RNA–Protein interactions for RNA: ENST00000443908.5

SF1-210, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-210ENST00000443908 HTATSF1O43719 755 aaKnown RBP17.58■□□□□ 0.4
SF1-210ENST00000443908 TATP17735 454 aaPredicted RBP17.58■□□□□ 0.4
SF1-210ENST00000443908 PLEKHO1Q53GL0 409 aaPredicted RBP17.58■□□□□ 0.4
SF1-210ENST00000443908 CALD1Q05682 793 aaKnown RBP17.57■□□□□ 0.4
SF1-210ENST00000443908 RGPD3A6NKT7 1758 aaPredicted RBP17.57■□□□□ 0.4
SF1-210ENST00000443908 RGPD4Q7Z3J3 1758 aa17.57■□□□□ 0.4
SF1-210ENST00000443908 MAP3K5Q99683 1374 aa17.56■□□□□ 0.4
SF1-210ENST00000443908 E9PSI1 815 aa17.56■□□□□ 0.4
SF1-210ENST00000443908 GPR162Q16538 588 aa17.56■□□□□ 0.4
SF1-210ENST00000443908 LRRC4BQ9NT99 713 aa17.56■□□□□ 0.4
SF1-210ENST00000443908 PRIM1P49642 420 aaKnown RBP17.55■□□□□ 0.4
SF1-210ENST00000443908 SLFN5Q08AF3 891 aa17.55■□□□□ 0.4
SF1-210ENST00000443908 ZNF827Q17R98 1081 aa17.55■□□□□ 0.4
SF1-210ENST00000443908 TRMT2AQ8IZ69 625 aaKnown RBP17.55■□□□□ 0.4
SF1-210ENST00000443908 ZNF784Q8NCA9 323 aaPredicted RBP17.55■□□□□ 0.4
SF1-210ENST00000443908 TFCP2L1Q9NZI6 479 aa17.55■□□□□ 0.4
SF1-210ENST00000443908 WNK3Q9BYP7 1800 aa17.55■□□□□ 0.4
SF1-210ENST00000443908 POLD1P28340 1107 aa17.54■□□□□ 0.4
SF1-210ENST00000443908 KCNQ4P56696 695 aa17.54■□□□□ 0.4
SF1-210ENST00000443908 PELP1Q8IZL8 1130 aaKnown RBP17.54■□□□□ 0.4
SF1-210ENST00000443908 SGIP1Q9BQI5 828 aa17.54■□□□□ 0.4
SF1-210ENST00000443908 SPG7Q9UQ90 795 aa17.54■□□□□ 0.4
SF1-210ENST00000443908 ADAMTS7Q9UKP4 1686 aa17.54■□□□□ 0.4
SF1-210ENST00000443908 CASZ1Q86V15 1759 aa17.53■□□□□ 0.4
SF1-210ENST00000443908 GNAT3A8MTJ3 354 aa17.53■□□□□ 0.4
SF1-210ENST00000443908 AKAP4Q5JQC9 854 aa17.53■□□□□ 0.4
SF1-210ENST00000443908 SLC27A3Q5K4L6 730 aa17.53■□□□□ 0.4
SF1-210ENST00000443908 CDCA7LQ96GN5 454 aa17.53■□□□□ 0.4
SF1-210ENST00000443908 MSH5O43196 834 aa17.52■□□□□ 0.4
SF1-210ENST00000443908 DUSP27Q5VZP5 1158 aa17.52■□□□□ 0.4
SF1-210ENST00000443908 ZNF530Q6P9A1 599 aaPredicted RBP17.52■□□□□ 0.4
SF1-210ENST00000443908 ZCRB1Q8TBF4 217 aaKnown RBP17.52■□□□□ 0.4
SF1-210ENST00000443908 SLC16A10Q8TF71 515 aa17.51■□□□□ 0.39
SF1-210ENST00000443908 RTF1Q92541 710 aaKnown RBP17.51■□□□□ 0.39
SF1-210ENST00000443908 AKT1S1Q96B36 256 aa17.51■□□□□ 0.39
SF1-210ENST00000443908 MYH16Q9H6N6 1097 aa17.51■□□□□ 0.39
SF1-210ENST00000443908 CEMIPQ8WUJ3 1361 aa17.51■□□□□ 0.39
SF1-210ENST00000443908 C1orf141Q5JVX7 400 aa17.5■□□□□ 0.39
SF1-210ENST00000443908 SPINK5Q9NQ38 1064 aaPredicted RBP17.5■□□□□ 0.39
SF1-210ENST00000443908 IFT57Q9NWB7 429 aa17.49■□□□□ 0.39
SF1-210ENST00000443908 SHANK3Q9BYB0 1731 aa17.49■□□□□ 0.39
SF1-210ENST00000443908 PCDH11XQ9BZA7 1347 aa17.48■□□□□ 0.39
SF1-210ENST00000443908 PCDH11YQ9BZA8 1340 aa17.48■□□□□ 0.39
SF1-210ENST00000443908 ZNF853P0CG23 659 aa17.48■□□□□ 0.39
SF1-210ENST00000443908 GNAI1P63096 354 aa17.48■□□□□ 0.39
SF1-210ENST00000443908 HSP90AB1P08238 724 aaKnown RBP17.47■□□□□ 0.39
SF1-210ENST00000443908 PHKG2P15735 406 aa17.47■□□□□ 0.39
SF1-210ENST00000443908 IFNL2Q8IZJ0 200 aa17.47■□□□□ 0.39
SF1-210ENST00000443908 CFAP44Q96MT7 982 aa17.47■□□□□ 0.39
SF1-210ENST00000443908 CCNL1Q9UK58 526 aaPredicted RBP17.47■□□□□ 0.39
SF1-210ENST00000443908 NHSQ6T4R5 1651 aa17.47■□□□□ 0.39
SF1-210ENST00000443908 MRC1P22897 1456 aa17.46■□□□□ 0.39
SF1-210ENST00000443908 DCTN1Q14203 1278 aa17.46■□□□□ 0.39
SF1-210ENST00000443908 MCM10Q7L590 875 aa17.46■□□□□ 0.39
SF1-210ENST00000443908 THUMPD2Q9BTF0 503 aaKnown RBP17.46■□□□□ 0.39
SF1-210ENST00000443908 BABAM1Q9NWV8 329 aa17.46■□□□□ 0.39
SF1-210ENST00000443908 PNPLA7Q6ZV29 1317 aa17.46■□□□□ 0.38
SF1-210ENST00000443908 FANCIQ9NVI1 1328 aa17.46■□□□□ 0.38
SF1-210ENST00000443908 IL17REQ8NFR9 667 aa17.45■□□□□ 0.38
SF1-210ENST00000443908 KDM6AO15550 1401 aaPredicted RBP17.45■□□□□ 0.38
SF1-210ENST00000443908 SCN11AQ9UI33 1791 aa17.44■□□□□ 0.38
SF1-210ENST00000443908 CYP27B1O15528 508 aa17.44■□□□□ 0.38
SF1-210ENST00000443908 RNMTO43148 476 aaKnown RBP17.44■□□□□ 0.38
SF1-210ENST00000443908 BTAF1O14981 1849 aa17.44■□□□□ 0.38
SF1-210ENST00000443908 CHL1O00533 1208 aa17.43■□□□□ 0.38
SF1-210ENST00000443908 CT47B1P0C2W7 299 aaPredicted RBP17.43■□□□□ 0.38
SF1-210ENST00000443908 NKX1-1Q15270 411 aaPredicted RBP17.43■□□□□ 0.38
SF1-210ENST00000443908 DCAF5Q96JK2 942 aa17.43■□□□□ 0.38
SF1-210ENST00000443908 SIPA1L3O60292 1781 aaPredicted RBP17.42■□□□□ 0.38
SF1-210ENST00000443908 C1QTNF8P60827 252 aa17.41■□□□□ 0.38
SF1-210ENST00000443908 NLGN2Q8NFZ4 835 aa17.41■□□□□ 0.38
SF1-210ENST00000443908 VIRMAQ69YN4 1812 aaKnown RBP17.41■□□□□ 0.38
SF1-210ENST00000443908 TAF7Q15545 349 aaPredicted RBP17.4■□□□□ 0.38
SF1-210ENST00000443908 MSL1Q68DK7 614 aa17.4■□□□□ 0.38
SF1-210ENST00000443908 MPRIPQ6WCQ1 1025 aa17.4■□□□□ 0.38
SF1-210ENST00000443908 COL23A1Q86Y22 540 aaPredicted RBP17.4■□□□□ 0.38
SF1-210ENST00000443908 LGR6Q9HBX8 967 aa17.4■□□□□ 0.38
SF1-210ENST00000443908 MBIPQ9NS73 344 aa17.4■□□□□ 0.38
SF1-210ENST00000443908 KDM3BQ7LBC6 1761 aa17.39■□□□□ 0.37
SF1-210ENST00000443908 TEFQ10587 303 aa17.39■□□□□ 0.37
SF1-210ENST00000443908 TSR2Q969E8 191 aaKnown RBP17.39■□□□□ 0.37
SF1-210ENST00000443908 HMGB2P26583 209 aaKnown RBP17.38■□□□□ 0.37
SF1-210ENST00000443908 RCAN3Q9UKA8 241 aa17.38■□□□□ 0.37
SF1-210ENST00000443908 LAS1LQ9Y4W2 734 aaKnown RBP17.38■□□□□ 0.37
SF1-210ENST00000443908 UTRNP46939 3433 aa17.38■□□□□ 0.37
SF1-210ENST00000443908 ERVV-2B6SEH9 535 aa17.37■□□□□ 0.37
SF1-210ENST00000443908 GRIN3BO60391 1043 aa17.37■□□□□ 0.37
SF1-210ENST00000443908 ZNF428Q96B54 188 aa17.37■□□□□ 0.37
SF1-210ENST00000443908 SLC52A2Q9HAB3 445 aa17.37■□□□□ 0.37
SF1-210ENST00000443908 TSPYL4Q9UJ04 414 aa17.37■□□□□ 0.37
SF1-210ENST00000443908 SOS1Q07889 1333 aaPredicted RBP17.37■□□□□ 0.37
SF1-210ENST00000443908 PAPPAQ13219 1627 aa17.36■□□□□ 0.37
SF1-210ENST00000443908 GIGYF1O75420 1035 aaPredicted RBP17.36■□□□□ 0.37
SF1-210ENST00000443908 EXOSC9Q06265 439 aaKnown RBP17.36■□□□□ 0.37
SF1-210ENST00000443908 RNF123Q5XPI4 1314 aa17.36■□□□□ 0.37
SF1-210ENST00000443908 TOGARAM1Q9Y4F4 1720 aa17.35■□□□□ 0.37
SF1-210ENST00000443908 FLAD1Q8NFF5 587 aa17.35■□□□□ 0.37
SF1-210ENST00000443908 CHD4Q14839 1912 aa17.34■□□□□ 0.37
SF1-210ENST00000443908 BTBD11A6QL63 1104 aa17.32■□□□□ 0.36
SF1-210ENST00000443908 YBX3P16989 372 aaKnown RBP eCLIP17.32■□□□□ 0.368e-20■■■□□ 19.1
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms