RNA–Protein interactions for RNA: ENST00000444481.3

VCX3B-203, Transcript of variable charge X-linked 3B, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3B, Length 812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3B-203ENST00000444481 MAP3K5Q99683 1374 aa24.55■■□□□ 1.52
VCX3B-203ENST00000444481 MSH5O43196 834 aa24.55■■□□□ 1.52
VCX3B-203ENST00000444481 HMOX1P09601 288 aa24.55■■□□□ 1.52
VCX3B-203ENST00000444481 ATP6V1AP38606 617 aa24.55■■□□□ 1.52
VCX3B-203ENST00000444481 COL3A1P02461 1466 aaPredicted RBP24.54■■□□□ 1.52
VCX3B-203ENST00000444481 LINC00116Q8NCU8 138 aa24.52■■□□□ 1.52
VCX3B-203ENST00000444481 CFAP53Q96M91 514 aa24.52■■□□□ 1.52
VCX3B-203ENST00000444481 ZNF831Q5JPB2 1677 aa24.52■■□□□ 1.52
VCX3B-203ENST00000444481 SSFA2P28290 1259 aa24.51■■□□□ 1.51
VCX3B-203ENST00000444481 ITPK1Q13572 414 aa24.51■■□□□ 1.51
VCX3B-203ENST00000444481 NFATC2IPQ8NCF5 419 aa24.5■■□□□ 1.51
VCX3B-203ENST00000444481 SCN11AQ9UI33 1791 aa24.49■■□□□ 1.51
VCX3B-203ENST00000444481 UBR3Q6ZT12 1888 aa24.49■■□□□ 1.51
VCX3B-203ENST00000444481 U2SURPO15042 1029 aaKnown RBP24.49■■□□□ 1.51
VCX3B-203ENST00000444481 RBM42Q9BTD8 480 aaKnown RBP24.49■■□□□ 1.51
VCX3B-203ENST00000444481 MTHFSDQ2M296 383 aaKnown RBP24.48■■□□□ 1.51
VCX3B-203ENST00000444481 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.47■■□□□ 1.51
VCX3B-203ENST00000444481 PPP2R1AP30153 589 aa24.46■■□□□ 1.51
VCX3B-203ENST00000444481 RC3H1Q5TC82 1133 aaKnown RBP24.46■■□□□ 1.51
VCX3B-203ENST00000444481 SLC4A9Q96Q91 983 aa24.46■■□□□ 1.51
VCX3B-203ENST00000444481 SLC52A2Q9HAB3 445 aa24.46■■□□□ 1.51
VCX3B-203ENST00000444481 GNPATO15228 680 aa24.45■■□□□ 1.5
VCX3B-203ENST00000444481 RNMTO43148 476 aaKnown RBP24.45■■□□□ 1.5
VCX3B-203ENST00000444481 PHF14O94880 888 aa24.45■■□□□ 1.5
VCX3B-203ENST00000444481 AMIGO3Q86WK7 504 aa24.45■■□□□ 1.5
VCX3B-203ENST00000444481 NUDCQ9Y266 331 aa24.45■■□□□ 1.5
VCX3B-203ENST00000444481 LGR6Q9HBX8 967 aa24.44■■□□□ 1.5
VCX3B-203ENST00000444481 MSL1Q68DK7 614 aa24.43■■□□□ 1.5
VCX3B-203ENST00000444481 CNTNAP4Q9C0A0 1308 aa24.42■■□□□ 1.5
VCX3B-203ENST00000444481 PTCD1O75127 700 aaKnown RBP24.42■■□□□ 1.5
VCX3B-203ENST00000444481 GAS2L2Q8NHY3 880 aa24.42■■□□□ 1.5
VCX3B-203ENST00000444481 RTCBQ9Y3I0 505 aaKnown RBP24.42■■□□□ 1.5
VCX3B-203ENST00000444481 MRC1P22897 1456 aa24.42■■□□□ 1.5
VCX3B-203ENST00000444481 ADAMTS7Q9UKP4 1686 aa24.42■■□□□ 1.5
VCX3B-203ENST00000444481 KLHL34Q8N239 644 aa24.41■■□□□ 1.5
VCX3B-203ENST00000444481 COL5A3P25940 1745 aaPredicted RBP24.41■■□□□ 1.5
VCX3B-203ENST00000444481 ADRA2BP18089 450 aa24.4■■□□□ 1.5
VCX3B-203ENST00000444481 TRAPPC3LQ5T215 181 aa24.4■■□□□ 1.5
VCX3B-203ENST00000444481 VIRMAQ69YN4 1812 aaKnown RBP24.38■■□□□ 1.49
VCX3B-203ENST00000444481 GNAT3A8MTJ3 354 aa24.38■■□□□ 1.49
VCX3B-203ENST00000444481 RPS6KA4O75676 772 aa24.38■■□□□ 1.49
VCX3B-203ENST00000444481 SMIM5Q71RC9 77 aa24.38■■□□□ 1.49
VCX3B-203ENST00000444481 CICQ96RK0 1608 aaPredicted RBP24.38■■□□□ 1.49
VCX3B-203ENST00000444481 YY1P25490 414 aa24.37■■□□□ 1.49
VCX3B-203ENST00000444481 RSPH6AQ9H0K4 717 aa24.37■■□□□ 1.49
VCX3B-203ENST00000444481 CD2APQ9Y5K6 639 aa24.37■■□□□ 1.49
VCX3B-203ENST00000444481 PRKAR2BP31323 418 aa24.36■■□□□ 1.49
VCX3B-203ENST00000444481 FCHSD2O94868 740 aa24.35■■□□□ 1.49
VCX3B-203ENST00000444481 U2AF1L5P0DN76 240 aaPredicted RBP24.35■■□□□ 1.49
VCX3B-203ENST00000444481 U2AF1Q01081 240 aaKnown RBP eCLIP24.35■■□□□ 1.49
VCX3B-203ENST00000444481 NLGN2Q8NFZ4 835 aa24.34■■□□□ 1.49
VCX3B-203ENST00000444481 ARHGEF1Q92888 912 aaKnown RBP24.34■■□□□ 1.49
VCX3B-203ENST00000444481 MYH14Q7Z406 1995 aaKnown RBP24.33■■□□□ 1.49
VCX3B-203ENST00000444481 CRKLP46109 303 aaKnown RBP24.33■■□□□ 1.49
VCX3B-203ENST00000444481 GPR162Q16538 588 aa24.33■■□□□ 1.49
VCX3B-203ENST00000444481 NLGN1Q8N2Q7 840 aa24.33■■□□□ 1.49
VCX3B-203ENST00000444481 TJP1Q07157 1748 aa24.32■■□□□ 1.48
VCX3B-203ENST00000444481 RFC4P35249 363 aa24.32■■□□□ 1.48
VCX3B-203ENST00000444481 TEFQ10587 303 aa24.32■■□□□ 1.48
VCX3B-203ENST00000444481 SLC39A6Q13433 755 aa24.32■■□□□ 1.48
VCX3B-203ENST00000444481 VSIG10Q8N0Z9 540 aa24.32■■□□□ 1.48
VCX3B-203ENST00000444481 IL17REQ8NFR9 667 aa24.32■■□□□ 1.48
VCX3B-203ENST00000444481 PHACTR3Q96KR7 559 aa24.32■■□□□ 1.48
VCX3B-203ENST00000444481 UTRNP46939 3433 aa24.29■■□□□ 1.48
VCX3B-203ENST00000444481 DNAJC10Q8IXB1 793 aa24.29■■□□□ 1.48
VCX3B-203ENST00000444481 TTC5Q8N0Z6 440 aa24.29■■□□□ 1.48
VCX3B-203ENST00000444481 KCPQ6ZWJ8 1503 aa24.29■■□□□ 1.48
VCX3B-203ENST00000444481 CEMIPQ8WUJ3 1361 aa24.29■■□□□ 1.48
VCX3B-203ENST00000444481 INTS5Q6P9B9 1019 aaKnown RBP24.28■■□□□ 1.48
VCX3B-203ENST00000444481 CCDC87Q9NVE4 849 aa24.28■■□□□ 1.48
VCX3B-203ENST00000444481 MMP10P09238 476 aa24.27■■□□□ 1.48
VCX3B-203ENST00000444481 CYP19A1P11511 503 aaPredicted RBP24.27■■□□□ 1.48
VCX3B-203ENST00000444481 GYS1P13807 737 aa24.27■■□□□ 1.48
VCX3B-203ENST00000444481 RALBP1Q15311 655 aa24.27■■□□□ 1.48
VCX3B-203ENST00000444481 UBR2Q8IWV8 1755 aa24.26■■□□□ 1.47
VCX3B-203ENST00000444481 ZNF790Q6PG37 636 aa24.26■■□□□ 1.47
VCX3B-203ENST00000444481 PELP1Q8IZL8 1130 aaKnown RBP24.26■■□□□ 1.47
VCX3B-203ENST00000444481 CHD4Q14839 1912 aa24.25■■□□□ 1.47
VCX3B-203ENST00000444481 HTATSF1O43719 755 aaKnown RBP24.25■■□□□ 1.47
VCX3B-203ENST00000444481 GRIN3BO60391 1043 aa24.25■■□□□ 1.47
VCX3B-203ENST00000444481 RTF1Q92541 710 aaKnown RBP24.25■■□□□ 1.47
VCX3B-203ENST00000444481 C4AP0C0L4 1744 aa24.24■■□□□ 1.47
VCX3B-203ENST00000444481 SIPA1L3O60292 1781 aaPredicted RBP24.24■■□□□ 1.47
VCX3B-203ENST00000444481 NEFMP07197 916 aa24.24■■□□□ 1.47
VCX3B-203ENST00000444481 TEX13AQ9BXU3 409 aaPredicted RBP24.24■■□□□ 1.47
VCX3B-203ENST00000444481 DDX10Q13206 875 aaKnown RBP24.23■■□□□ 1.47
VCX3B-203ENST00000444481 USP42Q9H9J4 1324 aaKnown RBP24.23■■□□□ 1.47
VCX3B-203ENST00000444481 SOS1Q07889 1333 aaPredicted RBP24.22■■□□□ 1.47
VCX3B-203ENST00000444481 STARD3NLO95772 234 aa24.22■■□□□ 1.47
VCX3B-203ENST00000444481 PNNQ9H307 717 aaKnown RBP24.22■■□□□ 1.47
VCX3B-203ENST00000444481 GOLGB1Q14789 3259 aaKnown RBP24.21■■□□□ 1.47
VCX3B-203ENST00000444481 HEG1Q9ULI3 1381 aa24.21■■□□□ 1.47
VCX3B-203ENST00000444481 ZNF496Q96IT1 587 aaPredicted RBP24.21■■□□□ 1.47
VCX3B-203ENST00000444481 PARP3Q9Y6F1 533 aa24.21■■□□□ 1.47
VCX3B-203ENST00000444481 BTBD11A6QL63 1104 aa24.2■■□□□ 1.46
VCX3B-203ENST00000444481 FMNL2Q96PY5 1086 aa24.2■■□□□ 1.46
VCX3B-203ENST00000444481 ZPR1O75312 459 aa24.19■■□□□ 1.46
VCX3B-203ENST00000444481 YBX3P16989 372 aaKnown RBP eCLIP24.19■■□□□ 1.46
VCX3B-203ENST00000444481 ZBTB1Q9Y2K1 713 aa24.19■■□□□ 1.46
VCX3B-203ENST00000444481 SRP68Q9UHB9 627 aaKnown RBP24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms