL5Q5HYW3 569 aaPredicted RBP9.7□□□□□ -0.86
GAPDHP16-201ENST00000448152 USP21Q9UK80 565 aa9.7□□□□□ -0.86
GAPDHP16-201ENST00000448152 TRPC5Q9UL62 973 aaPredicted RBP9.7□□□□□ -0.86
GAPDHP16-201ENST00000448152 TBX22Q9Y458 520 aa9.7□□□□□ -0.86
GAPDHP16-201ENST00000448152 MST1RQ04912 1400 aa9.7□□□□□ -0.86
GAPDHP16-201ENST00000448152 MYOM3Q5VTT5 1437 aa9.7□□□□□ -0.86
GAPDHP16-201ENST00000448152 ERBINQ96RT1 1412 aa9.7□□□□□ -0.86
GAPDHP16-201ENST00000448152 BLMP54132 1417 aaPredicted RBP9.69□□□□□ -0.86
GAPDHP16-201ENST00000448152 ADAMTS13Q76LX8 1427 aa9.69□□□□□ -0.86
GAPDHP16-201ENST00000448152 AK7Q96M32 723 aa9.69□□□□□ -0.86
GAPDHP16-201ENST00000448152 RIMS2Q9UQ26 1411 aa9.69□□□□□ -0.86
GAPDHP16-201ENST00000448152 SLC27A5Q9Y2P5 690 aa9.69□□□□□ -0.86
GAPDHP16-201ENST00000448152 GCC2Q8IWJ2 1684 aa9.68□□□□□ -0.86
GAPDHP16-201ENST00000448152 NAIPQ13075 1403 aa9.68□□□□□ -0.86
GAPDHP16-201ENST00000448152 SMG6Q86US8 1419 aaKnown RBP9.68□□□□□ -0.86
GAPDHP16-201ENST00000448152 ROCK2O75116 1388 aaKnown RBP9.68□□□□□ -0.86
GAPDHP16-201ENST00000448152 PIK3R4Q99570 1358 aa9.68□□□□□ -0.86
GAPDHP16-201ENST00000448152 DDX17Q92841 729 aaKnown RBP9.68□□□□□ -0.86
GAPDHP16-201ENST00000448152 KANK1Q14678 1352 aa9.67□□□□□ -0.86
GAPDHP16-201ENST00000448152 KIF15Q9NS87 1388 aa9.67□□□□□ -0.86
GAPDHP16-201ENST00000448152 RNF123Q5XPI4 1314 aa9.67□□□□□ -0.86
GAPDHP16-201ENST00000448152 DEFB132Q7Z7B7 95 aa9.67□□□□□ -0.86
GAPDHP16-201ENST00000448152 FNBP4Q8N3X1 1017 aaPredicted RBP9.67□□□□□ -0.86
GAPDHP16-201ENST00000448152 TMEM131LA2VDJ0 1609 aa9.67□□□□□ -0.86
GAPDHP16-201ENST00000448152 TRPM2O94759 1503 aa9.66□□□□□ -0.86
GAPDHP16-201ENST00000448152 BCL9LQ86UU0 1499 aa9.66□□□□□ -0.86
GAPDHP16-201ENST00000448152 PTCH1Q13635 1447 aa9.66□□□□□ -0.86
GAPDHP16-201ENST00000448152 DEKP35659 375 aaKnown RBP9.66□□□□□ -0.86
GAPDHP16-201ENST00000448152 SLC19A1P41440 591 aa9.66□□□□□ -0.86
GAPDHP16-201ENST00000448152 DIXDC1Q155Q3 683 aa9.66□□□□□ -0.86
GAPDHP16-201ENST00000448152 IPO9Q96P70 1041 aaKnown RBP9.66□□□□□ -0.86
GAPDHP16-201ENST00000448152 PRKRIP1Q9H875 184 aaPredicted RBP9.66□□□□□ -0.86
GAPDHP16-201ENST00000448152 SLC52A1Q9NWF4 448 aa9.66□□□□□ -0.86
GAPDHP16-201ENST00000448152 LAMC1P11047 1609 aa9.66□□□□□ -0.86
GAPDHP16-201ENST00000448152 PTPRUQ92729 1446 aa9.65□□□□□ -0.86
GAPDHP16-201ENST00000448152 XRN1Q8IZH2 1706 aaKnown RBP9.65□□□□□ -0.86
GAPDHP16-201ENST00000448152 INSRP06213 1382 aa9.65□□□□□ -0.86
GAPDHP16-201ENST00000448152 ROCK1Q13464 1354 aa9.65□□□□□ -0.86
GAPDHP16-201ENST00000448152 SSTR3P32745 418 aaPredicted RBP9.65□□□□□ -0.86
GAPDHP16-201ENST00000448152 MSS51Q4VC12 460 aa9.65□□□□□ -0.86
GAPDHP16-201ENST00000448152 BRICD5Q6PL45 260 aa9.65□□□□□ -0.86
GAPDHP16-201ENST00000448152 THAP11Q96EK4 314 aa9.65□□□□□ -0.86
GAPDHP16-201ENST00000448152 UNC13BO14795 1591 aa9.65□□□□□ -0.86
GAPDHP16-201ENST00000448152 CROCC2H7BZ55 1655 aa9.64□□□□□ -0.87
GAPDHP16-201ENST00000448152 COL22A1Q8NFW1 1626 aaPredicted RBP9.64□□□□□ -0.87
GAPDHP16-201ENST00000448152 PPM1GO15355 546 aaPredicted RBP9.64□□□□□ -0.87
GAPDHP16-201ENST00000448152 HOXA2O43364 376 aa9.64□□□□□ -0.87
GAPDHP16-201ENST00000448152 MS4A1P11836 297 aa9.64□□□□□ -0.87
GAPDHP16-201ENST00000448152 SPHKAPQ2M3C7 1700 aa9.64□□□□□ -0.87
GAPDHP16-201ENST00000448152 YY1P25490 414 aa9.63□□□□□ -0.87
GAPDHP16-201ENST00000448152 GIGYF2Q6Y7W6 1299 aaKnown RBP9.63□□□□□ -0.87
GAPDHP16-201ENST00000448152 AMOTL2Q9Y2J4 779 aa9.63□□□□□ -0.87
GAPDHP16-201ENST00000448152 CCDC7Q96M83 1385 aa9.63□□□□□ -0.87
GAPDHP16-201ENST00000448152 MARF1Q9Y4F3 1742 aaKnown RBP9.62□□□□□ -0.87
GAPDHP16-201ENST00000448152 WASHC2AQ641Q2 1341 aa9.62□□□□□ -0.87
GAPDHP16-201ENST00000448152 BRWD3Q6RI45 1802 aa9.62□□□□□ -0.87
GAPDHP16-201ENST00000448152 TCERG1O14776 1098 aaKnown RBP9.62□□□□□ -0.87
GAPDHP16-201ENST00000448152 TRIM66O15016 1216 aa9.62□□□□□ -0.87
GAPDHP16-201ENST00000448152 PDE3BQ13370 1112 aa9.62□□□□□ -0.87
GAPDHP16-201ENST00000448152 GJD4Q96KN9 370 aaPredicted RBP9.62□□□□□ -0.87
GAPDHP16-201ENST00000448152 USB1Q9BQ65 265 aaKnown RBP9.62□□□□□ -0.87
GAPDHP16-201ENST00000448152 RRP7BPQ9NSQ0 103 aa9.62□□□□□ -0.87
GAPDHP16-201ENST00000448152 NUDCQ9Y266 331 aa9.62□□□□□ -0.87
GAPDHP16-201ENST00000448152 GLI3P10071 1580 aa9.62□□□□□ -0.87
GAPDHP16-201ENST00000448152 NALCNQ8IZF0 1738 aa9.62□□□□□ -0.87
GAPDHP16-201ENST00000448152 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.62□□□□□ -0.87
GAPDHP16-201ENST00000448152 MYOM2P54296 1465 aa9.61□□□□□ -0.87
GAPDHP16-201ENST00000448152 RPRD2Q5VT52 1461 aaKnown RBP9.61□□□□□ -0.87
GAPDHP16-201ENST00000448152 GFRA3O60609 400 aa9.61□□□□□ -0.87
GAPDHP16-201ENST00000448152 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.61□□□□□ -0.87
GAPDHP16-201ENST00000448152 MRS2Q9HD23 443 aa9.61□□□□□ -0.87
GAPDHP16-201ENST00000448152 ADGRL3Q9HAR2 1447 aa9.61□□□□□ -0.87
GAPDHP16-201ENST00000448152 SOS2Q07890 1332 aaPredicted RBP9.6□□□□□ -0.87
GAPDHP16-201ENST00000448152 NRG2O14511 850 aaPredicted RBP9.6□□□□□ -0.87
GAPDHP16-201ENST00000448152 PPEF1O14829 653 aaPredicted RBP9.6□□□□□ -0.87
GAPDHP16-201ENST00000448152 HSPA5P11021 654 aaKnown RBP9.6□□□□□ -0.87
GAPDHP16-201ENST00000448152 SF3B2Q13435 895 aaKnown RBP9.6□□□□□ -0.87
GAPDHP16-201ENST00000448152 DDRGK1Q96HY6 314 aa9.6□□□□□ -0.87
GAPDHP16-201ENST00000448152 C1orf167Q5SNV9 1468 aa9.59□□□□□ -0.87
GAPDHP16-201ENST00000448152 RALGAPBQ86X10 1494 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms