RNA–Protein interactions for RNA: ENST00000447784.1

LINC00408-201, long intergenic non-protein coding RNA 408, humanhuman

TSL 5 BASIC

Gene LINC00408, Length 560 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00408-201ENST00000447784 DCAF5Q96JK2 942 aa15.26■□□□□ 0.03
LINC00408-201ENST00000447784 CCNL1Q9UK58 526 aaPredicted RBP15.26■□□□□ 0.03
LINC00408-201ENST00000447784 PAPPAQ13219 1627 aa15.25■□□□□ 0.03
LINC00408-201ENST00000447784 ERVV-2B6SEH9 535 aa15.25■□□□□ 0.03
LINC00408-201ENST00000447784 NFE2L2Q16236 605 aa15.25■□□□□ 0.03
LINC00408-201ENST00000447784 ZNF827Q17R98 1081 aa15.25■□□□□ 0.03
LINC00408-201ENST00000447784 TMOD3Q9NYL9 352 aa15.25■□□□□ 0.03
LINC00408-201ENST00000447784 PALLDQ8WX93 1383 aa15.24■□□□□ 0.03
LINC00408-201ENST00000447784 GNAT3A8MTJ3 354 aa15.24■□□□□ 0.03
LINC00408-201ENST00000447784 LMOD3Q0VAK6 560 aa15.24■□□□□ 0.03
LINC00408-201ENST00000447784 CNKSR2Q8WXI2 1034 aa15.24■□□□□ 0.03
LINC00408-201ENST00000447784 APAF1O14727 1248 aa15.23■□□□□ 0.03
LINC00408-201ENST00000447784 RIPK4P57078 832 aa15.23■□□□□ 0.03
LINC00408-201ENST00000447784 NEUROD2Q15784 382 aa15.23■□□□□ 0.03
LINC00408-201ENST00000447784 PDGFDQ9GZP0 370 aaPredicted RBP15.23■□□□□ 0.03
LINC00408-201ENST00000447784 TMPOP42166 694 aaKnown RBP15.22■□□□□ 0.03
LINC00408-201ENST00000447784 KCNQ4P56696 695 aa15.22■□□□□ 0.03
LINC00408-201ENST00000447784 RRP7AQ9Y3A4 280 aaKnown RBP15.22■□□□□ 0.03
LINC00408-201ENST00000447784 HTATSF1O43719 755 aaKnown RBP15.21■□□□□ 0.03
LINC00408-201ENST00000447784 SLC16A10Q8TF71 515 aa15.21■□□□□ 0.03
LINC00408-201ENST00000447784 MTFR1LQ9H019 292 aa15.21■□□□□ 0.03
LINC00408-201ENST00000447784 MAP3K5Q99683 1374 aa15.21■□□□□ 0.02
LINC00408-201ENST00000447784 TOGARAM1Q9Y4F4 1720 aa15.2■□□□□ 0.02
LINC00408-201ENST00000447784 KDM6AO15550 1401 aaPredicted RBP15.2■□□□□ 0.02
LINC00408-201ENST00000447784 ZBTB7AO95365 584 aa15.2■□□□□ 0.02
LINC00408-201ENST00000447784 ATG3Q9NT62 314 aa15.2■□□□□ 0.02
LINC00408-201ENST00000447784 TFCP2L1Q9NZI6 479 aa15.2■□□□□ 0.02
LINC00408-201ENST00000447784 ASAP1Q9ULH1 1129 aa15.2■□□□□ 0.02
LINC00408-201ENST00000447784 LY75O60449 1722 aa15.2■□□□□ 0.02
LINC00408-201ENST00000447784 CASZ1Q86V15 1759 aa15.19■□□□□ 0.02
LINC00408-201ENST00000447784 LOC102724428A0A0B4J2F2 783 aa15.19■□□□□ 0.02
LINC00408-201ENST00000447784 SIK1P57059 783 aa15.19■□□□□ 0.02
LINC00408-201ENST00000447784 CABP4P57796 275 aa15.19■□□□□ 0.02
LINC00408-201ENST00000447784 PNPLA7Q6ZV29 1317 aa15.18■□□□□ 0.02
LINC00408-201ENST00000447784 PTGER2P43116 358 aa15.18■□□□□ 0.02
LINC00408-201ENST00000447784 TEFQ10587 303 aa15.18■□□□□ 0.02
LINC00408-201ENST00000447784 NGEFQ8N5V2 710 aa15.18■□□□□ 0.02
LINC00408-201ENST00000447784 PPP1R1BQ9UD71 204 aaPredicted RBP15.18■□□□□ 0.02
LINC00408-201ENST00000447784 SENP3-EIF4A1A0A087X0R7 540 aa15.17■□□□□ 0.02
LINC00408-201ENST00000447784 RNMTO43148 476 aaKnown RBP15.17■□□□□ 0.02
LINC00408-201ENST00000447784 CALD1Q05682 793 aaKnown RBP15.17■□□□□ 0.02
LINC00408-201ENST00000447784 MCM10Q7L590 875 aa15.17■□□□□ 0.02
LINC00408-201ENST00000447784 SGIP1Q9BQI5 828 aa15.17■□□□□ 0.02
LINC00408-201ENST00000447784 ATF5Q9Y2D1 282 aaPredicted RBP15.17■□□□□ 0.02
LINC00408-201ENST00000447784 SALL2Q9Y467 1007 aaPredicted RBP15.17■□□□□ 0.02
LINC00408-201ENST00000447784 FLAD1Q8NFF5 587 aa15.16■□□□□ 0.02
LINC00408-201ENST00000447784 IL17REQ8NFR9 667 aa15.16■□□□□ 0.02
LINC00408-201ENST00000447784 LGR6Q9HBX8 967 aa15.16■□□□□ 0.02
LINC00408-201ENST00000447784 DCTN1Q14203 1278 aa15.15■□□□□ 0.02
LINC00408-201ENST00000447784 NCBP3Q53F19 620 aaKnown RBP15.15■□□□□ 0.02
LINC00408-201ENST00000447784 NFATC2IPQ8NCF5 419 aa15.15■□□□□ 0.02
LINC00408-201ENST00000447784 KAT6BQ8WYB5 2073 aa15.15■□□□□ 0.02
LINC00408-201ENST00000447784 ATP6V1AP38606 617 aa15.14■□□□□ 0.01
LINC00408-201ENST00000447784 AK7Q96M32 723 aa15.14■□□□□ 0.01
LINC00408-201ENST00000447784 SLC52A2Q9HAB3 445 aa15.14■□□□□ 0.01
LINC00408-201ENST00000447784 ITGB4P16144 1822 aa15.13■□□□□ 0.01
LINC00408-201ENST00000447784 HNRNPUQ00839 825 aaKnown RBP eCLIP15.13■□□□□ 0.01
LINC00408-201ENST00000447784 ITPK1Q13572 414 aa15.13■□□□□ 0.01
LINC00408-201ENST00000447784 CCDC27Q2M243 656 aa15.13■□□□□ 0.01
LINC00408-201ENST00000447784 COL23A1Q86Y22 540 aaPredicted RBP15.13■□□□□ 0.01
LINC00408-201ENST00000447784 THUMPD2Q9BTF0 503 aaKnown RBP15.13■□□□□ 0.01
LINC00408-201ENST00000447784 TRIM35Q9UPQ4 493 aa15.13■□□□□ 0.01
LINC00408-201ENST00000447784 HOXD11P31277 338 aaPredicted RBP15.12■□□□□ 0.01
LINC00408-201ENST00000447784 LINC00116Q8NCU8 138 aa15.12■□□□□ 0.01
LINC00408-201ENST00000447784 SLC4A9Q96Q91 983 aa15.12■□□□□ 0.01
LINC00408-201ENST00000447784 SSFA2P28290 1259 aa15.11■□□□□ 0.01
LINC00408-201ENST00000447784 TAF7Q15545 349 aaPredicted RBP15.11■□□□□ 0.01
LINC00408-201ENST00000447784 WWC1Q8IX03 1113 aa15.11■□□□□ 0.01
LINC00408-201ENST00000447784 ARXQ96QS3 562 aa15.11■□□□□ 0.01
LINC00408-201ENST00000447784 RBM42Q9BTD8 480 aaKnown RBP15.11■□□□□ 0.01
LINC00408-201ENST00000447784 LAS1LQ9Y4W2 734 aaKnown RBP15.11■□□□□ 0.01
LINC00408-201ENST00000447784 QSER1Q2KHR3 1735 aa15.11■□□□□ 0.01
LINC00408-201ENST00000447784 MRC1P22897 1456 aa15.1■□□□□ 0.01
LINC00408-201ENST00000447784 BTBD11A6QL63 1104 aa15.1■□□□□ 0.01
LINC00408-201ENST00000447784 POLD1P28340 1107 aa15.1■□□□□ 0.01
LINC00408-201ENST00000447784 RC3H1Q5TC82 1133 aaKnown RBP15.1■□□□□ 0.01
LINC00408-201ENST00000447784 TTC5Q8N0Z6 440 aa15.1■□□□□ 0.01
LINC00408-201ENST00000447784 CEMIPQ8WUJ3 1361 aa15.1■□□□□ 0.01
LINC00408-201ENST00000447784 C5P01031 1676 aa15.09■□□□□ 0.01
LINC00408-201ENST00000447784 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.09■□□□□ 0.01
LINC00408-201ENST00000447784 WDR63Q8IWG1 891 aa15.09■□□□□ 0.01
LINC00408-201ENST00000447784 C4BP0C0L5 1744 aa15.09■□□□□ 0.01
LINC00408-201ENST00000447784 PTCD1O75127 700 aaKnown RBP15.08■□□□□ 0
LINC00408-201ENST00000447784 AMIGO3Q86WK7 504 aa15.08■□□□□ 0
LINC00408-201ENST00000447784 CNTNAP4Q9C0A0 1308 aa15.08■□□□□ 0
LINC00408-201ENST00000447784 ZNF831Q5JPB2 1677 aa15.07■□□□□ 0
LINC00408-201ENST00000447784 GNPATO15228 680 aa15.07■□□□□ 0
LINC00408-201ENST00000447784 GNAI1P63096 354 aa15.07■□□□□ 0
LINC00408-201ENST00000447784 SYT17Q9BSW7 474 aa15.07■□□□□ 0
LINC00408-201ENST00000447784 FHDC1Q9C0D6 1143 aaPredicted RBP15.07■□□□□ 0
LINC00408-201ENST00000447784 BABAM1Q9NWV8 329 aa15.07■□□□□ 0
LINC00408-201ENST00000447784 TSPYL4Q9UJ04 414 aa15.07■□□□□ 0
LINC00408-201ENST00000447784 ADAMTS7Q9UKP4 1686 aa15.06■□□□□ 0
LINC00408-201ENST00000447784 PHF14O94880 888 aa15.06■□□□□ 0
LINC00408-201ENST00000447784 CFAP44Q96MT7 982 aa15.06■□□□□ 0
LINC00408-201ENST00000447784 YTHDC1Q96MU7 727 aaKnown RBP15.06■□□□□ 0
LINC00408-201ENST00000447784 IFT57Q9NWB7 429 aa15.06■□□□□ 0
LINC00408-201ENST00000447784 MIS18AQ9NYP9 233 aa15.06■□□□□ 0
LINC00408-201ENST00000447784 RTCBQ9Y3I0 505 aaKnown RBP15.06■□□□□ 0
LINC00408-201ENST00000447784 RPS6KA4O75676 772 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms