RNA–Protein interactions for RNA: ENST00000444677.5

GARNL3-208, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-208ENST00000444677 ITPK1Q13572 414 aa18.1■□□□□ 0.49
GARNL3-208ENST00000444677 TFCP2L1Q9NZI6 479 aa18.1■□□□□ 0.49
GARNL3-208ENST00000444677 PNPLA7Q6ZV29 1317 aa18.09■□□□□ 0.49
GARNL3-208ENST00000444677 LINC00116Q8NCU8 138 aa18.09■□□□□ 0.49
GARNL3-208ENST00000444677 RBM42Q9BTD8 480 aaKnown RBP18.09■□□□□ 0.49
GARNL3-208ENST00000444677 FCHSD2O94868 740 aa18.08■□□□□ 0.48
GARNL3-208ENST00000444677 ATP6V1AP38606 617 aa18.08■□□□□ 0.48
GARNL3-208ENST00000444677 IL17REQ8NFR9 667 aa18.08■□□□□ 0.48
GARNL3-208ENST00000444677 SLC52A2Q9HAB3 445 aa18.08■□□□□ 0.48
GARNL3-208ENST00000444677 SPON1Q9HCB6 807 aa18.08■□□□□ 0.48
GARNL3-208ENST00000444677 MYBBP1AQ9BQG0 1328 aaKnown RBP18.07■□□□□ 0.48
GARNL3-208ENST00000444677 PTCD1O75127 700 aaKnown RBP18.07■□□□□ 0.48
GARNL3-208ENST00000444677 AMIGO3Q86WK7 504 aa18.07■□□□□ 0.48
GARNL3-208ENST00000444677 GAS2L2Q8NHY3 880 aa18.07■□□□□ 0.48
GARNL3-208ENST00000444677 PRKRIP1Q9H875 184 aaPredicted RBP18.07■□□□□ 0.48
GARNL3-208ENST00000444677 PPP1R1BQ9UD71 204 aaPredicted RBP18.07■□□□□ 0.48
GARNL3-208ENST00000444677 C5P01031 1676 aa18.06■□□□□ 0.48
GARNL3-208ENST00000444677 SLC39A6Q13433 755 aa18.06■□□□□ 0.48
GARNL3-208ENST00000444677 COL23A1Q86Y22 540 aaPredicted RBP18.06■□□□□ 0.48
GARNL3-208ENST00000444677 TAF1LQ8IZX4 1826 aa18.05■□□□□ 0.48
GARNL3-208ENST00000444677 GNAT3A8MTJ3 354 aa18.05■□□□□ 0.48
GARNL3-208ENST00000444677 MAP3K5Q99683 1374 aa18.04■□□□□ 0.48
GARNL3-208ENST00000444677 PTGER2P43116 358 aa18.04■□□□□ 0.48
GARNL3-208ENST00000444677 MSH5O43196 834 aa18.03■□□□□ 0.48
GARNL3-208ENST00000444677 PLEKHF1Q96S99 279 aa18.03■□□□□ 0.48
GARNL3-208ENST00000444677 MTFR1LQ9H019 292 aa18.03■□□□□ 0.48
GARNL3-208ENST00000444677 DCTN1Q14203 1278 aa18.02■□□□□ 0.48
GARNL3-208ENST00000444677 AK7Q96M32 723 aa18.02■□□□□ 0.48
GARNL3-208ENST00000444677 PHF14O94880 888 aa18.01■□□□□ 0.47
GARNL3-208ENST00000444677 MCM10Q7L590 875 aa18.01■□□□□ 0.47
GARNL3-208ENST00000444677 SGIP1Q9BQI5 828 aa18.01■□□□□ 0.47
GARNL3-208ENST00000444677 GNPATO15228 680 aa17.99■□□□□ 0.47
GARNL3-208ENST00000444677 TEFQ10587 303 aa17.99■□□□□ 0.47
GARNL3-208ENST00000444677 MSL1Q68DK7 614 aa17.99■□□□□ 0.47
GARNL3-208ENST00000444677 COL24A1Q17RW2 1714 aa17.98■□□□□ 0.47
GARNL3-208ENST00000444677 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.98■□□□□ 0.47
GARNL3-208ENST00000444677 KCNQ3O43525 872 aa17.98■□□□□ 0.47
GARNL3-208ENST00000444677 DNAJC10Q8IXB1 793 aa17.98■□□□□ 0.47
GARNL3-208ENST00000444677 SLC16A10Q8TF71 515 aa17.98■□□□□ 0.47
GARNL3-208ENST00000444677 MRC1P22897 1456 aa17.98■□□□□ 0.47
GARNL3-208ENST00000444677 CEMIPQ8WUJ3 1361 aa17.97■□□□□ 0.47
GARNL3-208ENST00000444677 CCDC184Q52MB2 194 aa17.97■□□□□ 0.47
GARNL3-208ENST00000444677 VIRMAQ69YN4 1812 aaKnown RBP17.96■□□□□ 0.47
GARNL3-208ENST00000444677 CCDC146Q8IYE0 955 aa17.96■□□□□ 0.47
GARNL3-208ENST00000444677 RTF1Q92541 710 aaKnown RBP17.96■□□□□ 0.47
GARNL3-208ENST00000444677 C4BP0C0L5 1744 aa17.95■□□□□ 0.46
GARNL3-208ENST00000444677 CRKLP46109 303 aaKnown RBP17.95■□□□□ 0.46
GARNL3-208ENST00000444677 NFE2L2Q16236 605 aa17.95■□□□□ 0.46
GARNL3-208ENST00000444677 RC3H1Q5TC82 1133 aaKnown RBP17.95■□□□□ 0.46
GARNL3-208ENST00000444677 FLAD1Q8NFF5 587 aa17.95■□□□□ 0.46
GARNL3-208ENST00000444677 ADAMTS8Q9UP79 889 aa17.95■□□□□ 0.46
GARNL3-208ENST00000444677 NEFMP07197 916 aa17.94■□□□□ 0.46
GARNL3-208ENST00000444677 HMGB2P26583 209 aaKnown RBP17.94■□□□□ 0.46
GARNL3-208ENST00000444677 SSFA2P28290 1259 aa17.94■□□□□ 0.46
GARNL3-208ENST00000444677 ZNF790Q6PG37 636 aa17.94■□□□□ 0.46
GARNL3-208ENST00000444677 ZNF496Q96IT1 587 aaPredicted RBP17.94■□□□□ 0.46
GARNL3-208ENST00000444677 ARXQ96QS3 562 aa17.94■□□□□ 0.46
GARNL3-208ENST00000444677 THUMPD2Q9BTF0 503 aaKnown RBP17.94■□□□□ 0.46
GARNL3-208ENST00000444677 CNTNAP4Q9C0A0 1308 aa17.94■□□□□ 0.46
GARNL3-208ENST00000444677 ADAMTS7Q9UKP4 1686 aa17.93■□□□□ 0.46
GARNL3-208ENST00000444677 UBR3Q6ZT12 1888 aa17.93■□□□□ 0.46
GARNL3-208ENST00000444677 BTBD11A6QL63 1104 aa17.93■□□□□ 0.46
GARNL3-208ENST00000444677 HTATSF1O43719 755 aaKnown RBP17.93■□□□□ 0.46
GARNL3-208ENST00000444677 RPS6KA4O75676 772 aa17.93■□□□□ 0.46
GARNL3-208ENST00000444677 INTS5Q6P9B9 1019 aaKnown RBP17.93■□□□□ 0.46
GARNL3-208ENST00000444677 TTC5Q8N0Z6 440 aa17.93■□□□□ 0.46
GARNL3-208ENST00000444677 MIS18AQ9NYP9 233 aa17.93■□□□□ 0.46
GARNL3-208ENST00000444677 RTCBQ9Y3I0 505 aaKnown RBP17.93■□□□□ 0.46
GARNL3-208ENST00000444677 MAPK8IP3Q9UPT6 1336 aa17.93■□□□□ 0.46
GARNL3-208ENST00000444677 CYP19A1P11511 503 aaPredicted RBP17.92■□□□□ 0.46
GARNL3-208ENST00000444677 WDR43Q15061 677 aaKnown RBP eCLIP17.92■□□□□ 0.46
GARNL3-208ENST00000444677 ARHGEF1Q92888 912 aaKnown RBP17.92■□□□□ 0.46
GARNL3-208ENST00000444677 PNNQ9H307 717 aaKnown RBP17.92■□□□□ 0.46
GARNL3-208ENST00000444677 RRP7AQ9Y3A4 280 aaKnown RBP17.92■□□□□ 0.46
GARNL3-208ENST00000444677 KCPQ6ZWJ8 1503 aa17.92■□□□□ 0.46
GARNL3-208ENST00000444677 SCN11AQ9UI33 1791 aa17.91■□□□□ 0.46
GARNL3-208ENST00000444677 TRAPPC3LQ5T215 181 aa17.91■□□□□ 0.46
GARNL3-208ENST00000444677 FHDC1Q9C0D6 1143 aaPredicted RBP17.91■□□□□ 0.46
GARNL3-208ENST00000444677 POLD1P28340 1107 aa17.9■□□□□ 0.46
GARNL3-208ENST00000444677 RIPK4P57078 832 aa17.9■□□□□ 0.46
GARNL3-208ENST00000444677 PRAMEF22A3QJZ6 481 aa17.89■□□□□ 0.45
GARNL3-208ENST00000444677 TMPOP42166 694 aaKnown RBP17.89■□□□□ 0.45
GARNL3-208ENST00000444677 TAF7Q15545 349 aaPredicted RBP17.89■□□□□ 0.45
GARNL3-208ENST00000444677 VSIG10Q8N0Z9 540 aa17.89■□□□□ 0.45
GARNL3-208ENST00000444677 SYT17Q9BSW7 474 aa17.89■□□□□ 0.45
GARNL3-208ENST00000444677 CCDC87Q9NVE4 849 aa17.89■□□□□ 0.45
GARNL3-208ENST00000444677 SRP68Q9UHB9 627 aaKnown RBP17.89■□□□□ 0.45
GARNL3-208ENST00000444677 ZBTB1Q9Y2K1 713 aa17.89■□□□□ 0.45
GARNL3-208ENST00000444677 NEUROD2Q15784 382 aa17.88■□□□□ 0.45
GARNL3-208ENST00000444677 KLHL34Q8N239 644 aa17.88■□□□□ 0.45
GARNL3-208ENST00000444677 RUNDC1Q96C34 613 aa17.88■□□□□ 0.45
GARNL3-208ENST00000444677 FMNL2Q96PY5 1086 aa17.88■□□□□ 0.45
GARNL3-208ENST00000444677 HEG1Q9ULI3 1381 aa17.88■□□□□ 0.45
GARNL3-208ENST00000444677 ANP32CO43423 234 aa17.87■□□□□ 0.45
GARNL3-208ENST00000444677 COL5A3P25940 1745 aaPredicted RBP17.86■□□□□ 0.45
GARNL3-208ENST00000444677 DCAF8L1A6NGE4 600 aa17.86■□□□□ 0.45
GARNL3-208ENST00000444677 CANXP27824 592 aaKnown RBP17.86■□□□□ 0.45
GARNL3-208ENST00000444677 USP16Q9Y5T5 823 aa17.86■□□□□ 0.45
GARNL3-208ENST00000444677 A1BGP04217 495 aa17.85■□□□□ 0.45
GARNL3-208ENST00000444677 GYS1P13807 737 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 188.8 ms