RNA–Protein interactions for RNA: ENST00000446026.1

SMIM12-204, Transcript of small integral membrane protein 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM12, Length 2,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM12-204ENST00000446026 ERBB3P21860 1342 aa11.21□□□□□ -0.62
SMIM12-204ENST00000446026 U2AF1L5P0DN76 240 aaPredicted RBP11.21□□□□□ -0.62
SMIM12-204ENST00000446026 U2AF1Q01081 240 aaKnown RBP eCLIP11.21□□□□□ -0.62
SMIM12-204ENST00000446026 CALD1Q05682 793 aaKnown RBP11.21□□□□□ -0.62
SMIM12-204ENST00000446026 PDCL3Q9H2J4 239 aa11.21□□□□□ -0.62
SMIM12-204ENST00000446026 BTAF1O14981 1849 aa11.2□□□□□ -0.62
SMIM12-204ENST00000446026 GOLGA6L3A6NEY3 463 aa11.2□□□□□ -0.62
SMIM12-204ENST00000446026 IP6K1Q92551 441 aa11.2□□□□□ -0.62
SMIM12-204ENST00000446026 GZF1Q9H116 711 aaPredicted RBP11.2□□□□□ -0.62
SMIM12-204ENST00000446026 DOT1LQ8TEK3 1739 aa11.2□□□□□ -0.62
SMIM12-204ENST00000446026 EVA1CP58658 441 aa11.2□□□□□ -0.62
SMIM12-204ENST00000446026 ZC3H6P61129 1189 aaKnown RBP11.2□□□□□ -0.62
SMIM12-204ENST00000446026 FAM98CQ17RN3 349 aaKnown RBP11.19□□□□□ -0.62
SMIM12-204ENST00000446026 LARP1Q6PKG0 1096 aaKnown RBP11.19□□□□□ -0.62
SMIM12-204ENST00000446026 COG3Q96JB2 828 aa11.19□□□□□ -0.62
SMIM12-204ENST00000446026 CHRNA2Q15822 529 aa11.18□□□□□ -0.62
SMIM12-204ENST00000446026 NME9Q86XW9 330 aa11.18□□□□□ -0.62
SMIM12-204ENST00000446026 FLT4P35916 1363 aa11.18□□□□□ -0.62
SMIM12-204ENST00000446026 U2SURPO15042 1029 aaKnown RBP11.17□□□□□ -0.62
SMIM12-204ENST00000446026 BAG6P46379 1132 aa11.17□□□□□ -0.62
SMIM12-204ENST00000446026 CCDC9Q9Y3X0 531 aaKnown RBP11.17□□□□□ -0.62
SMIM12-204ENST00000446026 ERBB4Q15303 1308 aa11.17□□□□□ -0.62
SMIM12-204ENST00000446026 SF3B2Q13435 895 aaKnown RBP11.17□□□□□ -0.62
SMIM12-204ENST00000446026 GGNBP2Q9H3C7 697 aa11.17□□□□□ -0.62
SMIM12-204ENST00000446026 MAPK8IP3Q9UPT6 1336 aa11.17□□□□□ -0.62
SMIM12-204ENST00000446026 FBLN1P23142 703 aa11.17□□□□□ -0.62
SMIM12-204ENST00000446026 NUTM2GQ5VZR2 741 aa11.17□□□□□ -0.62
SMIM12-204ENST00000446026 TBC1D2Q9BYX2 928 aa11.16□□□□□ -0.62
SMIM12-204ENST00000446026 ESPNB1AK53 854 aa11.16□□□□□ -0.62
SMIM12-204ENST00000446026 FYB1O15117 783 aa11.15□□□□□ -0.62
SMIM12-204ENST00000446026 EXOSC9Q06265 439 aaKnown RBP11.15□□□□□ -0.62
SMIM12-204ENST00000446026 AXIN2Q9Y2T1 843 aa11.15□□□□□ -0.62
SMIM12-204ENST00000446026 ADAMTS7Q9UKP4 1686 aa11.15□□□□□ -0.62
SMIM12-204ENST00000446026 FSD2A1L4K1 749 aa11.15□□□□□ -0.62
SMIM12-204ENST00000446026 TPM2P07951 284 aa11.15□□□□□ -0.62
SMIM12-204ENST00000446026 FTSJ3Q8IY81 847 aaKnown RBP11.15□□□□□ -0.62
SMIM12-204ENST00000446026 STRN4Q9NRL3 753 aa11.15□□□□□ -0.62
SMIM12-204ENST00000446026 ITGB4P16144 1822 aa11.15□□□□□ -0.63
SMIM12-204ENST00000446026 TOGARAM1Q9Y4F4 1720 aa11.15□□□□□ -0.63
SMIM12-204ENST00000446026 HMGB2P26583 209 aaKnown RBP11.14□□□□□ -0.63
SMIM12-204ENST00000446026 MFAP1P55081 439 aaKnown RBP11.14□□□□□ -0.63
SMIM12-204ENST00000446026 ANTXR1Q9H6X2 564 aa11.14□□□□□ -0.63
SMIM12-204ENST00000446026 HOXC9P31274 260 aa11.14□□□□□ -0.63
SMIM12-204ENST00000446026 TBC1D32Q96NH3 1257 aa11.14□□□□□ -0.63
SMIM12-204ENST00000446026 BCL11BQ9C0K0 894 aaPredicted RBP11.14□□□□□ -0.63
SMIM12-204ENST00000446026 SMC4Q9NTJ3 1288 aa11.14□□□□□ -0.63
SMIM12-204ENST00000446026 MAP3K19Q56UN5 1328 aa11.14□□□□□ -0.63
SMIM12-204ENST00000446026 PLSCR1O15162 318 aa11.13□□□□□ -0.63
SMIM12-204ENST00000446026 TRIM27P14373 513 aa11.13□□□□□ -0.63
SMIM12-204ENST00000446026 MVPQ14764 893 aaKnown RBP11.13□□□□□ -0.63
SMIM12-204ENST00000446026 TOM1L2Q6ZVM7 507 aa11.13□□□□□ -0.63
SMIM12-204ENST00000446026 TAF1LQ8IZX4 1826 aa11.13□□□□□ -0.63
SMIM12-204ENST00000446026 ITPRIPQ8IWB1 547 aa11.13□□□□□ -0.63
SMIM12-204ENST00000446026 WDR63Q8IWG1 891 aa11.13□□□□□ -0.63
SMIM12-204ENST00000446026 SSH1Q8WYL5 1049 aa11.13□□□□□ -0.63
SMIM12-204ENST00000446026 DDB1Q16531 1140 aa11.13□□□□□ -0.63
SMIM12-204ENST00000446026 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.13□□□□□ -0.63
SMIM12-204ENST00000446026 ANKRD24Q8TF21 1146 aa11.13□□□□□ -0.63
SMIM12-204ENST00000446026 CFAP53Q96M91 514 aa11.13□□□□□ -0.63
SMIM12-204ENST00000446026 ZRANB1Q9UGI0 708 aa11.13□□□□□ -0.63
SMIM12-204ENST00000446026 BECN1Q14457 450 aa11.12□□□□□ -0.63
SMIM12-204ENST00000446026 DZIP1LQ8IYY4 767 aaKnown RBP11.12□□□□□ -0.63
SMIM12-204ENST00000446026 IL2RBP14784 551 aa11.12□□□□□ -0.63
SMIM12-204ENST00000446026 ZKSCAN2Q63HK3 967 aa11.12□□□□□ -0.63
SMIM12-204ENST00000446026 CAMKK2Q96RR4 588 aa11.12□□□□□ -0.63
SMIM12-204ENST00000446026 TUBGCP6Q96RT7 1819 aa11.11□□□□□ -0.63
SMIM12-204ENST00000446026 C5P01031 1676 aa11.11□□□□□ -0.63
SMIM12-204ENST00000446026 KIAA1211Q6ZU35 1233 aa11.11□□□□□ -0.63
SMIM12-204ENST00000446026 NGEFQ8N5V2 710 aa11.11□□□□□ -0.63
SMIM12-204ENST00000446026 ARID3AQ99856 593 aa11.11□□□□□ -0.63
SMIM12-204ENST00000446026 RWDD1Q9H446 243 aaPredicted RBP11.11□□□□□ -0.63
SMIM12-204ENST00000446026 MYH16Q9H6N6 1097 aa11.11□□□□□ -0.63
SMIM12-204ENST00000446026 TRIM35Q9UPQ4 493 aa11.11□□□□□ -0.63
SMIM12-204ENST00000446026 NOB1Q9ULX3 412 aaKnown RBP11.11□□□□□ -0.63
SMIM12-204ENST00000446026 MEGF6O75095 1541 aa11.11□□□□□ -0.63
SMIM12-204ENST00000446026 UPF2Q9HAU5 1272 aaKnown RBP11.1□□□□□ -0.63
SMIM12-204ENST00000446026 TMPOP42166 694 aaKnown RBP11.1□□□□□ -0.63
SMIM12-204ENST00000446026 ZHX1Q9UKY1 873 aaPredicted RBP11.1□□□□□ -0.63
SMIM12-204ENST00000446026 SCN11AQ9UI33 1791 aa11.09□□□□□ -0.63
SMIM12-204ENST00000446026 TMEM57Q8N5G2 664 aa11.09□□□□□ -0.63
SMIM12-204ENST00000446026 TRIM44Q96DX7 344 aaPredicted RBP11.09□□□□□ -0.63
SMIM12-204ENST00000446026 PLEKHF1Q96S99 279 aa11.09□□□□□ -0.63
SMIM12-204ENST00000446026 THUMPD2Q9BTF0 503 aaKnown RBP11.09□□□□□ -0.63
SMIM12-204ENST00000446026 MRE11P49959 708 aa11.08□□□□□ -0.63
SMIM12-204ENST00000446026 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.08□□□□□ -0.63
SMIM12-204ENST00000446026 EXOC5O00471 708 aa11.08□□□□□ -0.64
SMIM12-204ENST00000446026 CCDC27Q2M243 656 aa11.08□□□□□ -0.64
SMIM12-204ENST00000446026 C22orf23Q9BZE7 217 aa11.08□□□□□ -0.64
SMIM12-204ENST00000446026 C1orf115Q9H7X2 142 aa11.08□□□□□ -0.64
SMIM12-204ENST00000446026 CSB-PGBD3P0DP91 1061 aa11.08□□□□□ -0.64
SMIM12-204ENST00000446026 RIPK4P57078 832 aa11.08□□□□□ -0.64
SMIM12-204ENST00000446026 LNPKQ9C0E8 428 aa11.08□□□□□ -0.64
SMIM12-204ENST00000446026 FAM13BQ9NYF5 915 aa11.08□□□□□ -0.64
SMIM12-204ENST00000446026 MARCH10Q8NA82 808 aaPredicted RBP11.07□□□□□ -0.64
SMIM12-204ENST00000446026 GRPEL1Q9HAV7 217 aa11.07□□□□□ -0.64
SMIM12-204ENST00000446026 COL5A3P25940 1745 aaPredicted RBP11.07□□□□□ -0.64
SMIM12-204ENST00000446026 ELL2O00472 640 aaPredicted RBP11.07□□□□□ -0.64
SMIM12-204ENST00000446026 PDIA4P13667 645 aaKnown RBP11.07□□□□□ -0.64
SMIM12-204ENST00000446026 ATF7IPQ6VMQ6 1270 aa11.07□□□□□ -0.64
SMIM12-204ENST00000446026 PRDM10Q9NQV6 1147 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms