RNA–Protein interactions for RNA: ENST00000444997.1

PDCD4-203, Transcript of programmed cell death 4, humanhuman

TSL 3

Gene PDCD4, Length 819 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-203ENST00000444997 KDM6AO15550 1401 aaPredicted RBP23.43■■□□□ 1.34
PDCD4-203ENST00000444997 LINC00116Q8NCU8 138 aa23.43■■□□□ 1.34
PDCD4-203ENST00000444997 CFAP53Q96M91 514 aa23.43■■□□□ 1.34
PDCD4-203ENST00000444997 U2SURPO15042 1029 aaKnown RBP23.42■■□□□ 1.34
PDCD4-203ENST00000444997 PHF14O94880 888 aa23.42■■□□□ 1.34
PDCD4-203ENST00000444997 MAP3K5Q99683 1374 aa23.41■■□□□ 1.34
PDCD4-203ENST00000444997 TUBGCP6Q96RT7 1819 aa23.41■■□□□ 1.34
PDCD4-203ENST00000444997 SSFA2P28290 1259 aa23.41■■□□□ 1.34
PDCD4-203ENST00000444997 ITPK1Q13572 414 aa23.41■■□□□ 1.34
PDCD4-203ENST00000444997 NFATC2IPQ8NCF5 419 aa23.41■■□□□ 1.34
PDCD4-203ENST00000444997 C4BP0C0L5 1744 aa23.41■■□□□ 1.34
PDCD4-203ENST00000444997 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.4■■□□□ 1.34
PDCD4-203ENST00000444997 MSL1Q68DK7 614 aa23.4■■□□□ 1.34
PDCD4-203ENST00000444997 GNPATO15228 680 aa23.39■■□□□ 1.33
PDCD4-203ENST00000444997 TAF1LQ8IZX4 1826 aa23.38■■□□□ 1.33
PDCD4-203ENST00000444997 MTHFSDQ2M296 383 aaKnown RBP23.37■■□□□ 1.33
PDCD4-203ENST00000444997 PTCD1O75127 700 aaKnown RBP23.36■■□□□ 1.33
PDCD4-203ENST00000444997 YY1P25490 414 aa23.36■■□□□ 1.33
PDCD4-203ENST00000444997 NUDCQ9Y266 331 aa23.36■■□□□ 1.33
PDCD4-203ENST00000444997 SLC52A2Q9HAB3 445 aa23.35■■□□□ 1.33
PDCD4-203ENST00000444997 LGR6Q9HBX8 967 aa23.35■■□□□ 1.33
PDCD4-203ENST00000444997 RTCBQ9Y3I0 505 aaKnown RBP23.35■■□□□ 1.33
PDCD4-203ENST00000444997 COL3A1P02461 1466 aaPredicted RBP23.35■■□□□ 1.33
PDCD4-203ENST00000444997 RNMTO43148 476 aaKnown RBP23.34■■□□□ 1.33
PDCD4-203ENST00000444997 PPP2R1AP30153 589 aa23.34■■□□□ 1.33
PDCD4-203ENST00000444997 RC3H1Q5TC82 1133 aaKnown RBP23.34■■□□□ 1.33
PDCD4-203ENST00000444997 SMIM5Q71RC9 77 aa23.34■■□□□ 1.33
PDCD4-203ENST00000444997 AMIGO3Q86WK7 504 aa23.34■■□□□ 1.33
PDCD4-203ENST00000444997 SLC4A9Q96Q91 983 aa23.34■■□□□ 1.33
PDCD4-203ENST00000444997 TRAPPC3LQ5T215 181 aa23.33■■□□□ 1.33
PDCD4-203ENST00000444997 COL24A1Q17RW2 1714 aa23.33■■□□□ 1.32
PDCD4-203ENST00000444997 GPR162Q16538 588 aa23.32■■□□□ 1.32
PDCD4-203ENST00000444997 GAS2L2Q8NHY3 880 aa23.32■■□□□ 1.32
PDCD4-203ENST00000444997 CNTNAP4Q9C0A0 1308 aa23.31■■□□□ 1.32
PDCD4-203ENST00000444997 ADRA2BP18089 450 aa23.3■■□□□ 1.32
PDCD4-203ENST00000444997 PELP1Q8IZL8 1130 aaKnown RBP23.29■■□□□ 1.32
PDCD4-203ENST00000444997 ZNF831Q5JPB2 1677 aa23.28■■□□□ 1.32
PDCD4-203ENST00000444997 UBR3Q6ZT12 1888 aa23.28■■□□□ 1.32
PDCD4-203ENST00000444997 GNAT3A8MTJ3 354 aa23.28■■□□□ 1.32
PDCD4-203ENST00000444997 RPS6KA4O75676 772 aa23.28■■□□□ 1.32
PDCD4-203ENST00000444997 U2AF1L5P0DN76 240 aaPredicted RBP23.28■■□□□ 1.32
PDCD4-203ENST00000444997 U2AF1Q01081 240 aaKnown RBP eCLIP23.28■■□□□ 1.32
PDCD4-203ENST00000444997 NLGN2Q8NFZ4 835 aa23.28■■□□□ 1.32
PDCD4-203ENST00000444997 CD2APQ9Y5K6 639 aa23.28■■□□□ 1.32
PDCD4-203ENST00000444997 RFC4P35249 363 aa23.27■■□□□ 1.32
PDCD4-203ENST00000444997 SCN11AQ9UI33 1791 aa23.27■■□□□ 1.32
PDCD4-203ENST00000444997 PRKAR2BP31323 418 aa23.26■■□□□ 1.31
PDCD4-203ENST00000444997 CRKLP46109 303 aaKnown RBP23.26■■□□□ 1.31
PDCD4-203ENST00000444997 ARHGEF1Q92888 912 aaKnown RBP23.26■■□□□ 1.31
PDCD4-203ENST00000444997 TEFQ10587 303 aa23.25■■□□□ 1.31
PDCD4-203ENST00000444997 SLC39A6Q13433 755 aa23.25■■□□□ 1.31
PDCD4-203ENST00000444997 NLGN1Q8N2Q7 840 aa23.25■■□□□ 1.31
PDCD4-203ENST00000444997 RSPH6AQ9H0K4 717 aa23.25■■□□□ 1.31
PDCD4-203ENST00000444997 MRC1P22897 1456 aa23.24■■□□□ 1.31
PDCD4-203ENST00000444997 FCHSD2O94868 740 aa23.23■■□□□ 1.31
PDCD4-203ENST00000444997 TTC5Q8N0Z6 440 aa23.23■■□□□ 1.31
PDCD4-203ENST00000444997 PHACTR3Q96KR7 559 aa23.22■■□□□ 1.31
PDCD4-203ENST00000444997 MMP10P09238 476 aa23.21■■□□□ 1.31
PDCD4-203ENST00000444997 DNAJC10Q8IXB1 793 aa23.21■■□□□ 1.31
PDCD4-203ENST00000444997 IL17REQ8NFR9 667 aa23.21■■□□□ 1.31
PDCD4-203ENST00000444997 COL5A3P25940 1745 aaPredicted RBP23.2■■□□□ 1.3
PDCD4-203ENST00000444997 GRIN3BO60391 1043 aa23.2■■□□□ 1.3
PDCD4-203ENST00000444997 VSIG10Q8N0Z9 540 aa23.2■■□□□ 1.3
PDCD4-203ENST00000444997 CCDC87Q9NVE4 849 aa23.2■■□□□ 1.3
PDCD4-203ENST00000444997 NEFMP07197 916 aa23.19■■□□□ 1.3
PDCD4-203ENST00000444997 RTF1Q92541 710 aaKnown RBP23.19■■□□□ 1.3
PDCD4-203ENST00000444997 GYS1P13807 737 aa23.18■■□□□ 1.3
PDCD4-203ENST00000444997 INTS5Q6P9B9 1019 aaKnown RBP23.18■■□□□ 1.3
PDCD4-203ENST00000444997 ADAMTS7Q9UKP4 1686 aa23.18■■□□□ 1.3
PDCD4-203ENST00000444997 CYP19A1P11511 503 aaPredicted RBP23.17■■□□□ 1.3
PDCD4-203ENST00000444997 ZNF790Q6PG37 636 aa23.16■■□□□ 1.3
PDCD4-203ENST00000444997 PARP3Q9Y6F1 533 aa23.16■■□□□ 1.3
PDCD4-203ENST00000444997 ZPR1O75312 459 aa23.15■■□□□ 1.3
PDCD4-203ENST00000444997 STARD3NLO95772 234 aa23.15■■□□□ 1.3
PDCD4-203ENST00000444997 CICQ96RK0 1608 aaPredicted RBP23.15■■□□□ 1.3
PDCD4-203ENST00000444997 KCPQ6ZWJ8 1503 aa23.14■■□□□ 1.3
PDCD4-203ENST00000444997 TJP1Q07157 1748 aa23.14■■□□□ 1.3
PDCD4-203ENST00000444997 YBX3P16989 372 aaKnown RBP eCLIP23.14■■□□□ 1.29
PDCD4-203ENST00000444997 DDX10Q13206 875 aaKnown RBP23.14■■□□□ 1.29
PDCD4-203ENST00000444997 RALBP1Q15311 655 aa23.14■■□□□ 1.29
PDCD4-203ENST00000444997 TEX13AQ9BXU3 409 aaPredicted RBP23.14■■□□□ 1.29
PDCD4-203ENST00000444997 CEMIPQ8WUJ3 1361 aa23.14■■□□□ 1.29
PDCD4-203ENST00000444997 USP42Q9H9J4 1324 aaKnown RBP23.13■■□□□ 1.29
PDCD4-203ENST00000444997 BTBD11A6QL63 1104 aa23.13■■□□□ 1.29
PDCD4-203ENST00000444997 SRP68Q9UHB9 627 aaKnown RBP23.13■■□□□ 1.29
PDCD4-203ENST00000444997 SOS1Q07889 1333 aaPredicted RBP23.12■■□□□ 1.29
PDCD4-203ENST00000444997 HTATSF1O43719 755 aaKnown RBP23.12■■□□□ 1.29
PDCD4-203ENST00000444997 ZNF496Q96IT1 587 aaPredicted RBP23.12■■□□□ 1.29
PDCD4-203ENST00000444997 FMNL2Q96PY5 1086 aa23.12■■□□□ 1.29
PDCD4-203ENST00000444997 PNNQ9H307 717 aaKnown RBP23.12■■□□□ 1.29
PDCD4-203ENST00000444997 MYH14Q7Z406 1995 aaKnown RBP23.11■■□□□ 1.29
PDCD4-203ENST00000444997 MCM10Q7L590 875 aa23.1■■□□□ 1.29
PDCD4-203ENST00000444997 ZBTB1Q9Y2K1 713 aa23.1■■□□□ 1.29
PDCD4-203ENST00000444997 HEG1Q9ULI3 1381 aa23.1■■□□□ 1.29
PDCD4-203ENST00000444997 VIRMAQ69YN4 1812 aaKnown RBP23.1■■□□□ 1.29
PDCD4-203ENST00000444997 CANXP27824 592 aaKnown RBP23.09■■□□□ 1.29
PDCD4-203ENST00000444997 TGFB2P61812 414 aa23.09■■□□□ 1.29
PDCD4-203ENST00000444997 FKBP8Q14318 412 aa23.09■■□□□ 1.29
PDCD4-203ENST00000444997 USPL1Q5W0Q7 1092 aa23.09■■□□□ 1.29
PDCD4-203ENST00000444997 ZNF784Q8NCA9 323 aaPredicted RBP23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms