RNA–Protein interactions for RNA: ENST00000445336.2

BRAFP1-201, Transcript of BRAF pseudogene 1, humanhuman

BASIC

Gene BRAFP1, Length 2,703 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP1-201ENST00000445336 NGDNQ8NEJ9 315 aaKnown RBP10.04□□□□□ -0.8
BRAFP1-201ENST00000445336 AKAP4Q5JQC9 854 aa10.03□□□□□ -0.8
BRAFP1-201ENST00000445336 NLGN1Q8N2Q7 840 aa10.03□□□□□ -0.8
BRAFP1-201ENST00000445336 FER1L6Q2WGJ9 1857 aa10.03□□□□□ -0.8
BRAFP1-201ENST00000445336 RGPD5Q99666 1765 aa10.01□□□□□ -0.81
BRAFP1-201ENST00000445336 ACEP12821 1306 aa10.01□□□□□ -0.81
BRAFP1-201ENST00000445336 USP47Q96K76 1375 aa10□□□□□ -0.81
BRAFP1-201ENST00000445336 ACSBG1Q96GR2 724 aa10□□□□□ -0.81
BRAFP1-201ENST00000445336 TAF1DQ9H5J8 278 aaPredicted RBP10□□□□□ -0.81
BRAFP1-201ENST00000445336 AKAP11Q9UKA4 1901 aa10□□□□□ -0.81
BRAFP1-201ENST00000445336 PRO3102Q9H379 93 aa10□□□□□ -0.81
BRAFP1-201ENST00000445336 ARFGEF2Q9Y6D5 1785 aa10□□□□□ -0.81
BRAFP1-201ENST00000445336 A0A0G2JLW4 131 aa9.99□□□□□ -0.81
BRAFP1-201ENST00000445336 PLEKHG3A1L390 1219 aa9.99□□□□□ -0.81
BRAFP1-201ENST00000445336 PAK3O75914 559 aaPredicted RBP9.99□□□□□ -0.81
BRAFP1-201ENST00000445336 FOXK2Q01167 660 aa9.99□□□□□ -0.81
BRAFP1-201ENST00000445336 ABT1Q9ULW3 272 aaKnown RBP9.99□□□□□ -0.81
BRAFP1-201ENST00000445336 PDZRN3Q9UPQ7 1066 aa9.99□□□□□ -0.81
BRAFP1-201ENST00000445336 IL2RBP14784 551 aa9.99□□□□□ -0.81
BRAFP1-201ENST00000445336 NOGQ13253 232 aa9.99□□□□□ -0.81
BRAFP1-201ENST00000445336 ADRA2BP18089 450 aa9.98□□□□□ -0.81
BRAFP1-201ENST00000445336 NRXN2Q9P2S2 1712 aa9.98□□□□□ -0.81
BRAFP1-201ENST00000445336 MAP2P11137 1827 aaKnown RBP9.98□□□□□ -0.81
BRAFP1-201ENST00000445336 PLEKHG5O94827 1062 aa9.98□□□□□ -0.81
BRAFP1-201ENST00000445336 FBXO46Q6PJ61 603 aaPredicted RBP9.98□□□□□ -0.81
BRAFP1-201ENST00000445336 DDX21Q9NR30 783 aaKnown RBP eCLIP9.98□□□□□ -0.81
BRAFP1-201ENST00000445336 SMARCC1Q92922 1105 aaPredicted RBP9.98□□□□□ -0.81
BRAFP1-201ENST00000445336 AK7Q96M32 723 aa9.97□□□□□ -0.81
BRAFP1-201ENST00000445336 ADGRB1O14514 1584 aa9.97□□□□□ -0.81
BRAFP1-201ENST00000445336 WASLO00401 505 aaPredicted RBP9.96□□□□□ -0.81
BRAFP1-201ENST00000445336 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.96□□□□□ -0.81
BRAFP1-201ENST00000445336 PAPPA2Q9BXP8 1791 aa9.96□□□□□ -0.82
BRAFP1-201ENST00000445336 NUP155O75694 1391 aa9.96□□□□□ -0.82
BRAFP1-201ENST00000445336 MMP10P09238 476 aa9.96□□□□□ -0.82
BRAFP1-201ENST00000445336 KCNH5Q8NCM2 988 aa9.95□□□□□ -0.82
BRAFP1-201ENST00000445336 BCORQ6W2J9 1755 aa9.95□□□□□ -0.82
BRAFP1-201ENST00000445336 CNTROBQ8N137 903 aa9.95□□□□□ -0.82
BRAFP1-201ENST00000445336 P2RX7Q99572 595 aaKnown RBP9.95□□□□□ -0.82
BRAFP1-201ENST00000445336 ARHGEF25Q86VW2 580 aa9.93□□□□□ -0.82
BRAFP1-201ENST00000445336 NFAT5O94916 1531 aa9.93□□□□□ -0.82
BRAFP1-201ENST00000445336 C14orf93Q9H972 538 aaKnown RBP9.93□□□□□ -0.82
BRAFP1-201ENST00000445336 CABP2Q9NPB3 220 aa9.93□□□□□ -0.82
BRAFP1-201ENST00000445336 PARP3Q9Y6F1 533 aa9.93□□□□□ -0.82
BRAFP1-201ENST00000445336 CAPN2P17655 700 aa9.92□□□□□ -0.82
BRAFP1-201ENST00000445336 HACL1Q9UJ83 578 aa9.92□□□□□ -0.82
BRAFP1-201ENST00000445336 ERBB3P21860 1342 aa9.92□□□□□ -0.82
BRAFP1-201ENST00000445336 CYP4F22Q6NT55 531 aa9.92□□□□□ -0.82
BRAFP1-201ENST00000445336 ABTB2Q8N961 1025 aa9.92□□□□□ -0.82
BRAFP1-201ENST00000445336 SCN11AQ9UI33 1791 aa9.92□□□□□ -0.82
BRAFP1-201ENST00000445336 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.91□□□□□ -0.82
BRAFP1-201ENST00000445336 STK26Q9P289 416 aa9.91□□□□□ -0.82
BRAFP1-201ENST00000445336 FMR1Q06787 632 aaKnown RBP eCLIP9.91□□□□□ -0.82
BRAFP1-201ENST00000445336 RGS20O76081 388 aa9.9□□□□□ -0.82
BRAFP1-201ENST00000445336 TMF1P82094 1093 aa9.9□□□□□ -0.82
BRAFP1-201ENST00000445336 RASSF7Q02833 373 aa9.89□□□□□ -0.83
BRAFP1-201ENST00000445336 SOGA3Q5TF21 947 aa9.89□□□□□ -0.83
BRAFP1-201ENST00000445336 CGNL1Q0VF96 1302 aa9.89□□□□□ -0.83
BRAFP1-201ENST00000445336 MAP3K19Q56UN5 1328 aa9.88□□□□□ -0.83
BRAFP1-201ENST00000445336 POTEIP0CG38 1075 aa9.88□□□□□ -0.83
BRAFP1-201ENST00000445336 POTEJP0CG39 1038 aa9.88□□□□□ -0.83
BRAFP1-201ENST00000445336 PRAM1Q96QH2 718 aa9.88□□□□□ -0.83
BRAFP1-201ENST00000445336 CFHR5Q9BXR6 569 aa9.88□□□□□ -0.83
BRAFP1-201ENST00000445336 TSKSQ9UJT2 592 aa9.88□□□□□ -0.83
BRAFP1-201ENST00000445336 PALLDQ8WX93 1383 aa9.87□□□□□ -0.83
BRAFP1-201ENST00000445336 AOC2O75106 756 aa9.87□□□□□ -0.83
BRAFP1-201ENST00000445336 FAM109BQ6ICB4 259 aaPredicted RBP9.87□□□□□ -0.83
BRAFP1-201ENST00000445336 NFKBIEO00221 500 aa9.87□□□□□ -0.83
BRAFP1-201ENST00000445336 EPHX2P34913 555 aa9.87□□□□□ -0.83
BRAFP1-201ENST00000445336 SAPCD2Q86UD0 394 aa9.87□□□□□ -0.83
BRAFP1-201ENST00000445336 ADGRF5Q8IZF2 1346 aa9.86□□□□□ -0.83
BRAFP1-201ENST00000445336 CSB-PGBD3P0DP91 1061 aa9.86□□□□□ -0.83
BRAFP1-201ENST00000445336 PRIM1P49642 420 aaKnown RBP9.86□□□□□ -0.83
BRAFP1-201ENST00000445336 CIAPIN1Q6FI81 312 aa9.86□□□□□ -0.83
BRAFP1-201ENST00000445336 COL5A3P25940 1745 aaPredicted RBP9.86□□□□□ -0.83
BRAFP1-201ENST00000445336 RC3H1Q5TC82 1133 aaKnown RBP9.86□□□□□ -0.83
BRAFP1-201ENST00000445336 CCDC102AQ96A19 550 aa9.86□□□□□ -0.83
BRAFP1-201ENST00000445336 TNFRSF10AO00220 468 aa9.85□□□□□ -0.83
BRAFP1-201ENST00000445336 NBPF1Q3BBV0 1214 aa9.85□□□□□ -0.83
BRAFP1-201ENST00000445336 USP31Q70CQ4 1352 aa9.85□□□□□ -0.83
BRAFP1-201ENST00000445336 NUDT16Q96DE0 195 aaKnown RBP9.85□□□□□ -0.83
BRAFP1-201ENST00000445336 ERFEQ4G0M1 354 aa9.84□□□□□ -0.83
BRAFP1-201ENST00000445336 POGKQ9P215 609 aa9.84□□□□□ -0.83
BRAFP1-201ENST00000445336 AXIN2Q9Y2T1 843 aa9.84□□□□□ -0.83
BRAFP1-201ENST00000445336 ARMC5Q96C12 935 aa9.84□□□□□ -0.83
BRAFP1-201ENST00000445336 RNF186Q9NXI6 227 aa9.84□□□□□ -0.83
BRAFP1-201ENST00000445336 RBM27Q9P2N5 1060 aaKnown RBP9.84□□□□□ -0.83
BRAFP1-201ENST00000445336 ITGB4P16144 1822 aa9.84□□□□□ -0.83
BRAFP1-201ENST00000445336 TTLL6Q8N841 843 aa9.84□□□□□ -0.84
BRAFP1-201ENST00000445336 UTRNP46939 3433 aa9.83□□□□□ -0.84
BRAFP1-201ENST00000445336 H0YGN5 161 aa9.83□□□□□ -0.84
BRAFP1-201ENST00000445336 PAXIP1Q6ZW49 1069 aaPredicted RBP9.83□□□□□ -0.84
BRAFP1-201ENST00000445336 USP50Q70EL3 339 aaPredicted RBP9.83□□□□□ -0.84
BRAFP1-201ENST00000445336 CCDC61Q9Y6R9 512 aa9.83□□□□□ -0.84
BRAFP1-201ENST00000445336 TTC21AQ8NDW8 1320 aa9.83□□□□□ -0.84
BRAFP1-201ENST00000445336 KDM3BQ7LBC6 1761 aa9.82□□□□□ -0.84
BRAFP1-201ENST00000445336 CUL9Q8IWT3 2517 aa9.82□□□□□ -0.84
BRAFP1-201ENST00000445336 MAP3K12Q12852 859 aa9.82□□□□□ -0.84
BRAFP1-201ENST00000445336 CST9Q5W186 159 aa9.82□□□□□ -0.84
BRAFP1-201ENST00000445336 BMP8BP34820 402 aa9.82□□□□□ -0.84
BRAFP1-201ENST00000445336 MTMR10Q9NXD2 777 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms