RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 TRIM66O15016 1216 aa8.49□□□□□ -1.05
SDCBP-205ENST00000447267 NDUFV2P19404 249 aa8.49□□□□□ -1.05
SDCBP-205ENST00000447267 TOR4AQ9NXH8 423 aa8.49□□□□□ -1.05
SDCBP-205ENST00000447267 FAM187AA6NFU0 413 aa8.48□□□□□ -1.05
SDCBP-205ENST00000447267 MOXD2PA6NHM9 499 aa8.48□□□□□ -1.05
SDCBP-205ENST00000447267 POTECB2RU33 542 aa8.48□□□□□ -1.05
SDCBP-205ENST00000447267 DGAT1O75907 488 aa8.48□□□□□ -1.05
SDCBP-205ENST00000447267 TTLL12Q14166 644 aaPredicted RBP8.48□□□□□ -1.05
SDCBP-205ENST00000447267 UNC5CLQ8IV45 518 aa8.48□□□□□ -1.05
SDCBP-205ENST00000447267 SYT17Q9BSW7 474 aa8.48□□□□□ -1.05
SDCBP-205ENST00000447267 PRXQ9BXM0 1461 aa8.48□□□□□ -1.05
SDCBP-205ENST00000447267 CDC42BPBQ9Y5S2 1711 aa8.48□□□□□ -1.05
SDCBP-205ENST00000447267 UNC13BO14795 1591 aa8.48□□□□□ -1.05
SDCBP-205ENST00000447267 FDX1P10109 184 aa8.47□□□□□ -1.05
SDCBP-205ENST00000447267 MS4A1P11836 297 aa8.47□□□□□ -1.05
SDCBP-205ENST00000447267 TRIM32Q13049 653 aa8.47□□□□□ -1.05
SDCBP-205ENST00000447267 NUTM1Q86Y26 1132 aa8.47□□□□□ -1.05
SDCBP-205ENST00000447267 FHDC1Q9C0D6 1143 aaPredicted RBP8.47□□□□□ -1.05
SDCBP-205ENST00000447267 WWC3Q9ULE0 1092 aa8.47□□□□□ -1.05
SDCBP-205ENST00000447267 ASXL1Q8IXJ9 1541 aa8.47□□□□□ -1.05
SDCBP-205ENST00000447267 PTCH1Q13635 1447 aa8.46□□□□□ -1.05
SDCBP-205ENST00000447267 ARHGAP35Q9NRY4 1499 aa8.46□□□□□ -1.05
SDCBP-205ENST00000447267 SYCP2Q9BX26 1530 aa8.46□□□□□ -1.05
SDCBP-205ENST00000447267 ST8SIA5O15466 376 aa8.46□□□□□ -1.06
SDCBP-205ENST00000447267 PPP1R15AO75807 674 aaPredicted RBP8.46□□□□□ -1.06
SDCBP-205ENST00000447267 SKOR1P84550 965 aa8.46□□□□□ -1.06
SDCBP-205ENST00000447267 PKDCCQ504Y2 493 aa8.46□□□□□ -1.06
SDCBP-205ENST00000447267 CCDC9Q9Y3X0 531 aaKnown RBP8.46□□□□□ -1.06
SDCBP-205ENST00000447267 UTRNP46939 3433 aa8.46□□□□□ -1.06
SDCBP-205ENST00000447267 TET3O43151 1660 aa8.46□□□□□ -1.06
SDCBP-205ENST00000447267 ERVK-7P63135 1459 aa8.45□□□□□ -1.06
SDCBP-205ENST00000447267 GLI3P10071 1580 aa8.45□□□□□ -1.06
SDCBP-205ENST00000447267 CD2BP2O95400 341 aaKnown RBP8.45□□□□□ -1.06
SDCBP-205ENST00000447267 JUNDP17535 347 aa8.45□□□□□ -1.06
SDCBP-205ENST00000447267 NBPF8Q3BBV2 869 aa8.45□□□□□ -1.06
SDCBP-205ENST00000447267 NBPF14Q5TI25 921 aa8.45□□□□□ -1.06
SDCBP-205ENST00000447267 PTCRAQ6ISU1 281 aaPredicted RBP8.45□□□□□ -1.06
SDCBP-205ENST00000447267 PDGFDQ9GZP0 370 aaPredicted RBP8.45□□□□□ -1.06
SDCBP-205ENST00000447267 CLIP1P30622 1438 aa8.45□□□□□ -1.06
SDCBP-205ENST00000447267 UBR1Q8IWV7 1749 aa8.44□□□□□ -1.06
SDCBP-205ENST00000447267 APBA3O96018 575 aa8.44□□□□□ -1.06
SDCBP-205ENST00000447267 GPR162Q16538 588 aa8.44□□□□□ -1.06
SDCBP-205ENST00000447267 BEGAINQ9BUH8 593 aa8.44□□□□□ -1.06
SDCBP-205ENST00000447267 NCOA3Q9Y6Q9 1424 aa8.44□□□□□ -1.06
SDCBP-205ENST00000447267 TRIM37O94972 964 aa8.43□□□□□ -1.06
SDCBP-205ENST00000447267 ZBTB7AO95365 584 aa8.43□□□□□ -1.06
SDCBP-205ENST00000447267 RETREG3Q86VR2 466 aa8.43□□□□□ -1.06
SDCBP-205ENST00000447267 CCDC24Q8N4L8 307 aa8.43□□□□□ -1.06
SDCBP-205ENST00000447267 DACH1Q9UI36 760 aa8.43□□□□□ -1.06
SDCBP-205ENST00000447267 BRWD3Q6RI45 1802 aa8.43□□□□□ -1.06
SDCBP-205ENST00000447267 WNT7AO00755 349 aa8.42□□□□□ -1.06
SDCBP-205ENST00000447267 ZNF787Q6DD87 383 aa8.42□□□□□ -1.06
SDCBP-205ENST00000447267 AK7Q96M32 723 aa8.42□□□□□ -1.06
SDCBP-205ENST00000447267 TBC1D2Q9BYX2 928 aa8.42□□□□□ -1.06
SDCBP-205ENST00000447267 AAASQ9NRG9 546 aa8.42□□□□□ -1.06
SDCBP-205ENST00000447267 PCDHB15Q9Y5E8 787 aa8.42□□□□□ -1.06
SDCBP-205ENST00000447267 ZNF644Q9H582 1327 aaPredicted RBP8.42□□□□□ -1.06
SDCBP-205ENST00000447267 MROH1Q8NDA8 1641 aa8.42□□□□□ -1.06
SDCBP-205ENST00000447267 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.42□□□□□ -1.06
SDCBP-205ENST00000447267 INO80Q9ULG1 1556 aaPredicted RBP8.41□□□□□ -1.06
SDCBP-205ENST00000447267 MST1RQ04912 1400 aa8.41□□□□□ -1.06
SDCBP-205ENST00000447267 C6orf229H3BNL8 230 aa8.41□□□□□ -1.06
SDCBP-205ENST00000447267 SMPD1P17405 629 aa8.41□□□□□ -1.06
SDCBP-205ENST00000447267 IDI1Q13907 227 aa8.41□□□□□ -1.06
SDCBP-205ENST00000447267 ZNF526Q8TF50 670 aaPredicted RBP8.41□□□□□ -1.06
SDCBP-205ENST00000447267 MRGPRX2Q96LB1 330 aa8.41□□□□□ -1.06
SDCBP-205ENST00000447267 SLC24A3Q9HC58 644 aa8.41□□□□□ -1.06
SDCBP-205ENST00000447267 ZBTB24O43167 697 aaPredicted RBP8.4□□□□□ -1.06
SDCBP-205ENST00000447267 AVPP01185 164 aa8.4□□□□□ -1.06
SDCBP-205ENST00000447267 VPS72Q15906 364 aa8.4□□□□□ -1.06
SDCBP-205ENST00000447267 SOS2Q07890 1332 aaPredicted RBP8.39□□□□□ -1.07
SDCBP-205ENST00000447267 J3QL48 77 aa8.39□□□□□ -1.07
SDCBP-205ENST00000447267 HTRA3P83110 453 aa8.39□□□□□ -1.07
SDCBP-205ENST00000447267 RSBN1LQ6PCB5 846 aaPredicted RBP8.39□□□□□ -1.07
SDCBP-205ENST00000447267 ORAI2Q96SN7 254 aa8.39□□□□□ -1.07
SDCBP-205ENST00000447267 NUDT12Q9BQG2 462 aa8.39□□□□□ -1.07
SDCBP-205ENST00000447267 GPBP1L1Q9HC44 474 aaPredicted RBP8.39□□□□□ -1.07
SDCBP-205ENST00000447267 CFDP1Q9UEE9 299 aaPredicted RBP8.39□□□□□ -1.07
SDCBP-205ENST00000447267 PREX2Q70Z35 1606 aa8.39□□□□□ -1.07
SDCBP-205ENST00000447267 DISP2A7MBM2 1401 aa8.38□□□□□ -1.07
SDCBP-205ENST00000447267 FMN1Q68DA7 1419 aa8.38□□□□□ -1.07
SDCBP-205ENST00000447267 PDE4DQ08499 809 aa8.38□□□□□ -1.07
SDCBP-205ENST00000447267 CYP4X1Q8N118 509 aa8.38□□□□□ -1.07
SDCBP-205ENST00000447267 AMOTL2Q9Y2J4 779 aa8.38□□□□□ -1.07
SDCBP-205ENST00000447267 TBX22Q9Y458 520 aa8.38□□□□□ -1.07
SDCBP-205ENST00000447267 KIAA1107Q9UPP5 1409 aa8.37□□□□□ -1.07
SDCBP-205ENST00000447267 RC3H1Q5TC82 1133 aaKnown RBP8.37□□□□□ -1.07
SDCBP-205ENST00000447267 CRIPAKQ8N1N5 446 aa8.37□□□□□ -1.07
SDCBP-205ENST00000447267 PRR7Q8TB68 274 aa8.37□□□□□ -1.07
SDCBP-205ENST00000447267 GPATCH8Q9UKJ3 1502 aaKnown RBP8.37□□□□□ -1.07
SDCBP-205ENST00000447267 SHANK3Q9BYB0 1731 aa8.37□□□□□ -1.07
SDCBP-205ENST00000447267 CFAP99D6REC4 459 aa8.36□□□□□ -1.07
SDCBP-205ENST00000447267 SPTLC1O15269 473 aa8.36□□□□□ -1.07
SDCBP-205ENST00000447267 XPCQ01831 940 aaPredicted RBP8.36□□□□□ -1.07
SDCBP-205ENST00000447267 ZNF775Q96BV0 537 aaPredicted RBP8.36□□□□□ -1.07
SDCBP-205ENST00000447267 ATP10DQ9P241 1426 aa8.36□□□□□ -1.07
SDCBP-205ENST00000447267 NRKQ7Z2Y5 1582 aa8.35□□□□□ -1.07
SDCBP-205ENST00000447267 SLIT2O94813 1529 aa8.35□□□□□ -1.07
SDCBP-205ENST00000447267 MYOM2P54296 1465 aa8.35□□□□□ -1.07
SDCBP-205ENST00000447267 MTMR2Q13614 643 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms