RNA–Protein interactions for RNA: ENST00000445866.6

SGCE-206, Transcript of sarcoglycan epsilon, humanhuman

TSL 5 BASIC

Gene SGCE, Length 1,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-206ENST00000445866 PARP4Q9UKK3 1724 aaKnown RBP22.65■■□□□ 1.22
SGCE-206ENST00000445866 BABAM1Q9NWV8 329 aa22.65■■□□□ 1.22
SGCE-206ENST00000445866 THSD7AQ9UPZ6 1657 aa22.64■■□□□ 1.22
SGCE-206ENST00000445866 SLC39A6Q13433 755 aa22.63■■□□□ 1.21
SGCE-206ENST00000445866 TSR2Q969E8 191 aaKnown RBP22.63■■□□□ 1.21
SGCE-206ENST00000445866 MBIPQ9NS73 344 aa22.63■■□□□ 1.21
SGCE-206ENST00000445866 PTF1AQ7RTS3 328 aa22.62■■□□□ 1.21
SGCE-206ENST00000445866 PKD1L3Q7Z443 1732 aa22.61■■□□□ 1.21
SGCE-206ENST00000445866 KCNQ3O43525 872 aa22.61■■□□□ 1.21
SGCE-206ENST00000445866 TRIM37O94972 964 aa22.61■■□□□ 1.21
SGCE-206ENST00000445866 BCL11BQ9C0K0 894 aaPredicted RBP22.61■■□□□ 1.21
SGCE-206ENST00000445866 ASAP1Q9ULH1 1129 aa22.61■■□□□ 1.21
SGCE-206ENST00000445866 BCL9O00512 1426 aa22.6■■□□□ 1.21
SGCE-206ENST00000445866 ZNF790Q6PG37 636 aa22.6■■□□□ 1.21
SGCE-206ENST00000445866 TRMT2AQ8IZ69 625 aaKnown RBP22.6■■□□□ 1.21
SGCE-206ENST00000445866 TTC5Q8N0Z6 440 aa22.6■■□□□ 1.21
SGCE-206ENST00000445866 LRRC37A3O60309 1634 aa22.6■■□□□ 1.21
SGCE-206ENST00000445866 ATG3Q9NT62 314 aa22.59■■□□□ 1.21
SGCE-206ENST00000445866 DUSP27Q5VZP5 1158 aa22.58■■□□□ 1.2
SGCE-206ENST00000445866 FANCIQ9NVI1 1328 aa22.57■■□□□ 1.2
SGCE-206ENST00000445866 PTCD1O75127 700 aaKnown RBP22.56■■□□□ 1.2
SGCE-206ENST00000445866 EIF4A1P60842 406 aaKnown RBP22.55■■□□□ 1.2
SGCE-206ENST00000445866 EXOSC9Q06265 439 aaKnown RBP22.55■■□□□ 1.2
SGCE-206ENST00000445866 SMARCC1Q92922 1105 aaPredicted RBP22.55■■□□□ 1.2
SGCE-206ENST00000445866 ELL2O00472 640 aaPredicted RBP22.54■■□□□ 1.2
SGCE-206ENST00000445866 ZNF496Q96IT1 587 aaPredicted RBP22.54■■□□□ 1.2
SGCE-206ENST00000445866 RBM42Q9BTD8 480 aaKnown RBP22.54■■□□□ 1.2
SGCE-206ENST00000445866 FMNL2Q96PY5 1086 aa22.53■■□□□ 1.2
SGCE-206ENST00000445866 KRT24Q2M2I5 525 aa22.52■■□□□ 1.2
SGCE-206ENST00000445866 C8orf58Q8NAV2 365 aa22.52■■□□□ 1.2
SGCE-206ENST00000445866 WNK3Q9BYP7 1800 aa22.51■■□□□ 1.19
SGCE-206ENST00000445866 APBA3O96018 575 aa22.51■■□□□ 1.19
SGCE-206ENST00000445866 SHANK3Q9BYB0 1731 aa22.5■■□□□ 1.19
SGCE-206ENST00000445866 TSPYL6Q8N831 410 aa22.49■■□□□ 1.19
SGCE-206ENST00000445866 MRC1P22897 1456 aa22.49■■□□□ 1.19
SGCE-206ENST00000445866 SNRPA1P09661 255 aaKnown RBP22.49■■□□□ 1.19
SGCE-206ENST00000445866 GIGYF1O75420 1035 aaPredicted RBP22.48■■□□□ 1.19
SGCE-206ENST00000445866 TWISTNBQ3B726 338 aaPredicted RBP22.48■■□□□ 1.19
SGCE-206ENST00000445866 LOC102724428A0A0B4J2F2 783 aa22.47■■□□□ 1.19
SGCE-206ENST00000445866 SIK1P57059 783 aa22.47■■□□□ 1.19
SGCE-206ENST00000445866 SF3B2Q13435 895 aaKnown RBP22.47■■□□□ 1.19
SGCE-206ENST00000445866 PALLDQ8WX93 1383 aa22.47■■□□□ 1.19
SGCE-206ENST00000445866 VAMP4O75379 141 aa22.46■■□□□ 1.19
SGCE-206ENST00000445866 ATP6V1AP38606 617 aa22.46■■□□□ 1.19
SGCE-206ENST00000445866 VSIG10Q8N0Z9 540 aa22.46■■□□□ 1.19
SGCE-206ENST00000445866 ADAMTS7Q9UKP4 1686 aa22.45■■□□□ 1.18
SGCE-206ENST00000445866 PRAMEF22A3QJZ6 481 aa22.45■■□□□ 1.18
SGCE-206ENST00000445866 EIF2S2P20042 333 aaKnown RBP22.45■■□□□ 1.18
SGCE-206ENST00000445866 SLC4A9Q96Q91 983 aa22.45■■□□□ 1.18
SGCE-206ENST00000445866 TEX13AQ9BXU3 409 aaPredicted RBP22.45■■□□□ 1.18
SGCE-206ENST00000445866 PLSCR1O15162 318 aa22.44■■□□□ 1.18
SGCE-206ENST00000445866 DLG5Q8TDM6 1919 aa22.44■■□□□ 1.18
SGCE-206ENST00000445866 USP16Q9Y5T5 823 aa22.43■■□□□ 1.18
SGCE-206ENST00000445866 HEG1Q9ULI3 1381 aa22.43■■□□□ 1.18
SGCE-206ENST00000445866 CT47B1P0C2W7 299 aaPredicted RBP22.42■■□□□ 1.18
SGCE-206ENST00000445866 KCNQ4P56696 695 aa22.42■■□□□ 1.18
SGCE-206ENST00000445866 ILDR2Q71H61 639 aa22.42■■□□□ 1.18
SGCE-206ENST00000445866 DNAJC10Q8IXB1 793 aa22.42■■□□□ 1.18
SGCE-206ENST00000445866 NECTIN2Q92692 538 aa22.42■■□□□ 1.18
SGCE-206ENST00000445866 EP400Q96L91 3159 aa22.42■■□□□ 1.18
SGCE-206ENST00000445866 HOXB7P09629 217 aa22.42■■□□□ 1.18
SGCE-206ENST00000445866 CCDC125Q86Z20 511 aa22.42■■□□□ 1.18
SGCE-206ENST00000445866 CHMP4AQ9BY43 222 aa22.42■■□□□ 1.18
SGCE-206ENST00000445866 CCNL1Q9UK58 526 aaPredicted RBP22.42■■□□□ 1.18
SGCE-206ENST00000445866 STARD3NLO95772 234 aa22.41■■□□□ 1.18
SGCE-206ENST00000445866 SOS1Q07889 1333 aaPredicted RBP22.41■■□□□ 1.18
SGCE-206ENST00000445866 BRWD3Q6RI45 1802 aa22.4■■□□□ 1.18
SGCE-206ENST00000445866 CENPBP07199 599 aaPredicted RBP22.4■■□□□ 1.18
SGCE-206ENST00000445866 HDGFL1Q5TGJ6 251 aa22.4■■□□□ 1.18
SGCE-206ENST00000445866 SCN11AQ9UI33 1791 aa22.4■■□□□ 1.18
SGCE-206ENST00000445866 TCERG1O14776 1098 aaKnown RBP22.39■■□□□ 1.18
SGCE-206ENST00000445866 CCDC30Q5VVM6 783 aa22.39■■□□□ 1.18
SGCE-206ENST00000445866 ITPK1Q13572 414 aa22.39■■□□□ 1.17
SGCE-206ENST00000445866 TXNRD1Q16881 649 aa22.39■■□□□ 1.17
SGCE-206ENST00000445866 PROM2Q8N271 834 aa22.39■■□□□ 1.17
SGCE-206ENST00000445866 TOGARAM1Q9Y4F4 1720 aa22.39■■□□□ 1.17
SGCE-206ENST00000445866 BAG6P46379 1132 aa22.38■■□□□ 1.17
SGCE-206ENST00000445866 EN1Q05925 392 aaPredicted RBP22.38■■□□□ 1.17
SGCE-206ENST00000445866 SLC27A3Q5K4L6 730 aa22.38■■□□□ 1.17
SGCE-206ENST00000445866 ZNF428Q96B54 188 aa22.38■■□□□ 1.17
SGCE-206ENST00000445866 CYP19A1P11511 503 aaPredicted RBP22.37■■□□□ 1.17
SGCE-206ENST00000445866 A1BGP04217 495 aa22.36■■□□□ 1.17
SGCE-206ENST00000445866 RARSP54136 660 aaKnown RBP22.36■■□□□ 1.17
SGCE-206ENST00000445866 LRRC4BQ9NT99 713 aa22.36■■□□□ 1.17
SGCE-206ENST00000445866 RCAN3Q9UKA8 241 aa22.36■■□□□ 1.17
SGCE-206ENST00000445866 UPF1Q92900 1129 aaKnown RBP eCLIP22.36■■□□□ 1.17
SGCE-206ENST00000445866 STK31Q9BXU1 1019 aa22.36■■□□□ 1.17
SGCE-206ENST00000445866 SLC4A2P04920 1241 aa22.35■■□□□ 1.17
SGCE-206ENST00000445866 DEFB132Q7Z7B7 95 aa22.35■■□□□ 1.17
SGCE-206ENST00000445866 SSH1Q8WYL5 1049 aa22.35■■□□□ 1.17
SGCE-206ENST00000445866 CAMKK2Q96RR4 588 aa22.35■■□□□ 1.17
SGCE-206ENST00000445866 DOT1LQ8TEK3 1739 aa22.35■■□□□ 1.17
SGCE-206ENST00000445866 EZH2Q15910 746 aaKnown RBP22.34■■□□□ 1.17
SGCE-206ENST00000445866 KAT6BQ8WYB5 2073 aa22.34■■□□□ 1.17
SGCE-206ENST00000445866 KCPQ6ZWJ8 1503 aa22.34■■□□□ 1.17
SGCE-206ENST00000445866 ALDH1L2Q3SY69 923 aa22.33■■□□□ 1.17
SGCE-206ENST00000445866 LINC00116Q8NCU8 138 aa22.33■■□□□ 1.17
SGCE-206ENST00000445866 BCL2L13Q9BXK5 485 aa22.33■■□□□ 1.17
SGCE-206ENST00000445866 HMGB2P26583 209 aaKnown RBP22.33■■□□□ 1.16
SGCE-206ENST00000445866 SMC4Q9NTJ3 1288 aa22.33■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms