RNA–Protein interactions for RNA: ENST00000446548.1

LINC00578-204, long intergenic non-protein coding RNA 578, humanhuman

TSL 4 BASIC

Gene LINC00578, Length 519 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00578-204ENST00000446548 ADAM33Q9BZ11 813 aa11.53□□□□□ -0.56
LINC00578-204ENST00000446548 LTN1O94822 1766 aa11.53□□□□□ -0.56
LINC00578-204ENST00000446548 DLG5Q8TDM6 1919 aa11.52□□□□□ -0.56
LINC00578-204ENST00000446548 U2AF1L5P0DN76 240 aaPredicted RBP11.52□□□□□ -0.57
LINC00578-204ENST00000446548 U2AF1Q01081 240 aaKnown RBP eCLIP11.52□□□□□ -0.57
LINC00578-204ENST00000446548 TRMT2AQ8IZ69 625 aaKnown RBP11.52□□□□□ -0.57
LINC00578-204ENST00000446548 PLEKHF1Q96S99 279 aa11.52□□□□□ -0.57
LINC00578-204ENST00000446548 NCOA3Q9Y6Q9 1424 aa11.52□□□□□ -0.57
LINC00578-204ENST00000446548 PSEN2P49810 448 aa11.51□□□□□ -0.57
LINC00578-204ENST00000446548 IRX6P78412 446 aaPredicted RBP11.51□□□□□ -0.57
LINC00578-204ENST00000446548 SLFN5Q08AF3 891 aa11.51□□□□□ -0.57
LINC00578-204ENST00000446548 RRS1Q15050 365 aaKnown RBP11.51□□□□□ -0.57
LINC00578-204ENST00000446548 DUSP27Q5VZP5 1158 aa11.51□□□□□ -0.57
LINC00578-204ENST00000446548 PROSER2Q86WR7 435 aaPredicted RBP11.51□□□□□ -0.57
LINC00578-204ENST00000446548 TCP11L2Q8N4U5 519 aa11.51□□□□□ -0.57
LINC00578-204ENST00000446548 ALS2Q96Q42 1657 aa11.51□□□□□ -0.57
LINC00578-204ENST00000446548 DCCP43146 1447 aa11.51□□□□□ -0.57
LINC00578-204ENST00000446548 C1orf167Q5SNV9 1468 aa11.51□□□□□ -0.57
LINC00578-204ENST00000446548 PHRF1Q9P1Y6 1649 aaKnown RBP11.5□□□□□ -0.57
LINC00578-204ENST00000446548 U2SURPO15042 1029 aaKnown RBP11.5□□□□□ -0.57
LINC00578-204ENST00000446548 IL13P35225 146 aa11.5□□□□□ -0.57
LINC00578-204ENST00000446548 PLSCR2Q9NRY7 297 aa11.5□□□□□ -0.57
LINC00578-204ENST00000446548 TMEM94Q12767 1356 aa11.5□□□□□ -0.57
LINC00578-204ENST00000446548 MST1RQ04912 1400 aa11.5□□□□□ -0.57
LINC00578-204ENST00000446548 NFAT5O94916 1531 aa11.5□□□□□ -0.57
LINC00578-204ENST00000446548 CCDC27Q2M243 656 aa11.49□□□□□ -0.57
LINC00578-204ENST00000446548 WWC1Q8IX03 1113 aa11.49□□□□□ -0.57
LINC00578-204ENST00000446548 RSPH6AQ9H0K4 717 aa11.49□□□□□ -0.57
LINC00578-204ENST00000446548 RRP7AQ9Y3A4 280 aaKnown RBP11.49□□□□□ -0.57
LINC00578-204ENST00000446548 PPM1GO15355 546 aaPredicted RBP11.48□□□□□ -0.57
LINC00578-204ENST00000446548 C14orf37Q86TY3 774 aa11.48□□□□□ -0.57
LINC00578-204ENST00000446548 SPNS2Q8IVW8 549 aa11.48□□□□□ -0.57
LINC00578-204ENST00000446548 RCAN3Q9UKA8 241 aa11.48□□□□□ -0.57
LINC00578-204ENST00000446548 SLIT3O75094 1523 aa11.47□□□□□ -0.57
LINC00578-204ENST00000446548 TK2O00142 265 aa11.47□□□□□ -0.57
LINC00578-204ENST00000446548 MAP3K7O43318 606 aa11.47□□□□□ -0.57
LINC00578-204ENST00000446548 EN1Q05925 392 aaPredicted RBP11.47□□□□□ -0.57
LINC00578-204ENST00000446548 DMRTA1Q5VZB9 504 aa11.47□□□□□ -0.57
LINC00578-204ENST00000446548 ERICH6BQ5W0A0 696 aa11.47□□□□□ -0.57
LINC00578-204ENST00000446548 ORAI2Q96SN7 254 aa11.47□□□□□ -0.57
LINC00578-204ENST00000446548 CRYBG1Q9Y4K1 1723 aa11.46□□□□□ -0.57
LINC00578-204ENST00000446548 SBNO1A3KN83 1393 aa11.46□□□□□ -0.57
LINC00578-204ENST00000446548 MAP3K19Q56UN5 1328 aa11.46□□□□□ -0.57
LINC00578-204ENST00000446548 E9PSI1 815 aa11.46□□□□□ -0.57
LINC00578-204ENST00000446548 FCHSD2O94868 740 aa11.46□□□□□ -0.57
LINC00578-204ENST00000446548 RRP1P56182 461 aaKnown RBP11.46□□□□□ -0.57
LINC00578-204ENST00000446548 ESCO1Q5FWF5 840 aa11.46□□□□□ -0.57
LINC00578-204ENST00000446548 C19orf44Q9H6X5 657 aa11.46□□□□□ -0.57
LINC00578-204ENST00000446548 FLT4P35916 1363 aa11.45□□□□□ -0.58
LINC00578-204ENST00000446548 TMPOP42166 694 aaKnown RBP11.45□□□□□ -0.58
LINC00578-204ENST00000446548 EIF4A2Q14240 407 aaKnown RBP11.45□□□□□ -0.58
LINC00578-204ENST00000446548 C6orf132Q5T0Z8 1188 aa11.45□□□□□ -0.58
LINC00578-204ENST00000446548 ADGRD1Q6QNK2 874 aa11.45□□□□□ -0.58
LINC00578-204ENST00000446548 WDR63Q8IWG1 891 aa11.45□□□□□ -0.58
LINC00578-204ENST00000446548 RGPD2P0DJD1 1756 aa11.44□□□□□ -0.58
LINC00578-204ENST00000446548 KIF24Q5T7B8 1368 aa11.44□□□□□ -0.58
LINC00578-204ENST00000446548 MAPK8IP3Q9UPT6 1336 aa11.44□□□□□ -0.58
LINC00578-204ENST00000446548 PPP1R3GB7ZBB8 358 aa11.44□□□□□ -0.58
LINC00578-204ENST00000446548 PRKAR2BP31323 418 aa11.44□□□□□ -0.58
LINC00578-204ENST00000446548 NEUROD2Q15784 382 aa11.44□□□□□ -0.58
LINC00578-204ENST00000446548 HMOX1P09601 288 aa11.43□□□□□ -0.58
LINC00578-204ENST00000446548 HSP90AB2PQ58FF8 381 aa11.43□□□□□ -0.58
LINC00578-204ENST00000446548 NUTM2GQ5VZR2 741 aa11.43□□□□□ -0.58
LINC00578-204ENST00000446548 ABTB2Q8N961 1025 aa11.43□□□□□ -0.58
LINC00578-204ENST00000446548 SLC4A5Q9BY07 1137 aa11.43□□□□□ -0.58
LINC00578-204ENST00000446548 PNNQ9H307 717 aaKnown RBP11.43□□□□□ -0.58
LINC00578-204ENST00000446548 RTL1A6NKG5 1358 aa11.42□□□□□ -0.58
LINC00578-204ENST00000446548 ARHGEF10O15013 1369 aa11.42□□□□□ -0.58
LINC00578-204ENST00000446548 MED1Q15648 1581 aaPredicted RBP11.42□□□□□ -0.58
LINC00578-204ENST00000446548 PHACTR3Q96KR7 559 aa11.42□□□□□ -0.58
LINC00578-204ENST00000446548 MSH6P52701 1360 aa11.41□□□□□ -0.58
LINC00578-204ENST00000446548 RGPD5Q99666 1765 aa11.41□□□□□ -0.58
LINC00578-204ENST00000446548 CAMTA1Q9Y6Y1 1673 aa11.41□□□□□ -0.58
LINC00578-204ENST00000446548 PXDNQ92626 1479 aa11.41□□□□□ -0.58
LINC00578-204ENST00000446548 SEMA3EO15041 775 aa11.41□□□□□ -0.58
LINC00578-204ENST00000446548 ATF3P18847 181 aa11.41□□□□□ -0.58
LINC00578-204ENST00000446548 OSBPP22059 807 aa11.41□□□□□ -0.58
LINC00578-204ENST00000446548 MLLT3P42568 568 aaPredicted RBP11.41□□□□□ -0.58
LINC00578-204ENST00000446548 PSME1Q06323 249 aa11.41□□□□□ -0.58
LINC00578-204ENST00000446548 USP19O94966 1318 aa11.4□□□□□ -0.58
LINC00578-204ENST00000446548 ZNF335Q9H4Z2 1342 aaPredicted RBP11.4□□□□□ -0.58
LINC00578-204ENST00000446548 FOXO3O43524 673 aa11.4□□□□□ -0.58
LINC00578-204ENST00000446548 HOXC9P31274 260 aa11.4□□□□□ -0.58
LINC00578-204ENST00000446548 NFE2L2Q16236 605 aa11.4□□□□□ -0.58
LINC00578-204ENST00000446548 SMYD5Q6GMV2 418 aa11.4□□□□□ -0.58
LINC00578-204ENST00000446548 AEBP1Q8IUX7 1158 aa11.4□□□□□ -0.58
LINC00578-204ENST00000446548 ZBED2Q9BTP6 218 aa11.4□□□□□ -0.58
LINC00578-204ENST00000446548 PPP4R2Q9NY27 417 aa11.4□□□□□ -0.58
LINC00578-204ENST00000446548 KDRP35968 1356 aa11.4□□□□□ -0.59
LINC00578-204ENST00000446548 IL16Q14005 1332 aa11.39□□□□□ -0.59
LINC00578-204ENST00000446548 NHSL1Q5SYE7 1610 aa11.39□□□□□ -0.59
LINC00578-204ENST00000446548 COL18A1P39060 1754 aa11.39□□□□□ -0.59
LINC00578-204ENST00000446548 RIPK4P57078 832 aa11.39□□□□□ -0.59
LINC00578-204ENST00000446548 XPCQ01831 940 aaPredicted RBP11.39□□□□□ -0.59
LINC00578-204ENST00000446548 KRT28Q7Z3Y7 464 aa11.39□□□□□ -0.59
LINC00578-204ENST00000446548 VPS9D1Q9Y2B5 631 aa11.39□□□□□ -0.59
LINC00578-204ENST00000446548 LRRC37A3O60309 1634 aa11.38□□□□□ -0.59
LINC00578-204ENST00000446548 IGSF1Q8N6C5 1336 aa11.38□□□□□ -0.59
LINC00578-204ENST00000446548 ABCA3Q99758 1704 aa11.38□□□□□ -0.59
LINC00578-204ENST00000446548 COL9A1P20849 921 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms