RNA–Protein interactions for RNA: ENST00000446317.1

SF3A3P1-201, Transcript of splicing factor 3a, subunit 3 pseudogene 1, humanhuman

BASIC

Gene SF3A3P1, Length 1,477 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3P1-201ENST00000446317 LMOD3Q0VAK6 560 aa9.86□□□□□ -0.83
SF3A3P1-201ENST00000446317 DCAF5Q96JK2 942 aa9.86□□□□□ -0.83
SF3A3P1-201ENST00000446317 TMOD3Q9NYL9 352 aa9.86□□□□□ -0.83
SF3A3P1-201ENST00000446317 ASAP1Q9ULH1 1129 aa9.86□□□□□ -0.83
SF3A3P1-201ENST00000446317 ZBED9Q6R2W3 1325 aa9.86□□□□□ -0.83
SF3A3P1-201ENST00000446317 PRAMEF22A3QJZ6 481 aa9.85□□□□□ -0.83
SF3A3P1-201ENST00000446317 BTBD11A6QL63 1104 aa9.85□□□□□ -0.83
SF3A3P1-201ENST00000446317 ONECUT3O60422 494 aaPredicted RBP9.85□□□□□ -0.83
SF3A3P1-201ENST00000446317 GOLGA2Q08379 1002 aa9.85□□□□□ -0.83
SF3A3P1-201ENST00000446317 PIGBQ92521 554 aa9.85□□□□□ -0.83
SF3A3P1-201ENST00000446317 SLC52A2Q9HAB3 445 aa9.85□□□□□ -0.83
SF3A3P1-201ENST00000446317 MBIPQ9NS73 344 aa9.85□□□□□ -0.83
SF3A3P1-201ENST00000446317 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.85□□□□□ -0.83
SF3A3P1-201ENST00000446317 ZNF521Q96K83 1311 aa9.85□□□□□ -0.83
SF3A3P1-201ENST00000446317 FANCIQ9NVI1 1328 aa9.85□□□□□ -0.83
SF3A3P1-201ENST00000446317 PIP4K2AP48426 406 aaPredicted RBP9.85□□□□□ -0.83
SF3A3P1-201ENST00000446317 RBM42Q9BTD8 480 aaKnown RBP9.85□□□□□ -0.83
SF3A3P1-201ENST00000446317 HSP90AB1P08238 724 aaKnown RBP9.84□□□□□ -0.83
SF3A3P1-201ENST00000446317 EXOSC9Q06265 439 aaKnown RBP9.84□□□□□ -0.83
SF3A3P1-201ENST00000446317 SLFN5Q08AF3 891 aa9.84□□□□□ -0.83
SF3A3P1-201ENST00000446317 TAF7Q15545 349 aaPredicted RBP9.84□□□□□ -0.83
SF3A3P1-201ENST00000446317 ILDR2Q71H61 639 aa9.84□□□□□ -0.83
SF3A3P1-201ENST00000446317 TSPYL6Q8N831 410 aa9.84□□□□□ -0.83
SF3A3P1-201ENST00000446317 NKX1-1Q15270 411 aaPredicted RBP9.83□□□□□ -0.84
SF3A3P1-201ENST00000446317 CCDC27Q2M243 656 aa9.83□□□□□ -0.84
SF3A3P1-201ENST00000446317 SMIM5Q71RC9 77 aa9.83□□□□□ -0.84
SF3A3P1-201ENST00000446317 C8orf58Q8NAV2 365 aa9.83□□□□□ -0.84
SF3A3P1-201ENST00000446317 BCL2L13Q9BXK5 485 aa9.83□□□□□ -0.84
SF3A3P1-201ENST00000446317 CEMIPQ8WUJ3 1361 aa9.83□□□□□ -0.84
SF3A3P1-201ENST00000446317 HTATSF1O43719 755 aaKnown RBP9.82□□□□□ -0.84
SF3A3P1-201ENST00000446317 WDR63Q8IWG1 891 aa9.82□□□□□ -0.84
SF3A3P1-201ENST00000446317 ATG3Q9NT62 314 aa9.82□□□□□ -0.84
SF3A3P1-201ENST00000446317 EP400Q96L91 3159 aa9.82□□□□□ -0.84
SF3A3P1-201ENST00000446317 SCN11AQ9UI33 1791 aa9.82□□□□□ -0.84
SF3A3P1-201ENST00000446317 VIRMAQ69YN4 1812 aaKnown RBP9.81□□□□□ -0.84
SF3A3P1-201ENST00000446317 EIF2S2P20042 333 aaKnown RBP9.81□□□□□ -0.84
SF3A3P1-201ENST00000446317 GNAI1P63096 354 aa9.81□□□□□ -0.84
SF3A3P1-201ENST00000446317 DUSP27Q5VZP5 1158 aa9.81□□□□□ -0.84
SF3A3P1-201ENST00000446317 TTC5Q8N0Z6 440 aa9.81□□□□□ -0.84
SF3A3P1-201ENST00000446317 CNKSR2Q8WXI2 1034 aa9.81□□□□□ -0.84
SF3A3P1-201ENST00000446317 ZNF496Q96IT1 587 aaPredicted RBP9.81□□□□□ -0.84
SF3A3P1-201ENST00000446317 FOXD4L1Q9NU39 408 aa9.81□□□□□ -0.84
SF3A3P1-201ENST00000446317 IFT57Q9NWB7 429 aa9.81□□□□□ -0.84
SF3A3P1-201ENST00000446317 ERVV-2B6SEH9 535 aa9.8□□□□□ -0.84
SF3A3P1-201ENST00000446317 E9PSI1 815 aa9.8□□□□□ -0.84
SF3A3P1-201ENST00000446317 CHL1O00533 1208 aa9.8□□□□□ -0.84
SF3A3P1-201ENST00000446317 APBA3O96018 575 aa9.8□□□□□ -0.84
SF3A3P1-201ENST00000446317 ANXA1P04083 346 aa9.8□□□□□ -0.84
SF3A3P1-201ENST00000446317 ZNF853P0CG23 659 aa9.8□□□□□ -0.84
SF3A3P1-201ENST00000446317 FAM196AQ6ZSG2 479 aa9.8□□□□□ -0.84
SF3A3P1-201ENST00000446317 ZNF428Q96B54 188 aa9.8□□□□□ -0.84
SF3A3P1-201ENST00000446317 CFAP44Q96MT7 982 aa9.8□□□□□ -0.84
SF3A3P1-201ENST00000446317 ITGB4P16144 1822 aa9.8□□□□□ -0.84
SF3A3P1-201ENST00000446317 CALD1Q05682 793 aaKnown RBP9.79□□□□□ -0.84
SF3A3P1-201ENST00000446317 ZNF790Q6PG37 636 aa9.79□□□□□ -0.84
SF3A3P1-201ENST00000446317 NGEFQ8N5V2 710 aa9.79□□□□□ -0.84
SF3A3P1-201ENST00000446317 MYH16Q9H6N6 1097 aa9.79□□□□□ -0.84
SF3A3P1-201ENST00000446317 ZNF330Q9Y3S2 320 aaPredicted RBP9.79□□□□□ -0.84
SF3A3P1-201ENST00000446317 BCL9O00512 1426 aa9.79□□□□□ -0.84
SF3A3P1-201ENST00000446317 MRC1P22897 1456 aa9.79□□□□□ -0.84
SF3A3P1-201ENST00000446317 EIF4A1P60842 406 aaKnown RBP9.79□□□□□ -0.84
SF3A3P1-201ENST00000446317 DEFB132Q7Z7B7 95 aa9.79□□□□□ -0.84
SF3A3P1-201ENST00000446317 DNAJC10Q8IXB1 793 aa9.79□□□□□ -0.84
SF3A3P1-201ENST00000446317 SLC4A9Q96Q91 983 aa9.79□□□□□ -0.84
SF3A3P1-201ENST00000446317 ADAMTS7Q9UKP4 1686 aa9.78□□□□□ -0.84
SF3A3P1-201ENST00000446317 SIPA1L3O60292 1781 aaPredicted RBP9.78□□□□□ -0.84
SF3A3P1-201ENST00000446317 PALLDQ8WX93 1383 aa9.78□□□□□ -0.84
SF3A3P1-201ENST00000446317 NHSQ6T4R5 1651 aa9.78□□□□□ -0.84
SF3A3P1-201ENST00000446317 IRX6P78412 446 aaPredicted RBP9.78□□□□□ -0.84
SF3A3P1-201ENST00000446317 EN1Q05925 392 aaPredicted RBP9.78□□□□□ -0.84
SF3A3P1-201ENST00000446317 TWISTNBQ3B726 338 aaPredicted RBP9.78□□□□□ -0.84
SF3A3P1-201ENST00000446317 IL16Q14005 1332 aa9.77□□□□□ -0.84
SF3A3P1-201ENST00000446317 BTAF1O14981 1849 aa9.77□□□□□ -0.85
SF3A3P1-201ENST00000446317 KCPQ6ZWJ8 1503 aa9.77□□□□□ -0.85
SF3A3P1-201ENST00000446317 MYL6BP14649 208 aa9.77□□□□□ -0.85
SF3A3P1-201ENST00000446317 ATP6V1AP38606 617 aa9.77□□□□□ -0.85
SF3A3P1-201ENST00000446317 ITPK1Q13572 414 aa9.77□□□□□ -0.85
SF3A3P1-201ENST00000446317 ARXQ96QS3 562 aa9.77□□□□□ -0.85
SF3A3P1-201ENST00000446317 BCL11BQ9C0K0 894 aaPredicted RBP9.77□□□□□ -0.85
SF3A3P1-201ENST00000446317 USP16Q9Y5T5 823 aa9.77□□□□□ -0.85
SF3A3P1-201ENST00000446317 KAT6BQ8WYB5 2073 aa9.77□□□□□ -0.85
SF3A3P1-201ENST00000446317 C5P01031 1676 aa9.76□□□□□ -0.85
SF3A3P1-201ENST00000446317 KDM3BQ7LBC6 1761 aa9.76□□□□□ -0.85
SF3A3P1-201ENST00000446317 PLIN1O60240 522 aa9.76□□□□□ -0.85
SF3A3P1-201ENST00000446317 BCAR3O75815 825 aa9.76□□□□□ -0.85
SF3A3P1-201ENST00000446317 A1BGP04217 495 aa9.76□□□□□ -0.85
SF3A3P1-201ENST00000446317 EZH2Q15910 746 aaKnown RBP9.76□□□□□ -0.85
SF3A3P1-201ENST00000446317 PROSER3Q2NL68 480 aa9.76□□□□□ -0.85
SF3A3P1-201ENST00000446317 TRMT2AQ8IZ69 625 aaKnown RBP9.76□□□□□ -0.85
SF3A3P1-201ENST00000446317 FMNL2Q96PY5 1086 aa9.76□□□□□ -0.85
SF3A3P1-201ENST00000446317 TNNQ9UQP3 1299 aa9.76□□□□□ -0.85
SF3A3P1-201ENST00000446317 PAPPAQ13219 1627 aa9.75□□□□□ -0.85
SF3A3P1-201ENST00000446317 LOC102724428A0A0B4J2F2 783 aa9.75□□□□□ -0.85
SF3A3P1-201ENST00000446317 CANXP27824 592 aaKnown RBP9.75□□□□□ -0.85
SF3A3P1-201ENST00000446317 SIK1P57059 783 aa9.75□□□□□ -0.85
SF3A3P1-201ENST00000446317 HDGFL1Q5TGJ6 251 aa9.75□□□□□ -0.85
SF3A3P1-201ENST00000446317 ERICH6Q7L0X2 663 aa9.75□□□□□ -0.85
SF3A3P1-201ENST00000446317 LINC00116Q8NCU8 138 aa9.75□□□□□ -0.85
SF3A3P1-201ENST00000446317 FRAT1Q92837 279 aaPredicted RBP9.75□□□□□ -0.85
SF3A3P1-201ENST00000446317 CCNL1Q9UK58 526 aaPredicted RBP9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms