RNA–Protein interactions for RNA: ENST00000444942.1

LINC00642-203, long intergenic non-protein coding RNA 642, humanhuman

TSL 1 (best)

Gene LINC00642, Length 1,376 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-203ENST00000444942 ZC3H4Q9UPT8 1303 aaKnown RBP12.82□□□□□ -0.36
LINC00642-203ENST00000444942 PHF14O94880 888 aa12.81□□□□□ -0.36
LINC00642-203ENST00000444942 DPEP1P16444 411 aa12.81□□□□□ -0.36
LINC00642-203ENST00000444942 DIEXFQ68CQ4 756 aaKnown RBP12.81□□□□□ -0.36
LINC00642-203ENST00000444942 HDGFL2Q7Z4V5 671 aaPredicted RBP12.81□□□□□ -0.36
LINC00642-203ENST00000444942 MMP10P09238 476 aa12.81□□□□□ -0.36
LINC00642-203ENST00000444942 DCAF5Q96JK2 942 aa12.81□□□□□ -0.36
LINC00642-203ENST00000444942 TIAM2Q8IVF5 1701 aa12.8□□□□□ -0.36
LINC00642-203ENST00000444942 CD163L1Q9NR16 1453 aa12.8□□□□□ -0.36
LINC00642-203ENST00000444942 SSFA2P28290 1259 aa12.8□□□□□ -0.36
LINC00642-203ENST00000444942 ANKRD24Q8TF21 1146 aa12.8□□□□□ -0.36
LINC00642-203ENST00000444942 ZNF692Q9BU19 519 aaPredicted RBP12.8□□□□□ -0.36
LINC00642-203ENST00000444942 TTC21BQ7Z4L5 1316 aa12.8□□□□□ -0.36
LINC00642-203ENST00000444942 A0A1W2PP64 1363 aa12.79□□□□□ -0.36
LINC00642-203ENST00000444942 C4AP0C0L4 1744 aa12.79□□□□□ -0.36
LINC00642-203ENST00000444942 GLTPD2A6NH11 291 aa12.79□□□□□ -0.36
LINC00642-203ENST00000444942 SLC24A1O60721 1099 aa12.79□□□□□ -0.36
LINC00642-203ENST00000444942 KCNA3P22001 575 aa12.79□□□□□ -0.36
LINC00642-203ENST00000444942 TERF2IPQ9NYB0 399 aa12.79□□□□□ -0.36
LINC00642-203ENST00000444942 PALLDQ8WX93 1383 aa12.79□□□□□ -0.36
LINC00642-203ENST00000444942 VEGFBP49765 207 aa12.78□□□□□ -0.36
LINC00642-203ENST00000444942 CDCA8Q53HL2 280 aa12.78□□□□□ -0.36
LINC00642-203ENST00000444942 KDM6AO15550 1401 aaPredicted RBP12.78□□□□□ -0.36
LINC00642-203ENST00000444942 MAP2P11137 1827 aaKnown RBP12.78□□□□□ -0.36
LINC00642-203ENST00000444942 ITGB4P16144 1822 aa12.78□□□□□ -0.36
LINC00642-203ENST00000444942 NME9Q86XW9 330 aa12.77□□□□□ -0.37
LINC00642-203ENST00000444942 TTC21AQ8NDW8 1320 aa12.77□□□□□ -0.37
LINC00642-203ENST00000444942 PUS7Q96PZ0 661 aaKnown RBP12.77□□□□□ -0.37
LINC00642-203ENST00000444942 PIM2Q9P1W9 311 aa12.77□□□□□ -0.37
LINC00642-203ENST00000444942 RGPD2P0DJD1 1756 aa12.76□□□□□ -0.37
LINC00642-203ENST00000444942 POTECB2RU33 542 aa12.76□□□□□ -0.37
LINC00642-203ENST00000444942 KIF20BQ96Q89 1820 aa12.76□□□□□ -0.37
LINC00642-203ENST00000444942 DALRD3Q5D0E6 543 aaKnown RBP12.75□□□□□ -0.37
LINC00642-203ENST00000444942 ZCRB1Q8TBF4 217 aaKnown RBP12.75□□□□□ -0.37
LINC00642-203ENST00000444942 CCDC87Q9NVE4 849 aa12.75□□□□□ -0.37
LINC00642-203ENST00000444942 EDC4Q6P2E9 1401 aaKnown RBP12.74□□□□□ -0.37
LINC00642-203ENST00000444942 CHADLQ6NUI6 762 aa12.74□□□□□ -0.37
LINC00642-203ENST00000444942 CFAP44Q96MT7 982 aa12.74□□□□□ -0.37
LINC00642-203ENST00000444942 PRPF38BQ5VTL8 546 aaKnown RBP12.72□□□□□ -0.37
LINC00642-203ENST00000444942 DICER1Q9UPY3 1922 aaKnown RBP12.72□□□□□ -0.37
LINC00642-203ENST00000444942 PASKQ96RG2 1323 aa12.72□□□□□ -0.37
LINC00642-203ENST00000444942 MEGF6O75095 1541 aa12.71□□□□□ -0.37
LINC00642-203ENST00000444942 MAP2K1Q02750 393 aaPredicted RBP12.71□□□□□ -0.37
LINC00642-203ENST00000444942 NLGN1Q8N2Q7 840 aa12.71□□□□□ -0.37
LINC00642-203ENST00000444942 LMNB1P20700 586 aa12.7□□□□□ -0.38
LINC00642-203ENST00000444942 RASSF7Q02833 373 aa12.7□□□□□ -0.38
LINC00642-203ENST00000444942 SMARCC1Q92922 1105 aaPredicted RBP12.7□□□□□ -0.38
LINC00642-203ENST00000444942 GGNBP2Q9H3C7 697 aa12.7□□□□□ -0.38
LINC00642-203ENST00000444942 THSD7BQ9C0I4 1608 aa12.7□□□□□ -0.38
LINC00642-203ENST00000444942 USP31Q70CQ4 1352 aa12.7□□□□□ -0.38
LINC00642-203ENST00000444942 KIF7Q2M1P5 1343 aa12.7□□□□□ -0.38
LINC00642-203ENST00000444942 GNPATO15228 680 aa12.69□□□□□ -0.38
LINC00642-203ENST00000444942 FBLN1P23142 703 aa12.69□□□□□ -0.38
LINC00642-203ENST00000444942 LINC00116Q8NCU8 138 aa12.69□□□□□ -0.38
LINC00642-203ENST00000444942 CARD14Q9BXL6 1004 aa12.69□□□□□ -0.38
LINC00642-203ENST00000444942 PANK3Q9H999 370 aa12.69□□□□□ -0.38
LINC00642-203ENST00000444942 TMEM88BA6NKF7 163 aa12.69□□□□□ -0.38
LINC00642-203ENST00000444942 MPRIPQ6WCQ1 1025 aa12.69□□□□□ -0.38
LINC00642-203ENST00000444942 POTEDQ86YR6 584 aa12.69□□□□□ -0.38
LINC00642-203ENST00000444942 COG3Q96JB2 828 aa12.69□□□□□ -0.38
LINC00642-203ENST00000444942 CASP8AP2Q9UKL3 1982 aa12.68□□□□□ -0.38
LINC00642-203ENST00000444942 POTEIP0CG38 1075 aa12.68□□□□□ -0.38
LINC00642-203ENST00000444942 POTEJP0CG39 1038 aa12.68□□□□□ -0.38
LINC00642-203ENST00000444942 PARP3Q9Y6F1 533 aa12.68□□□□□ -0.38
LINC00642-203ENST00000444942 RASSF10A6NK89 507 aa12.67□□□□□ -0.38
LINC00642-203ENST00000444942 FYB1O15117 783 aa12.67□□□□□ -0.38
LINC00642-203ENST00000444942 CNGB1Q14028 1251 aaPredicted RBP12.67□□□□□ -0.38
LINC00642-203ENST00000444942 DPY19L2Q6NUT2 758 aa12.67□□□□□ -0.38
LINC00642-203ENST00000444942 MCOLN1Q9GZU1 580 aa12.67□□□□□ -0.38
LINC00642-203ENST00000444942 DLEC1Q9Y238 1755 aa12.66□□□□□ -0.38
LINC00642-203ENST00000444942 IP6K1Q92551 441 aa12.66□□□□□ -0.38
LINC00642-203ENST00000444942 LTV1Q96GA3 475 aaPredicted RBP12.66□□□□□ -0.38
LINC00642-203ENST00000444942 WDR33Q9C0J8 1336 aaKnown RBP12.65□□□□□ -0.38
LINC00642-203ENST00000444942 DEFB115Q30KQ5 88 aa12.65□□□□□ -0.38
LINC00642-203ENST00000444942 SCN4AP35499 1836 aa12.65□□□□□ -0.39
LINC00642-203ENST00000444942 LTBP1Q14766 1721 aa12.65□□□□□ -0.39
LINC00642-203ENST00000444942 ANKRD26Q9UPS8 1709 aa12.65□□□□□ -0.39
LINC00642-203ENST00000444942 CGNL1Q0VF96 1302 aa12.64□□□□□ -0.39
LINC00642-203ENST00000444942 LOC102724428A0A0B4J2F2 783 aa12.64□□□□□ -0.39
LINC00642-203ENST00000444942 GYS1P13807 737 aa12.64□□□□□ -0.39
LINC00642-203ENST00000444942 CHRNA5P30532 468 aa12.64□□□□□ -0.39
LINC00642-203ENST00000444942 TNNT2P45379 298 aaPredicted RBP12.64□□□□□ -0.39
LINC00642-203ENST00000444942 SIK1P57059 783 aa12.64□□□□□ -0.39
LINC00642-203ENST00000444942 WASHC2AQ641Q2 1341 aa12.63□□□□□ -0.39
LINC00642-203ENST00000444942 ITPK1Q13572 414 aa12.63□□□□□ -0.39
LINC00642-203ENST00000444942 RRS1Q15050 365 aaKnown RBP12.63□□□□□ -0.39
LINC00642-203ENST00000444942 TRAPPC3LQ5T215 181 aa12.63□□□□□ -0.39
LINC00642-203ENST00000444942 ITGBL1O95965 494 aaPredicted RBP12.62□□□□□ -0.39
LINC00642-203ENST00000444942 BEGAINQ9BUH8 593 aa12.62□□□□□ -0.39
LINC00642-203ENST00000444942 COL5A3P25940 1745 aaPredicted RBP12.61□□□□□ -0.39
LINC00642-203ENST00000444942 AMPHP49418 695 aa12.61□□□□□ -0.39
LINC00642-203ENST00000444942 LDHDQ86WU2 507 aa12.61□□□□□ -0.39
LINC00642-203ENST00000444942 PIGBQ92521 554 aa12.61□□□□□ -0.39
LINC00642-203ENST00000444942 RTCBQ9Y3I0 505 aaKnown RBP12.61□□□□□ -0.39
LINC00642-203ENST00000444942 PCDH11XQ9BZA7 1347 aa12.61□□□□□ -0.39
LINC00642-203ENST00000444942 PCDH11YQ9BZA8 1340 aa12.61□□□□□ -0.39
LINC00642-203ENST00000444942 PPM1GO15355 546 aaPredicted RBP12.6□□□□□ -0.39
LINC00642-203ENST00000444942 ARHGEF1Q92888 912 aaKnown RBP12.6□□□□□ -0.39
LINC00642-203ENST00000444942 KNSTRNQ9Y448 316 aa12.6□□□□□ -0.39
LINC00642-203ENST00000444942 ZNF831Q5JPB2 1677 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms