RNA–Protein interactions for RNA: ENST00000444621.1

HLA-F-221, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 495 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-221ENST00000444621 ZEB1P37275 1124 aaPredicted RBP14.93□□□□□ -0.02
HLA-F-221ENST00000444621 MPRIPQ6WCQ1 1025 aa14.93□□□□□ -0.02
HLA-F-221ENST00000444621 DNAJC5GQ8N7S2 189 aa14.93□□□□□ -0.02
HLA-F-221ENST00000444621 NCAPD2Q15021 1401 aa14.92□□□□□ -0.02
HLA-F-221ENST00000444621 TOGARAM1Q9Y4F4 1720 aa14.92□□□□□ -0.02
HLA-F-221ENST00000444621 SULT6B1Q6IMI4 303 aa14.92□□□□□ -0.02
HLA-F-221ENST00000444621 SMARCC1Q92922 1105 aaPredicted RBP14.92□□□□□ -0.02
HLA-F-221ENST00000444621 UBR3Q6ZT12 1888 aa14.92□□□□□ -0.02
HLA-F-221ENST00000444621 C4BP0C0L5 1744 aa14.92□□□□□ -0.02
HLA-F-221ENST00000444621 CYP27B1O15528 508 aa14.91□□□□□ -0.02
HLA-F-221ENST00000444621 NKX1-1Q15270 411 aaPredicted RBP14.91□□□□□ -0.02
HLA-F-221ENST00000444621 C1orf141Q5JVX7 400 aa14.91□□□□□ -0.02
HLA-F-221ENST00000444621 PKD1L3Q7Z443 1732 aa14.91□□□□□ -0.02
HLA-F-221ENST00000444621 IL13P35225 146 aa14.9□□□□□ -0.02
HLA-F-221ENST00000444621 AMIGO3Q86WK7 504 aa14.9□□□□□ -0.02
HLA-F-221ENST00000444621 TMOD3Q9NYL9 352 aa14.9□□□□□ -0.02
HLA-F-221ENST00000444621 ITGB4P16144 1822 aa14.89□□□□□ -0.03
HLA-F-221ENST00000444621 PALLDQ8WX93 1383 aa14.89□□□□□ -0.03
HLA-F-221ENST00000444621 CICQ96RK0 1608 aaPredicted RBP14.89□□□□□ -0.03
HLA-F-221ENST00000444621 PHKG2P15735 406 aa14.89□□□□□ -0.03
HLA-F-221ENST00000444621 ZNF530Q6P9A1 599 aaPredicted RBP14.89□□□□□ -0.03
HLA-F-221ENST00000444621 SMIM5Q71RC9 77 aa14.89□□□□□ -0.03
HLA-F-221ENST00000444621 AK7Q96M32 723 aa14.89□□□□□ -0.03
HLA-F-221ENST00000444621 NUDCQ9Y266 331 aa14.89□□□□□ -0.03
HLA-F-221ENST00000444621 WDR90Q96KV7 1748 aa14.89□□□□□ -0.03
HLA-F-221ENST00000444621 TOMM70O94826 608 aa14.88□□□□□ -0.03
HLA-F-221ENST00000444621 PHF14O94880 888 aa14.88□□□□□ -0.03
HLA-F-221ENST00000444621 DCAF5Q96JK2 942 aa14.88□□□□□ -0.03
HLA-F-221ENST00000444621 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.87□□□□□ -0.03
HLA-F-221ENST00000444621 ERVV-2B6SEH9 535 aa14.87□□□□□ -0.03
HLA-F-221ENST00000444621 U2SURPO15042 1029 aaKnown RBP14.87□□□□□ -0.03
HLA-F-221ENST00000444621 N4BP2Q86UW6 1770 aaPredicted RBP14.86□□□□□ -0.03
HLA-F-221ENST00000444621 CABP4P57796 275 aa14.86□□□□□ -0.03
HLA-F-221ENST00000444621 CAPN15O75808 1086 aa14.85□□□□□ -0.03
HLA-F-221ENST00000444621 COL13A1Q5TAT6 717 aaPredicted RBP14.85□□□□□ -0.03
HLA-F-221ENST00000444621 AEBP1Q8IUX7 1158 aa14.85□□□□□ -0.03
HLA-F-221ENST00000444621 KIAA1551Q9HCM1 1747 aa14.85□□□□□ -0.03
HLA-F-221ENST00000444621 KIF13BQ9NQT8 1826 aa14.85□□□□□ -0.03
HLA-F-221ENST00000444621 HMOX1P09601 288 aa14.84□□□□□ -0.03
HLA-F-221ENST00000444621 PIGBQ92521 554 aa14.84□□□□□ -0.03
HLA-F-221ENST00000444621 NMRK2Q9NPI5 230 aa14.84□□□□□ -0.03
HLA-F-221ENST00000444621 KDRP35968 1356 aa14.84□□□□□ -0.03
HLA-F-221ENST00000444621 HTRA3P83110 453 aa14.83□□□□□ -0.04
HLA-F-221ENST00000444621 AKAP4Q5JQC9 854 aa14.83□□□□□ -0.04
HLA-F-221ENST00000444621 NEFMP07197 916 aa14.82□□□□□ -0.04
HLA-F-221ENST00000444621 SSFA2P28290 1259 aa14.82□□□□□ -0.04
HLA-F-221ENST00000444621 PPP2R1AP30153 589 aa14.82□□□□□ -0.04
HLA-F-221ENST00000444621 PXDNLA1KZ92 1463 aa14.82□□□□□ -0.04
HLA-F-221ENST00000444621 ARHGAP27Q6ZUM4 889 aa14.81□□□□□ -0.04
HLA-F-221ENST00000444621 KLRG1Q96E93 195 aa14.81□□□□□ -0.04
HLA-F-221ENST00000444621 BCS1LQ9Y276 419 aa14.81□□□□□ -0.04
HLA-F-221ENST00000444621 ATP6V1AP38606 617 aa14.8□□□□□ -0.04
HLA-F-221ENST00000444621 LINC00116Q8NCU8 138 aa14.8□□□□□ -0.04
HLA-F-221ENST00000444621 LOC102724428A0A0B4J2F2 783 aa14.79□□□□□ -0.04
HLA-F-221ENST00000444621 A0A0G2JLW4 131 aa14.79□□□□□ -0.04
HLA-F-221ENST00000444621 MMP10P09238 476 aa14.79□□□□□ -0.04
HLA-F-221ENST00000444621 BRCA1P38398 1863 aaKnown RBP14.79□□□□□ -0.04
HLA-F-221ENST00000444621 SIK1P57059 783 aa14.79□□□□□ -0.04
HLA-F-221ENST00000444621 DDX10Q13206 875 aaKnown RBP14.79□□□□□ -0.04
HLA-F-221ENST00000444621 JMYQ8N9B5 988 aa14.79□□□□□ -0.04
HLA-F-221ENST00000444621 GAS2L2Q8NHY3 880 aa14.79□□□□□ -0.04
HLA-F-221ENST00000444621 RBM46Q8TBY0 533 aaKnown RBP14.79□□□□□ -0.04
HLA-F-221ENST00000444621 RBM42Q9BTD8 480 aaKnown RBP14.79□□□□□ -0.04
HLA-F-221ENST00000444621 GNPATO15228 680 aa14.78□□□□□ -0.04
HLA-F-221ENST00000444621 U2AF1L5P0DN76 240 aaPredicted RBP14.78□□□□□ -0.04
HLA-F-221ENST00000444621 TGFB2P61812 414 aa14.78□□□□□ -0.04
HLA-F-221ENST00000444621 U2AF1Q01081 240 aaKnown RBP eCLIP14.78□□□□□ -0.04
HLA-F-221ENST00000444621 RALBP1Q15311 655 aa14.78□□□□□ -0.04
HLA-F-221ENST00000444621 C16orf71Q8IYS4 520 aaPredicted RBP14.78□□□□□ -0.04
HLA-F-221ENST00000444621 TNS4Q8IZW8 715 aa14.78□□□□□ -0.04
HLA-F-221ENST00000444621 NFATC2IPQ8NCF5 419 aa14.78□□□□□ -0.04
HLA-F-221ENST00000444621 PNNQ9H307 717 aaKnown RBP14.78□□□□□ -0.04
HLA-F-221ENST00000444621 ASAP1Q9ULH1 1129 aa14.78□□□□□ -0.04
HLA-F-221ENST00000444621 ATG3Q9NT62 314 aa14.77□□□□□ -0.05
HLA-F-221ENST00000444621 PCNTO95613 3336 aa14.77□□□□□ -0.05
HLA-F-221ENST00000444621 ARFGEF1Q9Y6D6 1849 aa14.76□□□□□ -0.05
HLA-F-221ENST00000444621 FCHSD2O94868 740 aa14.76□□□□□ -0.05
HLA-F-221ENST00000444621 PRELPP51888 382 aa14.76□□□□□ -0.05
HLA-F-221ENST00000444621 FSTL1Q12841 308 aa14.76□□□□□ -0.05
HLA-F-221ENST00000444621 ITPK1Q13572 414 aa14.76□□□□□ -0.05
HLA-F-221ENST00000444621 MTHFSDQ2M296 383 aaKnown RBP14.76□□□□□ -0.05
HLA-F-221ENST00000444621 GNAT3A8MTJ3 354 aa14.75□□□□□ -0.05
HLA-F-221ENST00000444621 DPEP1P16444 411 aa14.75□□□□□ -0.05
HLA-F-221ENST00000444621 C9orf131Q5VYM1 1079 aa14.75□□□□□ -0.05
HLA-F-221ENST00000444621 C10orf71Q711Q0 1435 aa14.75□□□□□ -0.05
HLA-F-221ENST00000444621 RNMTO43148 476 aaKnown RBP14.74□□□□□ -0.05
HLA-F-221ENST00000444621 PRKAR2BP31323 418 aa14.74□□□□□ -0.05
HLA-F-221ENST00000444621 TEFQ10587 303 aa14.74□□□□□ -0.05
HLA-F-221ENST00000444621 RTF1Q92541 710 aaKnown RBP14.74□□□□□ -0.05
HLA-F-221ENST00000444621 SLC52A2Q9HAB3 445 aa14.74□□□□□ -0.05
HLA-F-221ENST00000444621 KCPQ6ZWJ8 1503 aa14.74□□□□□ -0.05
HLA-F-221ENST00000444621 SCN11AQ9UI33 1791 aa14.74□□□□□ -0.05
HLA-F-221ENST00000444621 C4AP0C0L4 1744 aa14.74□□□□□ -0.05
HLA-F-221ENST00000444621 COL3A1P02461 1466 aaPredicted RBP14.74□□□□□ -0.05
HLA-F-221ENST00000444621 KDM6AO15550 1401 aaPredicted RBP14.74□□□□□ -0.05
HLA-F-221ENST00000444621 TTC5Q8N0Z6 440 aa14.73□□□□□ -0.05
HLA-F-221ENST00000444621 PTCD1O75127 700 aaKnown RBP14.72□□□□□ -0.05
HLA-F-221ENST00000444621 NLGN1Q8N2Q7 840 aa14.72□□□□□ -0.05
HLA-F-221ENST00000444621 LGR6Q9HBX8 967 aa14.72□□□□□ -0.05
HLA-F-221ENST00000444621 CCDC87Q9NVE4 849 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms