RNA–Protein interactions for RNA: ENST00000444408.1

AP1S3-207, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 4

Gene AP1S3, Length 561 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-207ENST00000444408 NFE2L2Q16236 605 aa22.73■■□□□ 1.23
AP1S3-207ENST00000444408 MCM10Q7L590 875 aa22.73■■□□□ 1.23
AP1S3-207ENST00000444408 SLC52A2Q9HAB3 445 aa22.73■■□□□ 1.23
AP1S3-207ENST00000444408 RRP7AQ9Y3A4 280 aaKnown RBP22.73■■□□□ 1.23
AP1S3-207ENST00000444408 ANO8Q9HCE9 1232 aaPredicted RBP22.72■■□□□ 1.23
AP1S3-207ENST00000444408 NEFMP07197 916 aa22.71■■□□□ 1.23
AP1S3-207ENST00000444408 PNNQ9H307 717 aaKnown RBP22.71■■□□□ 1.23
AP1S3-207ENST00000444408 MRC1P22897 1456 aa22.71■■□□□ 1.23
AP1S3-207ENST00000444408 SENP3-EIF4A1A0A087X0R7 540 aa22.7■■□□□ 1.22
AP1S3-207ENST00000444408 RUNDC1Q96C34 613 aa22.7■■□□□ 1.22
AP1S3-207ENST00000444408 THUMPD2Q9BTF0 503 aaKnown RBP22.7■■□□□ 1.22
AP1S3-207ENST00000444408 LY75O60449 1722 aa22.69■■□□□ 1.22
AP1S3-207ENST00000444408 CEMIPQ8WUJ3 1361 aa22.69■■□□□ 1.22
AP1S3-207ENST00000444408 SLC39A6Q13433 755 aa22.69■■□□□ 1.22
AP1S3-207ENST00000444408 VIRMAQ69YN4 1812 aaKnown RBP22.68■■□□□ 1.22
AP1S3-207ENST00000444408 TMPOP42166 694 aaKnown RBP22.68■■□□□ 1.22
AP1S3-207ENST00000444408 NEUROD2Q15784 382 aa22.68■■□□□ 1.22
AP1S3-207ENST00000444408 SMARCC1Q92922 1105 aaPredicted RBP22.68■■□□□ 1.22
AP1S3-207ENST00000444408 CCNL1Q9UK58 526 aaPredicted RBP22.68■■□□□ 1.22
AP1S3-207ENST00000444408 RTF1Q92541 710 aaKnown RBP22.67■■□□□ 1.22
AP1S3-207ENST00000444408 SLC4A9Q96Q91 983 aa22.67■■□□□ 1.22
AP1S3-207ENST00000444408 DLG5Q8TDM6 1919 aa22.67■■□□□ 1.22
AP1S3-207ENST00000444408 RIPK4P57078 832 aa22.66■■□□□ 1.22
AP1S3-207ENST00000444408 TEFQ10587 303 aa22.66■■□□□ 1.22
AP1S3-207ENST00000444408 SPON1Q9HCB6 807 aa22.66■■□□□ 1.22
AP1S3-207ENST00000444408 LOC102724428A0A0B4J2F2 783 aa22.65■■□□□ 1.22
AP1S3-207ENST00000444408 APAF1O14727 1248 aa22.65■■□□□ 1.22
AP1S3-207ENST00000444408 PTCD1O75127 700 aaKnown RBP22.65■■□□□ 1.22
AP1S3-207ENST00000444408 SIK1P57059 783 aa22.65■■□□□ 1.22
AP1S3-207ENST00000444408 SLC27A3Q5K4L6 730 aa22.65■■□□□ 1.22
AP1S3-207ENST00000444408 MIER1Q8N108 512 aa22.65■■□□□ 1.22
AP1S3-207ENST00000444408 RBM42Q9BTD8 480 aaKnown RBP22.65■■□□□ 1.22
AP1S3-207ENST00000444408 HTATSF1O43719 755 aaKnown RBP22.64■■□□□ 1.21
AP1S3-207ENST00000444408 ITPK1Q13572 414 aa22.64■■□□□ 1.21
AP1S3-207ENST00000444408 ZNF827Q17R98 1081 aa22.64■■□□□ 1.21
AP1S3-207ENST00000444408 FAM9BQ8IZU0 186 aa22.64■■□□□ 1.21
AP1S3-207ENST00000444408 PAPPAQ13219 1627 aa22.64■■□□□ 1.21
AP1S3-207ENST00000444408 KCNQ3O43525 872 aa22.63■■□□□ 1.21
AP1S3-207ENST00000444408 YY1P25490 414 aa22.63■■□□□ 1.21
AP1S3-207ENST00000444408 PPP1R1BQ9UD71 204 aaPredicted RBP22.63■■□□□ 1.21
AP1S3-207ENST00000444408 SIPA1L3O60292 1781 aaPredicted RBP22.62■■□□□ 1.21
AP1S3-207ENST00000444408 MIS18AQ9NYP9 233 aa22.61■■□□□ 1.21
AP1S3-207ENST00000444408 TRIM35Q9UPQ4 493 aa22.61■■□□□ 1.21
AP1S3-207ENST00000444408 DCAF8L1A6NGE4 600 aa22.6■■□□□ 1.21
AP1S3-207ENST00000444408 ATP6V1AP38606 617 aa22.6■■□□□ 1.21
AP1S3-207ENST00000444408 LINC00116Q8NCU8 138 aa22.6■■□□□ 1.21
AP1S3-207ENST00000444408 AKT1S1Q96B36 256 aa22.6■■□□□ 1.21
AP1S3-207ENST00000444408 KCPQ6ZWJ8 1503 aa22.59■■□□□ 1.21
AP1S3-207ENST00000444408 SLC15A2Q16348 729 aa22.59■■□□□ 1.21
AP1S3-207ENST00000444408 PDGFDQ9GZP0 370 aaPredicted RBP22.59■■□□□ 1.21
AP1S3-207ENST00000444408 STK32BQ9NY57 414 aa22.59■■□□□ 1.21
AP1S3-207ENST00000444408 BTBD11A6QL63 1104 aa22.58■■□□□ 1.21
AP1S3-207ENST00000444408 SMIM5Q71RC9 77 aa22.58■■□□□ 1.21
AP1S3-207ENST00000444408 ZNF790Q6PG37 636 aa22.57■■□□□ 1.2
AP1S3-207ENST00000444408 C5P01031 1676 aa22.56■■□□□ 1.2
AP1S3-207ENST00000444408 CCER2I3L3R5 266 aa22.56■■□□□ 1.2
AP1S3-207ENST00000444408 TAF7Q15545 349 aaPredicted RBP22.56■■□□□ 1.2
AP1S3-207ENST00000444408 AMIGO3Q86WK7 504 aa22.56■■□□□ 1.2
AP1S3-207ENST00000444408 ZNF496Q96IT1 587 aaPredicted RBP22.56■■□□□ 1.2
AP1S3-207ENST00000444408 TAF1LQ8IZX4 1826 aa22.54■■□□□ 1.2
AP1S3-207ENST00000444408 DNAJC10Q8IXB1 793 aa22.54■■□□□ 1.2
AP1S3-207ENST00000444408 TTC5Q8N0Z6 440 aa22.54■■□□□ 1.2
AP1S3-207ENST00000444408 LMOD3Q0VAK6 560 aa22.53■■□□□ 1.2
AP1S3-207ENST00000444408 C4BP0C0L5 1744 aa22.53■■□□□ 1.2
AP1S3-207ENST00000444408 TJP1Q07157 1748 aa22.53■■□□□ 1.2
AP1S3-207ENST00000444408 UBR2Q8IWV8 1755 aa22.53■■□□□ 1.2
AP1S3-207ENST00000444408 TFCP2L1Q9NZI6 479 aa22.52■■□□□ 1.2
AP1S3-207ENST00000444408 SALL2Q9Y467 1007 aaPredicted RBP22.52■■□□□ 1.2
AP1S3-207ENST00000444408 PNPLA7Q6ZV29 1317 aa22.51■■□□□ 1.19
AP1S3-207ENST00000444408 TUBGCP6Q96RT7 1819 aa22.5■■□□□ 1.19
AP1S3-207ENST00000444408 ZNF831Q5JPB2 1677 aa22.5■■□□□ 1.19
AP1S3-207ENST00000444408 PRAMEF22A3QJZ6 481 aa22.5■■□□□ 1.19
AP1S3-207ENST00000444408 HEG1Q9ULI3 1381 aa22.5■■□□□ 1.19
AP1S3-207ENST00000444408 CASZ1Q86V15 1759 aa22.49■■□□□ 1.19
AP1S3-207ENST00000444408 AK7Q96M32 723 aa22.49■■□□□ 1.19
AP1S3-207ENST00000444408 FMNL2Q96PY5 1086 aa22.49■■□□□ 1.19
AP1S3-207ENST00000444408 COL5A3P25940 1745 aaPredicted RBP22.48■■□□□ 1.19
AP1S3-207ENST00000444408 GNPATO15228 680 aa22.48■■□□□ 1.19
AP1S3-207ENST00000444408 CRKLP46109 303 aaKnown RBP22.48■■□□□ 1.19
AP1S3-207ENST00000444408 LAS1LQ9Y4W2 734 aaKnown RBP22.48■■□□□ 1.19
AP1S3-207ENST00000444408 PHF14O94880 888 aa22.47■■□□□ 1.19
AP1S3-207ENST00000444408 CYP19A1P11511 503 aaPredicted RBP22.47■■□□□ 1.19
AP1S3-207ENST00000444408 COL23A1Q86Y22 540 aaPredicted RBP22.47■■□□□ 1.19
AP1S3-207ENST00000444408 TSPYL4Q9UJ04 414 aa22.47■■□□□ 1.19
AP1S3-207ENST00000444408 KDM3BQ7LBC6 1761 aa22.47■■□□□ 1.19
AP1S3-207ENST00000444408 INTS5Q6P9B9 1019 aaKnown RBP22.46■■□□□ 1.19
AP1S3-207ENST00000444408 VSIG10Q8N0Z9 540 aa22.46■■□□□ 1.19
AP1S3-207ENST00000444408 CNTNAP4Q9C0A0 1308 aa22.46■■□□□ 1.19
AP1S3-207ENST00000444408 CICQ96RK0 1608 aaPredicted RBP22.46■■□□□ 1.19
AP1S3-207ENST00000444408 ZBTB7AO95365 584 aa22.45■■□□□ 1.18
AP1S3-207ENST00000444408 EIF4A1P60842 406 aaKnown RBP22.45■■□□□ 1.18
AP1S3-207ENST00000444408 MYH14Q7Z406 1995 aaKnown RBP22.45■■□□□ 1.18
AP1S3-207ENST00000444408 CHL1O00533 1208 aa22.44■■□□□ 1.18
AP1S3-207ENST00000444408 RC3H1Q5TC82 1133 aaKnown RBP22.44■■□□□ 1.18
AP1S3-207ENST00000444408 WWC1Q8IX03 1113 aa22.44■■□□□ 1.18
AP1S3-207ENST00000444408 USP16Q9Y5T5 823 aa22.44■■□□□ 1.18
AP1S3-207ENST00000444408 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.43■■□□□ 1.18
AP1S3-207ENST00000444408 MSH5O43196 834 aa22.43■■□□□ 1.18
AP1S3-207ENST00000444408 KRT24Q2M2I5 525 aa22.43■■□□□ 1.18
AP1S3-207ENST00000444408 CCDC87Q9NVE4 849 aa22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms